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    KIN Kin17 DNA and RNA binding protein [ Pipistrellus kuhlii (Kuhl's pipistrelle) ]

    Gene ID: 118732236, updated on 30-Mar-2024

    Summary

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    Gene symbol
    KIN
    Gene description
    Kin17 DNA and RNA binding protein
    Locus tag
    mPipKuh1_007211
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pipistrellus kuhlii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus
    Orthologs
    human mouse all
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    Genomic context

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    See KIN in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current mPipKuh1.p (GCF_014108245.1) Unplaced Scaffold NW_023425404.1 (119253299..119291602, complement)

    NW_023425404.1Genomic Context describing neighboring genes Neighboring gene inter-alpha-trypsin inhibitor heavy chain 5 Neighboring gene inter-alpha-trypsin inhibitor heavy chain 2 Neighboring gene ATP synthase F1 subunit gamma Neighboring gene TATA-box binding protein associated factor 3 Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene GATA binding protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023425404 Unplaced Scaffold Reference mPipKuh1.p

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA/RNA-binding protein KIN17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pipistrellus kuhlii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mPipKuh1.p

    Genomic

    1. NW_023425404.1 Reference mPipKuh1.p

      Range
      119253299..119291602 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036461372.2 → XP_036317265.1  DNA/RNA-binding protein KIN17 isoform X2

      Conserved Domains (3) summary
      cd13155
      Location:357 → 410
      KOW_KIN17; KOW_Kin17 is a RNA-binding motif
      pfam10357
      Location:129 → 196
      Kin17_mid; Domain of Kin17 curved DNA-binding protein
      pfam18131
      Location:294 → 346
      KN17_SH3; KN17 SH3-like C-terminal domain

    2. XM_036461366.2 → XP_036317259.1  DNA/RNA-binding protein KIN17 isoform X1

      Conserved Domains (3) summary
      cd13155
      Location:398 → 451
      KOW_KIN17; KOW_Kin17 is a RNA-binding motif
      pfam10357
      Location:129 → 237
      Kin17_mid; Domain of Kin17 curved DNA-binding protein
      pfam18131
      Location:335 → 387
      KN17_SH3; KN17 SH3-like C-terminal domain

    3. XM_036461382.1 → XP_036317275.1  DNA/RNA-binding protein KIN17 isoform X4

      Conserved Domains (3) summary
      cd13155
      Location:326 → 379
      KOW_KIN17; KOW_Kin17 is a RNA-binding motif
      pfam10357
      Location:112 → 165
      Kin17_mid; Domain of Kin17 curved DNA-binding protein
      pfam18131
      Location:263 → 315
      KN17_SH3; KN17 SH3-like C-terminal domain

    4. XM_036461395.2 → XP_036317288.1  DNA/RNA-binding protein KIN17 isoform X6

      Conserved Domains (5) summary
      smart00451
      Location:25 → 54
      ZnF_U1; U1-like zinc finger
      cd13155
      Location:297 → 350
      KOW_KIN17; KOW_Kin17 is a RNA-binding motif
      sd00020
      Location:28 → 50
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam10357
      Location:55 → 136
      Kin17_mid; Domain of Kin17 curved DNA-binding protein
      pfam18131
      Location:234 → 286
      KN17_SH3; KN17 SH3-like C-terminal domain

    5. XM_036461374.1 → XP_036317267.1  DNA/RNA-binding protein KIN17 isoform X3

      UniProtKB/TrEMBL
      A0A7J8B1D6
      Conserved Domains (4) summary
      smart00451
      Location:25 → 54
      ZnF_U1; U1-like zinc finger
      cd13155
      Location:338 → 391
      KOW_KIN17; KOW_Kin17 is a RNA-binding motif
      pfam10357
      Location:55 → 177
      Kin17_mid; Domain of Kin17 curved DNA-binding protein
      pfam18131
      Location:275 → 327
      KN17_SH3; KN17 SH3-like C-terminal domain

    6. XM_045588626.1 → XP_045444582.1  DNA/RNA-binding protein KIN17 isoform X5

    RNA

    1. XR_004992107.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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