U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    CG3817 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41805, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG3817provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038275
    Locus tag
    Dmel_CG3817
    See related
    AllianceGenome:FB:FBgn0038275
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG3817; RRP15
    Summary
    Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to be part of preribosome, large subunit precursor. Is expressed in adult head. Orthologous to human RRP15 (ribosomal RNA processing 15 homolog). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CG3817 in Genome Data Viewer
    Location:
    88D6-88D6; 3-56 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (14898739..14899617)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (10724461..10725339)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Diphthamide biosynthesis 2 Neighboring gene uncharacterized protein Neighboring gene Nucleoporin 93kD-2 Neighboring gene Vacuolar H[+] ATPase PPA1 subunit 2 Neighboring gene Ribosomal protein S5b Neighboring gene Vacuolar H[+] ATPase PPA1 subunit 1

    Genomic regions, transcripts, and products

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in maturation of 5.8S rRNA  
    involved_in maturation of LSU-rRNA  
    involved_in rRNA processing  
    Component Evidence Code Pubs
    part_of preribosome, large subunit precursor  

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG3817-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      14898739..14899617
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142148.4NP_650405.2  uncharacterized protein Dmel_CG3817 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650405.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95T28, Q9VFE6
      UniProtKB/TrEMBL
      B5RJG4
      Related
      FBpp0082462
      Conserved Domains (1) summary
      pfam07890
      Location:105198
      Rrp15p; Rrp15p
    External link. Please review our privacy policy.