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    abu-13 Activated in Blocked Unfolded protein response [ Caenorhabditis elegans ]

    Gene ID: 175970, updated on 18-Sep-2024

    Summary

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    Official Symbol
    abu-13
    Official Full Name
    Activated in Blocked Unfolded protein response
    Primary source
    WormBase:WBGene00004133
    Locus tag
    CELE_F57B9.9
    See related
    AllianceGenome:WB:WBGene00004133
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See abu-13 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    7
    Sequence:
    Chromosome: III; NC_003281.10 (6941888..6945898, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Cell adhesion protein byn-1 Neighboring gene Tyrosine-protein kinase Neighboring gene 4-hydroxybenzoate polyprenyltransferase, mitochondrial Neighboring gene RNA helicase Neighboring gene ncRNA Neighboring gene CCR4-NOT transcription complex subunit let-711 Neighboring gene putative 26S proteasome regulatory subunit rpn-6.1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Neuronal GPCR controls innate immunity by regulating noncanonical unfolded protein response genes. Sun J, et al. Science, 2011 May 6. PMID 21474712, Free PMC Article
    2. Gene regulatory network inference in long-lived C. elegans reveals modular properties that are predictive of novel aging genes. Suriyalaksh M, et al. iScience, 2022 Jan 21. PMID 35036864, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Activated in Blocked Unfolded protein response
    NP_001309502.1
    • Product from WormBase gene class abu;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6941888..6945898 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001322632.2 → NP_001309502.1  Activated in Blocked Unfolded protein response [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20936
      Conserved Domains (1) summary
      PHA03247
      Location:25 → 138
      PHA03247; large tegument protein UL36; Provisional
    Nucleotide Protein
    Heading Accession and Version

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