NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss4288683           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC1650454
RefSNP(rs#)rs3057402
Submitted Batch IDTSC-CSHL-31_101110816
Submitted DateNov 09, 2001
Publication CitedN.D.
First entry to dbSNPNov 9 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
GENOMIC
MethodTSC-CSHL-31
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed Allele-/AAAAA
Ancestral Allele
Allele OriginN/A
SNP ClassDIV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss4288683|allelePos=490|len=981|taxid=9606|alleles='-/AAAAA'|mol=Genomic
 agcctggacg aaagaacgag actctgtctc aaaaacattc aaatataaat acaaaaatta
 gctgggcatg gtggcatgtg cctctaatcc tagctacttg ggaggctgag gcacaagaat
 tgcttgaacc tgggaagtca gaggcggaga ctgcagtgag cagaCTGCTT CACAATTATC
 GTTAGTTCTT GCTCTGCTTC ATTTCATTTT GTTTTTCTAT TGGACTTTAG GTGTAGAACT
 GTACATTGAA AGAGATGAAT TTTTAAAATG TAAACAGATA AAGAAATTTG CTTCCAAAAA
 ATGCTGTGGG Agccaggaat ggtagtatga acctgtagtc ccagctacct gggagactga
 ggcaggaaga ttgcttgaga ccatgaattt gaagctgtag tatactacga ccacatctgt
 aaatagcaac tgtactctag tagctgtaca acatagcaag acctcgtctc tttaaaaaaa
 aaaaaaaaa
 N
 GTGCGGACAG AGAGTGGTTG ATGGAATTAT AAACCAAGAT AGGTCCTGAT TTTGGGGTGT
 TTTTTTTTTA AGCTGGATGA TAGACACATG GGATAAAGGA GGTGATGGAA TCTTTATACC
 ATTCTCTCTG CTTTTGTTTT ATGCCTGTCA TTTTCAATTA AAGTTAAAAA ATGATGGAAA
 GAAAATTAAA CAATAGTTTC CTTCACAAAT CTCTTCCTCT GATGCTCCCC TGATGTTGCA
 GCTGGGGAAA CAGAGATGGT ATTTCTTCCC TAGAGCCGCT GCAGGGCTTC AGTTCCAATG
 GAGCCTAAGG TTGTTACTAT TATCTGCAGA GTACTGTCAC TGTTGTCTGA CCTTCAATAA
 GTCACAACAA TAATTTTGGG TTACATCAAA TTCTGAGCCT TTAAGGATCT TAAAGTACTT
 ACATATATGT TGTATCAGTA AGTTAAAAAT GCTATTGCCT ATAATAATTA TATTATCACT
 GGAACTGAAG A

  Submitted Frequency for ss4288683 back to top
There is no frequency submission for ss4288683.


  dbSNP summary of Genotypes for ss4288683 back to top
No sufficient data to compute Hardy-weinberg probability for ss4288683.


  Submitted individual genotype for ss4288683 back to top
There is no individual genotype data for ss4288683.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement