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Submitted SNP(ss) Details: ss80175147           
Submitter
HandleHGSV
Submitter SNP IDCor18507_DIV_20070510.chr1_71412186-71412197_1
RefSNP(rs#)rs59902893
Submitted Batch IDNA18507-Fosmids-20070510-DIPs
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/CACACACACA
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize65168858 174-175 59 forward -10

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80175147|allelePos=501|len=728|taxid=9606|alleles='-/CACACACACA'|mol=Genomic
 CCTTCCTTAT GGTTTACACA GCCCTGAGTA TTCTAGCTCC TGGGTCACCT TTTGACCTCA
 TCTTAAGGCA TTCTCCTCTA TCCCTAGGTT TCAGCCATCT GAGTCTTCGT CATTGTTTTA
 GTTTGTTTTG TTTAAAAATG TTAAACAATA TTCTTCTTAT TCCAAGACCT CCAGACATTC
 TGTTTTCTCT GCTTTAAAAC TCTCTTCTCT TCCTTTCCAT GTACTTTTAG ATTTTAGCTT
 TAATGCTGCT TTCTCAGGAA AGTTCCCCTT GTTATATATT CTCATGCTAA CCTTCACTTC
 TTTTTCATGA CACTTATAAT TATAATTAAT CATTTCAGGA ATAAGTACTC ACATGTCTGT
 CTCCACAAAT AAACTATAAA CTTCAAGAGA CGGAGAACTA TGTATGCTTA TTTGTTGTGC
 TATATCTTGT GGCTAGCACA GTGCCTGACA TATATACACA CACACACACA CACACACACA
 CACACACACA CACACACACA
 N
 TGATTAATAA ATGTTTGTTA AATGAGTAGT TGAATCCATG GATTATTTTT ATGTACGCTG
 TAGGTATGCC TTAATCCAAA GCATCAGTTT TCTAGTGGTA GCATTAAAGT CACCTAATAA
 CAGAGAAACA AGCATCTTTG AATGGAAATG AGCCTTTCTA GTATCCTTTA AGTTATATTA
 ATTAGGCAGT TACCTACTTT ATTTAAGCAG AATGTTATCT TTGTTGA

  Submitted Frequency for ss80175147 back to top
There is no frequency submission for ss80175147.


  dbSNP summary of Genotypes for ss80175147 back to top
No sufficient data to compute Hardy-weinberg probability for ss80175147.


  Submitted individual genotype for ss80175147 back to top
There is no individual genotype data for ss80175147.

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