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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1448119416

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr11:118533083 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>A
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.000004 (1/264690, TOPMED)
A=0.000007 (1/140220, GnomAD)
A=0.00000 (0/14050, ALFA)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
TMEM25 : Missense Variant
TTC36-AS1 : 2KB Upstream Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 14050 T=1.00000 A=0.00000 1.0 0.0 0.0 N/A
European Sub 9690 T=1.0000 A=0.0000 1.0 0.0 0.0 N/A
African Sub 2898 T=1.0000 A=0.0000 1.0 0.0 0.0 N/A
African Others Sub 114 T=1.000 A=0.000 1.0 0.0 0.0 N/A
African American Sub 2784 T=1.0000 A=0.0000 1.0 0.0 0.0 N/A
Asian Sub 112 T=1.000 A=0.000 1.0 0.0 0.0 N/A
East Asian Sub 86 T=1.00 A=0.00 1.0 0.0 0.0 N/A
Other Asian Sub 26 T=1.00 A=0.00 1.0 0.0 0.0 N/A
Latin American 1 Sub 146 T=1.000 A=0.000 1.0 0.0 0.0 N/A
Latin American 2 Sub 610 T=1.000 A=0.000 1.0 0.0 0.0 N/A
South Asian Sub 98 T=1.00 A=0.00 1.0 0.0 0.0 N/A
Other Sub 496 T=1.000 A=0.000 1.0 0.0 0.0 N/A


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 T=0.999996 A=0.000004
gnomAD - Genomes Global Study-wide 140220 T=0.999993 A=0.000007
gnomAD - Genomes European Sub 75928 T=1.00000 A=0.00000
gnomAD - Genomes African Sub 42024 T=0.99998 A=0.00002
gnomAD - Genomes American Sub 13662 T=1.00000 A=0.00000
gnomAD - Genomes Ashkenazi Jewish Sub 3324 T=1.0000 A=0.0000
gnomAD - Genomes East Asian Sub 3130 T=1.0000 A=0.0000
gnomAD - Genomes Other Sub 2152 T=1.0000 A=0.0000
Allele Frequency Aggregator Total Global 14050 T=1.00000 A=0.00000
Allele Frequency Aggregator European Sub 9690 T=1.0000 A=0.0000
Allele Frequency Aggregator African Sub 2898 T=1.0000 A=0.0000
Allele Frequency Aggregator Latin American 2 Sub 610 T=1.000 A=0.000
Allele Frequency Aggregator Other Sub 496 T=1.000 A=0.000
Allele Frequency Aggregator Latin American 1 Sub 146 T=1.000 A=0.000
Allele Frequency Aggregator Asian Sub 112 T=1.000 A=0.000
Allele Frequency Aggregator South Asian Sub 98 T=1.00 A=0.00
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 11 NC_000011.10:g.118533083T>A
GRCh37.p13 chr 11 NC_000011.9:g.118403798T>A
GRCh37.p13 chr 11 fix patch HG122_PATCH NW_003871072.2:g.158521T>A
Gene: TMEM25, transmembrane protein 25 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
TMEM25 transcript variant 8 NM_001318757.2:c.383-337T…

NM_001318757.2:c.383-337T>A

N/A Intron Variant
TMEM25 transcript variant 1 NM_032780.4:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform 1 precursor NP_116169.2:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant 7 NM_001318755.2:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform 6 precursor NP_001305684.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant 3 NM_001144036.2:c.237T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform 3 precursor NP_001137508.1:p.Asp79Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant 2 NM_001144034.2:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform 2 precursor NP_001137506.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant 5 NM_001144038.2:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform 5 precursor NP_001137510.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant 4 NM_001144037.2:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform 4 precursor NP_001137509.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant 6 NM_001144035.2:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform 2 precursor NP_001137507.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant 9 NR_134852.2:n.210T>A N/A Non Coding Transcript Variant
