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Submitted SNP(ss) Details: ss162980613           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_555353
RefSNP(rs#)rs7349153
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162980613|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TCCTCTTCAA CAATATACTC TCCGGACAAT GAACCATAAC CAATACCACC AATCAATACT
 CATCATTAAT AATCATAATG GCTATAGCAA TAAAACTAGG AATAGCCCCC TTTCACTTCT
 GAGTCCCAGA GGTTACCCAA GGCACCCCTC TGACATCCGG CCTGCTCCTT CTCACATGAC
 AAAAACTAGC CCCCATCTCA ATCATATACC AAATTTCTCC CTCATTAAAC GTAAGCCTTC
 TCCTCACTCT
 Y
 TCAATCTTAT CCATCATGGC AGGCAGTTGA GGTGGATTAA ACCAAACCCA ACTACGCAAA
 ATCTTAGCAT ACTCCTCAAT TACCCACATA GGATGAATAA CAGCAGTTCT ACCGTACAAC
 CCTAACATAA CCATTCTTAA TTTAACTATT TATATTATCC TAACTACTAC CGCATTCCTA
 CTACTCAACT TAAACTCCAG CACCACAACC CTACTACTAT CTCGCACCTG AAACAAGCTA
 ACATGACTAA

  Submitted Frequency for ss162980613 back to top
There is no frequency submission for ss162980613.


  dbSNP summary of Genotypes for ss162980613 back to top
No sufficient data to compute Hardy-weinberg probability for ss162980613.


  Submitted individual genotype for ss162980613 back to top
There is no individual genotype data for ss162980613.

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