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Submitted SNP(ss) Details: ss162830135           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA07022_36_chr3_173641091
RefSNP(rs#)rs1403637
Submitted Batch IDNA07022_snpassay_chr3
Submitted DateSep 28, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 28 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss162830135|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TTAACTCATT ATTAAATATT GGAGCCTTTG GGGAAATAAA ATTTACTACA ACAAACACCT
 CCTCATAGGT GCAAAATACA TATTTCTGGA ATTAAAAGGA AAAAATAGAA CTAAATCTGA
 GACAAGAGTA GAGGTAAAAT ATTCCAGACA CCAAGTTTTG TAACTAAGTG GAAGAAGTCA
 GCCATATGCT TTAAAAATAC ATTTATTAGG CAATTGTTTG GTTGAGAACA CTCAAAGGAA
 GGAATACCTA
 Y
 GTGTAGTTGC ATACAACAGG TACATGAAAG CTATCGTAAA CTCTTCATTG ACATTCAGAA
 AAATCCCTAA AGAAAAAGAA TTGCAAATCA AAACATCATC AGTAACATCT ATGACAAATC
 AACCAAGTAT GAAATTCTAT GCAGATATGG AATACCTCAT ATATCAGTGA AACAGGGGAC
 TAGGCTGTTT GGACATATAT ATACGAACAA GTGTTTTTCT TTTTCCTTCC TTTTTTTTTT
 TTTTTTTTTG

  Submitted Frequency for ss162830135 back to top
There is no frequency submission for ss162830135.


  dbSNP summary of Genotypes for ss162830135 back to top
No sufficient data to compute Hardy-weinberg probability for ss162830135.


  Submitted individual genotype for ss162830135 back to top
There is no individual genotype data for ss162830135.

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