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    SODALDRAFT_362931 hypothetical protein [ Sodiomyces alkalinus F11 ]

    Gene ID: 39582989, updated on 21-Dec-2023

    Summary

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    Gene symbol
    SODALDRAFT_362931
    Gene description
    hypothetical protein
    Locus tag
    SODALDRAFT_362931
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Sodiomyces alkalinus F11 (strain: F11, type-material: culture from holotype of Sodiomyces alkalinus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Sodiomyces
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    Genomic context

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    See SODALDRAFT_362931 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    11

    NW_021167088.1Genomic Context describing neighboring genes Neighboring gene glutamyl-tRNA amidotransferase Neighboring gene hypothetical protein Neighboring gene EB1-like domain-containing protein Neighboring gene DEAD-domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_021167088.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has shifted to a protein diet. Grum-Grzhimaylo AA, et al. Mol Ecol, 2018 Dec. PMID 30368956
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_021167088.1 Reference assembly

      Range
      1350473..1353287 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028614511.1 → XP_028463874.1  hypothetical protein SODALDRAFT_362931 [Sodiomyces alkalinus F11]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3N2PNG8
      Conserved Domains (2) summary
      cd06897
      Location:87 → 196
      PX_SNARE; The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi
      cd15858
      Location:411 → 456
      SNARE_VAM7; SNARE motif of VAM7
    Protein Accession Links
    GenPept Link UniProtKB Link
    ROT36068.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases