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    c10h17orf67 chromosome 10 C17orf67 homolog [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100127729, updated on 9-Dec-2024

    Summary

    Official Symbol
    c10h17orf67provided by Xenbase
    Official Full Name
    chromosome 10 C17orf67 homologprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-5887101
    See related
    Ensembl:ENSXETG00000030738 AllianceGenome:Xenbase:XB-GENE-5887101
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    c17orf67
    Summary
    Human ortholog(s) of this gene implicated in Behcet's disease; immunodeficiency 32A; immunodeficiency 32B; multiple myeloma; and systemic lupus erythematosus. Orthologous to human IRF8 (interferon regulatory factor 8). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See c10h17orf67 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (26106503..26127392, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (18263707..18285300, complement)

    Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and fibronectin type III domain containing 1 Neighboring gene U2 spliceosomal RNA Neighboring gene noggin Neighboring gene uncharacterized LOC105945278 Neighboring gene uncharacterized LOC116407950 Neighboring gene diacylglycerol kinase epsilon

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    uncharacterized protein C17orf67 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001113068.1NP_001106539.1  uncharacterized protein C17orf67 homolog precursor

      See identical proteins and their annotated locations for NP_001106539.1

      Status: PROVISIONAL

      Source sequence(s)
      BC154910
      UniProtKB/TrEMBL
      A8WGZ3, F6T7Q9
      Related
      ENSXETP00000063670.1, ENSXETT00000060474.3
      Conserved Domains (1) summary
      pfam15076
      Location:1790
      DUF4543; Domain of unknown function (DUF4543)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      26106503..26127392 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)