TMEM25 transcript variant X1 XM_006718926.3:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X1 XP_006718989.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X2 XM_005271703.2:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X1 XP_005271760.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X13 XM_011543038.3:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X7 XP_011541340.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X20 XM_047427720.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X1 XP_047283676.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X3 XM_017018422.3:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X2 XP_016873911.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X21 XM_047427721.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X2 XP_047283677.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X4 XM_047427722.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X3 XP_047283678.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X5 XM_047427723.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X3 XP_047283679.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X6 XM_047427724.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X3 XP_047283680.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X7 XM_047427725.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X4 XP_047283681.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X8 XM_047427726.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X4 XP_047283682.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X9 XM_047427727.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X5 XP_047283683.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X22 XM_047427728.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X12 XP_047283684.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X23 XM_047427729.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X12 XP_047283685.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X24 XM_047427730.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X12 XP_047283686.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X10 XM_047427731.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X6 XP_047283687.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X11 XM_047427732.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X6 XP_047283688.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X12 XM_047427733.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X6 XP_047283689.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X25 XM_047427734.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X13 XP_047283690.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X26 XM_047427735.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X13 XP_047283691.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X27 XM_047427736.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X13 XP_047283692.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X28 XM_047427737.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X14 XP_047283693.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X29 XM_047427738.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X14 XP_047283694.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X14 XM_024448724.2:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X8 XP_024304492.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X15 XM_017018430.3:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X9 XP_016873919.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X30 XM_047427739.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X15 XP_047283695.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X16 XM_047427740.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X10 XP_047283696.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X17 XM_047427741.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X10 XP_047283697.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X18 XM_047427742.