Name: rs1029410954
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1029410954

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:46691723-46691740 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₅ / del(T)₄ / delTTT / delTT…
del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅ / dup(T)₉ / dup(T)₁₀
Variation Type: Indel Insertion and Deletion
Frequency: dupT=0.01112 (163/14660, ALFA)
(T)₁₈=0.05 (2/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ALS2CL : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	14660	TTTTTTTTTTTTTTTTTT=0.98745	TTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTT=0.01112, TTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTTTT=0.00041, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00102	0.978802	0.001094	0.020104	30
European	Sub	11118	TTTTTTTTTTTTTTTTTT=0.98345	TTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTT=0.01466, TTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTTTT=0.00054, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00135	0.972027	0.001444	0.02653	21
African	Sub	2240	TTTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	88	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	2152	TTTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	106	TTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
East Asian	Sub	84	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	22	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	126	TTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	548	TTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	92	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	430	TTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	14660	(T)₁₈=0.98745	del(T)₅=0.00000, delTTT=0.00000, delTT=0.00000, delT=0.00000, dupT=0.01112, dupTT=0.00000, dupTTT=0.00000, dup(T)₄=0.00000, dup(T)₅=0.00041, dup(T)₉=0.00102
Allele Frequency Aggregator	European	Sub	11118	(T)₁₈=0.98345	del(T)₅=0.00000, delTTT=0.00000, delTT=0.00000, delT=0.00000, dupT=0.01466, dupTT=0.00000, dupTTT=0.00000, dup(T)₄=0.00000, dup(T)₅=0.00054, dup(T)₉=0.00135
Allele Frequency Aggregator	African	Sub	2240	(T)₁₈=1.0000	del(T)₅=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000, dup(T)₄=0.0000, dup(T)₅=0.0000, dup(T)₉=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	548	(T)₁₈=1.000	del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000, dup(T)₉=0.000
Allele Frequency Aggregator	Other	Sub	430	(T)₁₈=1.000	del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000, dup(T)₉=0.000
Allele Frequency Aggregator	Latin American 1	Sub	126	(T)₁₈=1.000	del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000, dup(T)₉=0.000
Allele Frequency Aggregator	Asian	Sub	106	(T)₁₈=1.000	del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000, dup(T)₉=0.000
Allele Frequency Aggregator	South Asian	Sub	92	(T)₁₈=1.00	del(T)₅=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00, dup(T)₉=0.00
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dup(T)₁₀=0.95

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.46691736_46691740del
GRCh38.p14 chr 3	NC_000003.12:g.46691737_46691740del
GRCh38.p14 chr 3	NC_000003.12:g.46691738_46691740del
GRCh38.p14 chr 3	NC_000003.12:g.46691739_46691740del
GRCh38.p14 chr 3	NC_000003.12:g.46691740del
GRCh38.p14 chr 3	NC_000003.12:g.46691740dup
