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Submitted SNP(ss) Details: ss171805779           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA20431_36_chr21_9719964
RefSNP(rs#)rs28971139
Submitted Batch IDNA20431_snpassay_chr21
Submitted DateOct 01, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPOct 1 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss171805779|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNAATTCT
 GAGAAACTTC TTTGTGAGGG TTGGATTCAT TTCACACATT TGAACATTTC TTTGATTGAA
 GATTTGGAAA CAGTCTTTTT GTAAAATCTA TAAAGGGATA ATTGTGAACC CTTTGAGGCC
 TAGGGTGAAG TAGGAAATAT CTTCACATAA AAACTACACA GAAATTTTCT GAGAAACGTT
 TTAGTGATGC
 R
 TGCATTCATC TCACAGAGTT GAACCTTTCC TTTGCTAGAG CACTTTGGAA ACAGTCCTAT
 TGTAGAATCC CCAAAGGAAT ACTTCTCAGC CGATTGAGGC CTTTGGTGAT ATTGGAAATA
 TCTTCACATA AAAGCTAGAC AGAAACTTTC TGAGAAACTT ATTTTTAATG AGTGCTCTCA
 TCTCAAAGAG TTAAGTGTTT CTTTTGAATG AGCAGTTTGG AAACACTCTT TTTGCATAAT
 CTGCAAATGG

  Submitted Frequency for ss171805779 back to top
There is no frequency submission for ss171805779.


  dbSNP summary of Genotypes for ss171805779 back to top
No sufficient data to compute Hardy-weinberg probability for ss171805779.


  Submitted individual genotype for ss171805779 back to top
There is no individual genotype data for ss171805779.

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