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X10 XP_047283698.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X19 XM_047427743.1:c.549T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X11 XP_047283699.1:p.Asp183Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X31 XM_047427744.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X16 XP_047283700.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X32 XM_017018432.3:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X16 XP_016873921.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X33 XM_017018433.3:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X16 XP_016873922.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X34 XM_047427745.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X17 XP_047283701.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
TMEM25 transcript variant X35 XM_047427746.1:c.453T>A D [GAT] > E [GAA] Coding Sequence Variant
transmembrane protein 25 isoform X18 XP_047283702.1:p.Asp151Glu D (Asp) > E (Glu) Missense Variant
Gene: TTC36-AS1, TTC36 and KMT2A antisense RNA 1 (minus strand) : 2KB Upstream Variant
Molecule type Change Amino acid[Codon] SO Term
TTC36-AS1 transcript variant 5 NR_120576.1:n. N/A Upstream Transcript Variant
TTC36-AS1 transcript variant 1 NR_120572.1:n. N/A N/A
TTC36-AS1 transcript variant 2 NR_120573.1:n. N/A N/A
TTC36-AS1 transcript variant 3 NR_120574.1:n. N/A N/A
TTC36-AS1 transcript variant 4 NR_120575.1:n. N/A N/A
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= A
GRCh38.p14 chr 11 NC_000011.10:g.118533083= NC_000011.10:g.118533083T>A
GRCh37.p13 chr 11 NC_000011.9:g.118403798= NC_000011.9:g.118403798T>A
GRCh37.p13 chr 11 fix patch HG122_PATCH NW_003871072.2:g.158521= NW_003871072.2:g.158521T>A
TMEM25 transcript variant 1 NM_032780.4:c.549= NM_032780.4:c.549T>A
TMEM25 transcript variant 1 NM_032780.3:c.549= NM_032780.3:c.549T>A
TMEM25 transcript variant X3 XM_017018422.3:c.549= XM_017018422.3:c.549T>A
TMEM25 transcript variant X3 XM_017018422.2:c.549= XM_017018422.2:c.549T>A
TMEM25 transcript variant X3 XM_017018422.1:c.549= XM_017018422.1:c.549T>A
TMEM25 transcript variant X15 XM_017018430.3:c.549= XM_017018430.3:c.549T>A
TMEM25 transcript variant X6 XM_017018430.2:c.549= XM_017018430.2:c.549T>A
TMEM25 transcript variant X14 XM_017018430.1:c.549= XM_017018430.1:c.549T>A
TMEM25 transcript variant X32 XM_017018432.3:c.453= XM_017018432.3:c.453T>A
TMEM25 transcript variant X7 XM_017018432.2:c.453= XM_017018432.2:c.453T>A
TMEM25 transcript variant X16 XM_017018432.1:c.453= XM_017018432.1:c.453T>A
TMEM25 transcript variant X33 XM_017018433.3:c.453= XM_017018433.3:c.453T>A
TMEM25 transcript variant X8 XM_017018433.2:c.453= XM_017018433.2:c.453T>A
TMEM25 transcript variant X17 XM_017018433.1:c.453= XM_017018433.1:c.453T>A
TMEM25 transcript variant X1 XM_006718926.3:c.549= XM_006718926.3:c.549T>A
TMEM25 transcript variant X1 XM_006718926.2:c.549= XM_006718926.2:c.549T>A
TMEM25 transcript variant X1 XM_006718926.1:c.549= XM_006718926.1:c.549T>A
TMEM25 transcript variant X13 XM_011543038.3:c.549= XM_011543038.3:c.549T>A
TMEM25 transcript variant X10 XM_011543038.2:c.549= XM_011543038.2:c.549T>A
TMEM25 transcript variant X6 XM_011543038.1:c.549= XM_011543038.1:c.549T>A
TMEM25 transcript variant X14 XM_024448724.2:c.549= XM_024448724.2:c.549T>A
TMEM25 transcript variant X5 XM_024448724.1:c.549= XM_024448724.1:c.549T>A
TMEM25 transcript variant 2 NM_001144034.2:c.549= NM_001144034.2:c.549T>A
TMEM25 transcript variant 2 NM_001144034.1:c.549= NM_001144034.1:c.549T>A
TMEM25 transcript variant 6 NM_001144035.2:c.549= NM_001144035.2:c.549T>A
TMEM25 transcript variant 6 NM_001144035.1:c.549= NM_001144035.1:c.549T>A
TMEM25 transcript variant 4 NM_001144037.2:c.549= NM_001144037.2:c.549T>A
TMEM25 transcript variant 4 NM_001144037.1:c.549= NM_001144037.1:c.549T>A
TMEM25 transcript variant 5 NM_001144038.2:c.549= NM_001144038.2:c.549T>A
TMEM25 transcript variant 5 NM_001144038.1:c.549= NM_001144038.1:c.549T>A
TMEM25 transcript variant 3 NM_001144036.2:c.237= NM_001144036.2:c.237T>A
TMEM25 transcript variant 3 NM_001144036.1:c.237= NM_001144036.1:c.237T>A
TMEM25 transcript variant 9 NR_134852.2:n.210= NR_134852.2:n.210T>A
TMEM25 transcript variant 9 NR_134852.1:n.314= NR_134852.1:n.314T>A
TMEM25 transcript variant X2 XM_005271703.2:c.549= XM_005271703.2:c.549T>A
TMEM25 transcript variant X2 XM_005271703.1:c.549= XM_005271703.1:c.549T>A
TMEM25 transcript variant 7 NM_001318755.2:c.549= NM_001318755.2:c.549T>A
TMEM25 transcript variant 7 NM_001318755.1:c.549= NM_001318755.1:c.549T>A
TMEM25 transcript variant X21 XM_047427721.1:c.549= XM_047427721.1:c.549T>A
TMEM25 transcript variant X5 XM_047427723.1:c.549= XM_047427723.1:c.549T>A
TMEM25 transcript variant X26 XM_047427735.1:c.453= XM_047427735.1:c.453T>A
TMEM25 transcript variant X7 XM_047427725.1:c.549= XM_047427725.1:c.549T>A
TMEM25 transcript variant X31 XM_047427744.1:c.453= XM_047427744.1:c.453T>A
TMEM25 transcript variant X17 XM_047427741.1:c.549= XM_047427741.1:c.549T>A
TMEM25 transcript variant X19 XM_047427743.1:c.549= XM_047427743.1:c.549T>A
TMEM25 transcript variant X4 XM_047427722.1:c.549= XM_047427722.1:c.549T>A
TMEM25 transcript variant X6 XM_047427724.1:c.549= XM_047427724.1:c.549T>A
TMEM25 transcript variant X25 XM_047427734.1:c.453= XM_047427734.1:c.453T>A
TMEM25 transcript variant X29 XM_047427738.1:c.453= XM_047427738.1:c.453T>A
TMEM25 transcript variant X27 XM_047427736.1:c.453= XM_047427736.1:c.453T>A
TMEM25 transcript variant X28 XM_047427737.1:c.453= XM_047427737.1:c.453T>A
TMEM25 transcript variant X9 XM_047427727.1:c.549= XM_047427727.1:c.549T>A
TMEM25 transcript variant X8 XM_047427726.1:c.549= XM_047427726.1:c.549T>A
TMEM25 transcript variant X34 XM_047427745.1:c.453= XM_047427745.1:c.453T>A
TMEM25 transcript variant X30 XM_047427739.1:c.453= XM_047427739.1:c.453T>A
TMEM25 transcript variant X16 XM_047427740.1:c.549= XM_047427740.1:c.549T>A
TMEM25 transcript variant X18 XM_047427742.1:c.549= XM_047427742.1:c.549T>A
TMEM25 transcript variant X35 XM_047427746.1:c.453= XM_047427746.1:c.453T>A
TMEM25 transcript variant X20 XM_047427720.1:c.549= XM_047427720.1:c.549T>A
TMEM25 transcript variant X24 XM_047427730.1:c.453= XM_047427730.1:c.453T>A
TMEM25 transcript variant X12 XM_047427733.1:c.549= XM_047427733.1:c.549T>A
TMEM25 transcript variant X22 XM_047427728.1:c.453= XM_047427728.1:c.453T>A
TMEM25 transcript variant X23 XM_047427729.1:c.453= XM_047427729.1:c.453T>A
TMEM25 transcript variant X10 XM_047427731.1:c.549= XM_047427731.1:c.549T>A
TMEM25 transcript variant X11 XM_047427732.1:c.549= XM_047427732.1:c.549T>A
transmembrane protein 25 isoform 1 precursor NP_116169.2:p.Asp183= NP_116169.2:p.Asp183Glu
transmembrane protein 25 isoform X2 XP_016873911.1:p.Asp183= XP_016873911.1:p.Asp183Glu
transmembrane protein 25 isoform X9 XP_016873919.1:p.Asp183= XP_016873919.1:p.Asp183Glu
transmembrane protein 25 isoform X16 XP_016873921.1:p.Asp151= XP_016873921.1:p.Asp151Glu
transmembrane protein 25 isoform X16 XP_016873922.1:p.Asp151= XP_016873922.1:p.Asp151Glu
transmembrane protein 25 isoform X1 XP_006718989.1:p.Asp183= XP_006718989.1:p.Asp183Glu
transmembrane protein 25 isoform X7 XP_011541340.1:p.Asp183= XP_011541340.1:p.Asp183Glu
transmembrane protein 25 isoform X8 XP_024304492.1:p.Asp183= XP_024304492.1:p.Asp183Glu
transmembrane protein 25 isoform 2 precursor NP_001137506.1:p.Asp183= NP_001137506.1:p.Asp183Glu
transmembrane protein 25 isoform 2 precursor NP_001137507.1:p.Asp183= NP_001137507.1:p.Asp183Glu
transmembrane protein 25 isoform 4 precursor NP_001137509.1:p.Asp183= NP_001137509.1:p.Asp183Glu
transmembrane protein 25 isoform 5 precursor NP_001137510.1:p.Asp183= NP_001137510.1:p.Asp183Glu
transmembrane protein 25 isoform 3 precursor NP_001137508.1:p.Asp79= NP_001137508.1:p.Asp79Glu
transmembrane protein 25 isoform X1 XP_005271760.1:p.Asp183= XP_005271760.1:p.Asp183Glu
transmembrane protein 25 isoform 6 precursor NP_001305684.1:p.Asp183= NP_001305684.1:p.Asp183Glu
transmembrane protein 25 isoform X2 XP_047283677.1:p.Asp183= XP_047283677.1:p.Asp183Glu
transmembrane protein 25 isoform X3 XP_047283679.1:p.Asp183= XP_047283679.1:p.Asp183Glu
transmembrane protein 25 isoform X13 XP_047283691.1:p.Asp151= XP_047283691.1:p.Asp151Glu
transmembrane protein 25 isoform X4 XP_047283681.1:p.Asp183= XP_047283681.1:p.Asp183Glu
transmembrane protein 25 isoform X16 XP_047283700.1:p.Asp151= XP_047283700.1:p.Asp151Glu
transmembrane protein 25 isoform X10 XP_047283697.1:p.Asp183= XP_047283697.1:p.Asp183Glu
transmembrane protein 25 isoform X11 XP_047283699.1:p.Asp183= XP_047283699.1:p.Asp183Glu
transmembrane protein 25 isoform X3 XP_047283678.1:p.Asp183= XP_047283678.1:p.Asp183Glu
transmembrane protein 25 isoform X3 XP_047283680.1:p.Asp183= XP_047283680.1:p.Asp183Glu
transmembrane protein 25 isoform X13 XP_047283690.1:p.Asp151= XP_047283690.1:p.Asp151Glu
transmembrane protein 25 isoform X14 XP_047283694.1:p.Asp151= XP_047283694.1:p.Asp151Glu
transmembrane protein 25 isoform X13 XP_047283692.1:p.Asp151= XP_047283692.1:p.Asp151Glu
transmembrane protein 25 isoform X14 XP_047283693.1:p.Asp151= XP_047283693.1:p.Asp151Glu
transmembrane protein 25 isoform X5 XP_047283683.1:p.Asp183= XP_047283683.1:p.Asp183Glu
transmembrane protein 25 isoform X4 XP_047283682.1:p.Asp183= XP_047283682.1:p.Asp183Glu
transmembrane protein 25 isoform X17 XP_047283701.1:p.Asp151= XP_047283701.1:p.Asp151Glu
transmembrane protein 25 isoform X15 XP_047283695.1:p.Asp151= XP_047283695.1:p.Asp151Glu
transmembrane protein 25 isoform X10 XP_047283696.1:p.Asp183= XP_047283696.1:p.Asp183Glu
transmembrane protein 25 isoform X10 XP_047283698.1:p.Asp183= XP_047283698.1:p.Asp183Glu
transmembrane protein 25 isoform X18 XP_047283702.1:p.Asp151= XP_047283702.1:p.Asp151Glu
transmembrane protein 25 isoform X1 XP_047283676.1:p.Asp183= XP_047283676.1:p.Asp183Glu
transmembrane protein 25 isoform X12 XP_047283686.1:p.Asp151= XP_047283686.1:p.Asp151Glu
transmembrane protein 25 isoform X6 XP_047283689.1:p.Asp183= XP_047283689.1:p.Asp183Glu
transmembrane protein 25 isoform X12 XP_047283684.1:p.Asp151= XP_047283684.1:p.Asp151Glu
transmembrane protein 25 isoform X12 XP_047283685.1:p.Asp151= XP_047283685.1:p.Asp151Glu
transmembrane protein 25 isoform X6 XP_047283687.1:p.Asp183= XP_047283687.1:p.Asp183Glu
transmembrane protein 25 isoform X6 XP_047283688.1:p.Asp183= XP_047283688.1:p.Asp183Glu
TMEM25 transcript variant 8 NM_001318757.2:c.383-337= NM_001318757.2:c.383-337T>A
TMEM25 transcript variant X5 XM_005271707.1:c.383-337= XM_005271707.1:c.383-337T>A
TMEM25 transcript variant X5 XM_005277701.1:c.383-337= XM_005277701.1:c.383-337T>A
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Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

2 SubSNP, 3 Frequency submissions
No Submitter Submission ID Date (Build)
1 GNOMAD ss4243471814 Apr 26, 2021 (155)
2 TOPMED ss4901768066 Apr 26, 2021 (155)
3 gnomAD - Genomes NC_000011.10 - 118533083 Apr 26, 2021 (155)
4 TopMed NC_000011.10 - 118533083 Apr 26, 2021 (155)
5 ALFA NC_000011.10 - 118533083 Apr 26, 2021 (155)
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History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
393453057, 117313722, 10549713734, ss4243471814, ss4901768066 NC_000011.10:118533082:T:A NC_000011.10:118533082:T:A (self)
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Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1448119416

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The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d