GRCh38.p14 chr 3	NC_000003.12:g.46691739_46691740dup
GRCh38.p14 chr 3	NC_000003.12:g.46691738_46691740dup
GRCh38.p14 chr 3	NC_000003.12:g.46691737_46691740dup
GRCh38.p14 chr 3	NC_000003.12:g.46691736_46691740dup
GRCh38.p14 chr 3	NC_000003.12:g.46691732_46691740dup
GRCh38.p14 chr 3	NC_000003.12:g.46691731_46691740dup
GRCh37.p13 chr 3	NC_000003.11:g.46733226_46733230del
GRCh37.p13 chr 3	NC_000003.11:g.46733227_46733230del
GRCh37.p13 chr 3	NC_000003.11:g.46733228_46733230del
GRCh37.p13 chr 3	NC_000003.11:g.46733229_46733230del
GRCh37.p13 chr 3	NC_000003.11:g.46733230del
GRCh37.p13 chr 3	NC_000003.11:g.46733230dup
GRCh37.p13 chr 3	NC_000003.11:g.46733229_46733230dup
GRCh37.p13 chr 3	NC_000003.11:g.46733228_46733230dup
GRCh37.p13 chr 3	NC_000003.11:g.46733227_46733230dup
GRCh37.p13 chr 3	NC_000003.11:g.46733226_46733230dup
GRCh37.p13 chr 3	NC_000003.11:g.46733222_46733230dup
GRCh37.p13 chr 3	NC_000003.11:g.46733221_46733230dup

Gene: ALS2CL, ALS2 C-terminal like (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ALS2CL transcript variant 2	NM_001190707.2:c.-26+1762… NM_001190707.2:c.-26+1762_-26+1766del	N/A	Intron Variant
ALS2CL transcript variant 1	NM_147129.5:c.-26+1916_-2… NM_147129.5:c.-26+1916_-26+1920del	N/A	Intron Variant
ALS2CL transcript variant 4	NR_033815.3:n.	N/A	Intron Variant
ALS2CL transcript variant 5	NR_135622.2:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₈=	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅	dup(T)₉	dup(T)₁₀
GRCh38.p14 chr 3	NC_000003.12:g.46691723_46691740=	NC_000003.12:g.46691736_46691740del	NC_000003.12:g.46691737_46691740del	NC_000003.12:g.46691738_46691740del	NC_000003.12:g.46691739_46691740del	NC_000003.12:g.46691740del	NC_000003.12:g.46691740dup	NC_000003.12:g.46691739_46691740dup	NC_000003.12:g.46691738_46691740dup	NC_000003.12:g.46691737_46691740dup	NC_000003.12:g.46691736_46691740dup	NC_000003.12:g.46691732_46691740dup	NC_000003.12:g.46691731_46691740dup
GRCh37.p13 chr 3	NC_000003.11:g.46733213_46733230=	NC_000003.11:g.46733226_46733230del	NC_000003.11:g.46733227_46733230del	NC_000003.11:g.46733228_46733230del	NC_000003.11:g.46733229_46733230del	NC_000003.11:g.46733230del	NC_000003.11:g.46733230dup	NC_000003.11:g.46733229_46733230dup	NC_000003.11:g.46733228_46733230dup	NC_000003.11:g.46733227_46733230dup	NC_000003.11:g.46733226_46733230dup	NC_000003.11:g.46733222_46733230dup	NC_000003.11:g.46733221_46733230dup
ALS2CL transcript variant 2	NM_001190707.1:c.-26+1766=	NM_001190707.1:c.-26+1762_-26+1766del	NM_001190707.1:c.-26+1763_-26+1766del	NM_001190707.1:c.-26+1764_-26+1766del	NM_001190707.1:c.-26+1765_-26+1766del	NM_001190707.1:c.-26+1766del	NM_001190707.1:c.-26+1766dup	NM_001190707.1:c.-26+1765_-26+1766dup	NM_001190707.1:c.-26+1764_-26+1766dup	NM_001190707.1:c.-26+1763_-26+1766dup	NM_001190707.1:c.-26+1762_-26+1766dup	NM_001190707.1:c.-26+1758_-26+1766dup	NM_001190707.1:c.-26+1757_-26+1766dup
ALS2CL transcript variant 2	NM_001190707.2:c.-26+1766=	NM_001190707.2:c.-26+1762_-26+1766del	NM_001190707.2:c.-26+1763_-26+1766del	NM_001190707.2:c.-26+1764_-26+1766del	NM_001190707.2:c.-26+1765_-26+1766del	NM_001190707.2:c.-26+1766del	NM_001190707.2:c.-26+1766dup	NM_001190707.2:c.-26+1765_-26+1766dup	NM_001190707.2:c.-26+1764_-26+1766dup	NM_001190707.2:c.-26+1763_-26+1766dup	NM_001190707.2:c.-26+1762_-26+1766dup	NM_001190707.2:c.-26+1758_-26+1766dup	NM_001190707.2:c.-26+1757_-26+1766dup
