>gnl|dbSNP|ss3327485|allelePos=422|len=921|taxid=9606|alleles='C/T'|mol=Genomic
CTTTAGTTTT TGCTCCTCAA ATTGGAATAA TGATAGAATG AGAGTACTAA AACCCCCACA
ACTGGCCCTA CATGAATGGC CAGCTATCTC AAAAGAGGGA CTGTGCTTGT CAGAGGGAAT
CCCTTCAGGG GACTCTTGGA CAGGTTAAAG TGCCATGGAT ATGTTGTGTA ATGGGAAGTG
TAAACTTACA GGGACTTGAT TTCAAAGGTC ATTAGAGAAG TTAGCCACAA CTTCTAAAGC
AACTATCAGA AAACAGCTTG GACTCACTCA AGTAAACAGG GGCTTTATTG GCTTATAGAC
CTGGGCAGTC CAGGTGTAGA TCTGGTTCCA GACAAGGCTG ATTCAGAGAC TCCACGTGGT
CAAGGCTCTG TTGTTTGTCA ATCCCTTGGC TCCTCCACTT CCAGTTTGGC TTCTGTCCTC
A
Y
AGTCTCTCTC CATGTGGCAA ACAAGATGGC TACTGGTGGT CCCAGGTTCA CGTCCTCTCA
GCTTGGAAAT CCAGCAGCAA GAAGATGTCT CACTCCCAAA GTCCATAACT CAATCCTTGG
GAAGACTGTA GTTGGTCCTG CTAGGAACAC GTAACTATCC AACTATCCTC CAGATAGGGA
GCTGGGGAGA TGGGAGATGG GCTCCTCTGA CAGGACACCC TGTGGTTCAC GTCCACTCTT
GTGGCCTGGG TATATTGGGA ATGCGGGGAT GAAGAAAGAA TTCACAGCCC CACAAGGTTC
GTGTGGAAAA GGGGAGGAGT TTCCCAGAAG AGCCATAAAA TTAAGAAAGC ACTGCAAGCA
AACAAAAACC AGTCATTTAA GTTCTTGGCA GTAACAACAT ATTTATACCT AGTGCTTCAT
TTTGCTCTGG AAAAAAAGCA GATCTGCTCT GCTGGGGCAA TTCTAATGGC CTTTCCAGTG
TGCTTTGAGA AAGTGGAGG
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | C=0.65929204
| T=0.34070796 | C/T=0.45132744
C/C=0.43362832
T/T=0.11504425
| Pr(chiSq=0.002,df=1)
=1.000 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | T=0.58139533
| C=0.41860464 | C/T=0.51162791
T/T=0.32558140
C/C=0.16279070
| Pr(chiSq=0.112,df=1)
=0.752 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | T=0.70348835
| C=0.29651162 | T/T=0.51162791
C/T=0.38372093
C/C=0.10465116
| Pr(chiSq=0.553,df=1)
=0.479 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | C=0.84955752
| T=0.15044248 | C/C=0.69911504
C/T=0.30088496
| Pr(chiSq=0.986,df=1)
=0.343 | Genotype
Freq. |
CABG_NORTHAMERICAN
- NORTH AMERICA | 2148 | 2148 | C=0.65223461
| T=0.34776536 | C/T=0.44599628
C/C=0.42923650
T/T=0.12476723
| Pr(chiSq=0.306,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | C=0.73469388
| T=0.26530612 | C/C=0.57142860
C/T=0.32653061
T/T=0.10204082
| Pr(chiSq=1.292,df=1)
=0.273 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.53658539
| T=0.46341464 | C/T=0.48780489
C/C=0.29268292
T/T=0.21951219
| Pr(chiSq=0.015,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | T=0.50588238
| C=0.49411765 | C/T=0.54117650
T/T=0.23529412
C/C=0.22352941
| Pr(chiSq=0.579,df=1)
=0.479 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | C=0.61363637
| T=0.38636363 | C/T=0.43181819
C/C=0.39772728
T/T=0.17045455
| Pr(chiSq=0.702,df=1)
=0.403 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | C=0.82777780
| T=0.17222223 | C/C=0.68888891
C/T=0.27777779
T/T=0.03333334
| Pr(chiSq=0.060,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | C=0.62000000
| T=0.38000000 | C/T=0.51999998
C/C=0.36000001
T/T=0.12000000
| Pr(chiSq=0.536,df=1)
=0.479 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | C=0.82517481
| T=0.17482518 | C/C=0.69230771
C/T=0.26573426
T/T=0.04195804
| Pr(chiSq=0.892,df=1)
=0.371 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | C=0.70454544
| T=0.29545453 | C/C=0.54545456
C/T=0.31818181
T/T=0.13636364
| Pr(chiSq=4.890,df=1)
=0.050 | Genotype
Freq. |
