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Submitted SNP(ss) Details: ss80129838           
Submitter
HandleHGSV
Submitter SNP IDCor18507_DIV_20070510.chr6_58389434-58389437_1
RefSNP(rs#)rs61449721
Submitted Batch IDNA18507-Fosmids-20070510-DIPs
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/TT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize64855349 414-415 42 forward -2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80129838|allelePos=501|len=1001|taxid=9606|alleles='-/TT'|mol=Genomic
 GCTAACAGGG TGAAACCCTG TCTCTACTAA AAATACAAAA AAAAAAAAAA AAAATTAGCC
 AGGCATGGTG CCCGGTGCCT ATAGTCCCAG CTACTCAGGA GGCTGAGACA GGAGAATGGC
 GTGCACCCGG GAGGCGGAGC TTGCAGTGAG TCGAGATCAC ACCACTGCAC TCCAGTCTGG
 GCGACAGAGC GAGACTCTGT CTCAAAAATA TATATATATA TTTGGTCTTT GTTTCAGGTT
 CCTGCCACAC AGCTTCTGAA ACCCTTGGAA TTTCCTGAGT GATAGGAGCT GTCTTTTGTT
 ATTCATTAGA AGCCCCTTTG GATCCCACCT AAATTTATGC TATTGAAGTG ACTTAGTGTG
 GGATCCCTAG GCCTCAGGAT GGGACTGCTG CTCACTAAAA AAACTGACGG GTTAGATAAT
 TGGAACTTTC ATCCCCACCC ACCAATCTCT GGGGAAGCTG GAAATTAAGA TCTATAGAAA
 TTTTTTTTTT TTTTTTTTTT
 N
 GAGACAGGCT CTTGCTTTTT TACTCAGGCT GTGATGCAGT GGCATGATCA TAGCTCACTG
 CAGCCTCAAC CTCTGGGCTC AAGTGACCCT CTCACCTCAG CCTCCCAAGT AGTTGGGACT
 ACAGGTGTGC GCCGCCATGC CCAGCTAATT TTTATAAGAT TTTTTGAACG GGATCTCACT
 GTGTTAGCCC AGGTTTGTCT CAAACTCCTG GGATCAAGTG ATCCTCCTAC CTTGGTCCCC
 CAAAGTGCTG GGATTATAGG TGTGAGCCAC TGCACCCAGC CTAGACACTC CTGAACCACT
 AGATGTGATT AGCTTCAGGG TAGTTGAACA CAGGGGGATG CTGGGGAGTT GGTGCACCCA
 GAGAGGGCAC AGAAGCTCTG CACCTCTCCC ACCGCATACC TTGCCCAATG CATTACTTCA
 TCTGGCTGTT CATCTGTATC ATTTATAATA TTCTTTATAA TAAACTGTTA AACATAAGTA
 AAGTGTTTCC CTGTGAGCCG

  Submitted Frequency for ss80129838 back to top
There is no frequency submission for ss80129838.


  dbSNP summary of Genotypes for ss80129838 back to top
No sufficient data to compute Hardy-weinberg probability for ss80129838.


  Submitted individual genotype for ss80129838 back to top
There is no individual genotype data for ss80129838.

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