ALS2CL transcript variant 1	NM_147129.3:c.-26+1920=	NM_147129.3:c.-26+1916_-26+1920del	NM_147129.3:c.-26+1917_-26+1920del	NM_147129.3:c.-26+1918_-26+1920del	NM_147129.3:c.-26+1919_-26+1920del	NM_147129.3:c.-26+1920del	NM_147129.3:c.-26+1920dup	NM_147129.3:c.-26+1919_-26+1920dup	NM_147129.3:c.-26+1918_-26+1920dup	NM_147129.3:c.-26+1917_-26+1920dup	NM_147129.3:c.-26+1916_-26+1920dup	NM_147129.3:c.-26+1912_-26+1920dup	NM_147129.3:c.-26+1911_-26+1920dup
ALS2CL transcript variant 1	NM_147129.5:c.-26+1920=	NM_147129.5:c.-26+1916_-26+1920del	NM_147129.5:c.-26+1917_-26+1920del	NM_147129.5:c.-26+1918_-26+1920del	NM_147129.5:c.-26+1919_-26+1920del	NM_147129.5:c.-26+1920del	NM_147129.5:c.-26+1920dup	NM_147129.5:c.-26+1919_-26+1920dup	NM_147129.5:c.-26+1918_-26+1920dup	NM_147129.5:c.-26+1917_-26+1920dup	NM_147129.5:c.-26+1916_-26+1920dup	NM_147129.5:c.-26+1912_-26+1920dup	NM_147129.5:c.-26+1911_-26+1920dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

24 SubSNP, 16 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	EVA_GENOME_DK	ss1583572403	Oct 12, 2018 (152)
2	SWEGEN	ss2992244432	Nov 08, 2017 (151)
3	PACBIO	ss3784302742	Jul 13, 2019 (153)
4	EVA	ss3827791853	Apr 25, 2020 (154)
5	GNOMAD	ss4070271421	Apr 26, 2021 (155)
6	GNOMAD	ss4070271422	Apr 26, 2021 (155)
7	GNOMAD	ss4070271423	Apr 26, 2021 (155)
8	GNOMAD	ss4070271424	Apr 26, 2021 (155)
9	GNOMAD	ss4070271425	Apr 26, 2021 (155)
10	GNOMAD	ss4070271426	Apr 26, 2021 (155)
11	GNOMAD	ss4070271427	Apr 26, 2021 (155)
12	TOMMO_GENOMICS	ss5158947003	Apr 26, 2021 (155)
13	TOMMO_GENOMICS	ss5158947004	Apr 26, 2021 (155)
14	TOMMO_GENOMICS	ss5158947005	Apr 26, 2021 (155)
15	1000G_HIGH_COVERAGE	ss5253939263	Oct 12, 2022 (156)
16	1000G_HIGH_COVERAGE	ss5253939264	Oct 12, 2022 (156)
17	1000G_HIGH_COVERAGE	ss5253939265	Oct 12, 2022 (156)
18	HUGCELL_USP	ss5453345645	Oct 12, 2022 (156)
19	HUGCELL_USP	ss5453345646	Oct 12, 2022 (156)
20	HUGCELL_USP	ss5453345647	Oct 12, 2022 (156)
21	HUGCELL_USP	ss5453345648	Oct 12, 2022 (156)
22	TOMMO_GENOMICS	ss5690538672	Oct 12, 2022 (156)
23	TOMMO_GENOMICS	ss5690538673	Oct 12, 2022 (156)
24	TOMMO_GENOMICS	ss5690538674	Oct 12, 2022 (156)
25	The Danish reference pan genome	NC_000003.11 - 46733213	Apr 25, 2020 (154)
26	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106464500 (NC_000003.12:46691722::T 7401/123708) Row 106464501 (NC_000003.12:46691722::TT 1565/123690) Row 106464502 (NC_000003.12:46691722::TTT 4/123696)...	-	Apr 26, 2021 (155)
27	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106464500 (NC_000003.12:46691722::T 7401/123708) Row 106464501 (NC_000003.12:46691722::TT 1565/123690) Row 106464502 (NC_000003.12:46691722::TTT 4/123696)...	-	Apr 26, 2021 (155)
28	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106464500 (NC_000003.12:46691722::T 7401/123708) Row 106464501 (NC_000003.12:46691722::TT 1565/123690) Row 106464502 (NC_000003.12:46691722::TTT 4/123696)...	-	Apr 26, 2021 (155)
29	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106464500 (NC_000003.12:46691722::T 7401/123708) Row 106464501 (NC_000003.12:46691722::TT 1565/123690) Row 106464502 (NC_000003.12:46691722::TTT 4/123696)...	-	Apr 26, 2021 (155)
30	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106464500 (NC_000003.12:46691722::T 7401/123708) Row 106464501 (NC_000003.12:46691722::TT 1565/123690) Row 106464502 (NC_000003.12:46691722::TTT 4/123696)...	-	Apr 26, 2021 (155)
