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    LOC112272879 heavy metal-associated isoprenylated plant protein 4-like [ Physcomitrium patens ]

    Gene ID: 112272879, updated on 20-Sep-2024

    Summary

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    Gene symbol
    LOC112272879
    Gene description
    heavy metal-associated isoprenylated plant protein 4-like
    Locus tag
    PHYPA_024357
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Physcomitrium patens
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium
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    Genomic context

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    See LOC112272879 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Phypa V3 (GCF_000002425.4) 19 NC_037271.1 (13408198..13410180, complement)

    Chromosome 19 - NC_037271.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112272789 Neighboring gene hexokinase-1-like Neighboring gene uncharacterized LOC112272737 Neighboring gene E3 ubiquitin-protein ligase KEG-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037271.1 Chromosome 19 Reference Phypa V3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heavy metal-associated isoprenylated plant protein 4-like; uncharacterized protein LOC112272879

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Physcomitrella patens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Phypa V3 Primary Assembly

    Genomic

    1. NC_037271.1 Reference Phypa V3 Primary Assembly

      Range
      13408198..13410180 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024501054.1 → XP_024356822.1  uncharacterized protein LOC112272879 isoform X1

      UniProtKB/TrEMBL
      A0A2K1IZ36
      Conserved Domains (1) summary
      pfam00403
      Location:44 → 94
      HMA; Heavy-metal-associated domain

    2. XM_024501056.1 → XP_024356824.1  heavy metal-associated isoprenylated plant protein 4-like isoform X2

      UniProtKB/TrEMBL
      A0A7I4BTX9
      Conserved Domains (1) summary
      pfam00403
      Location:25 → 75
      HMA; Heavy-metal-associated domain

    3. XM_024501055.1 → XP_024356823.1  heavy metal-associated isoprenylated plant protein 4-like isoform X2

      UniProtKB/TrEMBL
      A0A7I4BTX9
      Conserved Domains (1) summary
      pfam00403
      Location:25 → 75
      HMA; Heavy-metal-associated domain
    Nucleotide Protein
    Heading Accession and Version

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