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FKF1 flavin-binding, kelch repeat, f box 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843133, updated on 18-Sep-2024

Summary

Official Symbol
FKF1
Official Full Name
flavin-binding, kelch repeat, f box 1
Primary source
TAIR:AT1G68050
Locus tag
AT1G68050
See related
Araport:AT1G68050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''flavin-binding; ADO3; f box 1; f box 1''; flavin-binding; kelch repeat; T23K23.10; T23K23_10
Summary
Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression.
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Genomic context

See FKF1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (25508639..25510907)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase / trehalose-phosphatase family protein Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene microtubule-associated proteins 70-1 Neighboring gene Zinc finger, C3HC4 type (RING finger) family protein Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene annexin 5

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

General gene information

NM_105475.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus  

General protein information

Preferred Names
flavin-binding, kelch repeat, f box 1
NP_564919.1
  • ''flavin-binding, kelch repeat, f box 1'' (FKF1); FUNCTIONS IN: ubiquitin-protein ligase activity, signal transducer activity; INVOLVED IN: response to blue light, positive regulation of flower development, circadian rhythm, ubiquitin-dependent protein catabolic process, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: whole plant, root tip, male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Kelch repeat type 2 (InterPro:IPR011498), F-box domain, Skp2-like (InterPro:IPR022364), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G57360.1); Has 8646 Blast hits to 5789 proteins in 832 species: Archae - 91; Bacteria - 2197; Metazoa - 2116; Fungi - 922; Plants - 2047; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    25508639..25510907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105475.4NP_564919.1  flavin-binding, kelch repeat, f box 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564919.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C9W9, Q9M648
    UniProtKB/TrEMBL
    A0A178W8F6, A0A5S9WQF2, A0A654EM32
    Conserved Domains (5) summary
    PLN02193
    Location:292595
    PLN02193; nitrile-specifier protein
    PRK05784
    Location:269
    PRK05784; phosphoribosylamine--glycine ligase; Provisional
    PRK13558
    Location:53163
    PRK13558; bacterio-opsin activator; Provisional
    sd00038
    Location:305353
    Kelch; KELCH repeat [structural motif]
    pfam12937
    Location:211256
    F-box-like
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