31	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106464500 (NC_000003.12:46691722::T 7401/123708) Row 106464501 (NC_000003.12:46691722::TT 1565/123690) Row 106464502 (NC_000003.12:46691722::TTT 4/123696)...	-	Apr 26, 2021 (155)
32	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106464500 (NC_000003.12:46691722::T 7401/123708) Row 106464501 (NC_000003.12:46691722::TT 1565/123690) Row 106464502 (NC_000003.12:46691722::TTT 4/123696)...	-	Apr 26, 2021 (155)
33	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106464500 (NC_000003.12:46691722::T 7401/123708) Row 106464501 (NC_000003.12:46691722::TT 1565/123690) Row 106464502 (NC_000003.12:46691722::TTT 4/123696)...	-	Apr 26, 2021 (155)
34	8.3KJPN Submission ignored due to conflicting rows: Row 16916310 (NC_000003.11:46733212:T: 44/16758) Row 16916311 (NC_000003.11:46733212::T 23/16758) Row 16916312 (NC_000003.11:46733212::TT 1/16758)	-	Apr 26, 2021 (155)
35	8.3KJPN Submission ignored due to conflicting rows: Row 16916310 (NC_000003.11:46733212:T: 44/16758) Row 16916311 (NC_000003.11:46733212::T 23/16758) Row 16916312 (NC_000003.11:46733212::TT 1/16758)	-	Apr 26, 2021 (155)
36	8.3KJPN Submission ignored due to conflicting rows: Row 16916310 (NC_000003.11:46733212:T: 44/16758) Row 16916311 (NC_000003.11:46733212::T 23/16758) Row 16916312 (NC_000003.11:46733212::TT 1/16758)	-	Apr 26, 2021 (155)
37	14KJPN Submission ignored due to conflicting rows: Row 24375776 (NC_000003.12:46691722:T: 50/28012) Row 24375777 (NC_000003.12:46691722::T 38/28012) Row 24375778 (NC_000003.12:46691722::TT 4/28012)	-	Oct 12, 2022 (156)
38	14KJPN Submission ignored due to conflicting rows: Row 24375776 (NC_000003.12:46691722:T: 50/28012) Row 24375777 (NC_000003.12:46691722::T 38/28012) Row 24375778 (NC_000003.12:46691722::TT 4/28012)	-	Oct 12, 2022 (156)
39	14KJPN Submission ignored due to conflicting rows: Row 24375776 (NC_000003.12:46691722:T: 50/28012) Row 24375777 (NC_000003.12:46691722::T 38/28012) Row 24375778 (NC_000003.12:46691722::TT 4/28012)	-	Oct 12, 2022 (156)
40	ALFA	NC_000003.12 - 46691723	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4070271427	NC_000003.12:46691722:TTTT:	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4070271426	NC_000003.12:46691722:TTT:	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4070271425, ss5453345647	NC_000003.12:46691722:TT:	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss2992244432, ss3784302742, ss3827791853, ss5158947003	NC_000003.11:46733212:T:	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss5253939265, ss5453345645, ss5690538672	NC_000003.12:46691722:T:	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss5158947004	NC_000003.11:46733212::T	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4070271421, ss5253939264, ss5453345646, ss5690538673	NC_000003.12:46691722::T	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss5158947005	NC_000003.11:46733212::TT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss4070271422, ss5253939263, ss5453345648, ss5690538674	NC_000003.12:46691722::TT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss4070271423	NC_000003.12:46691722::TTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4070271424	NC_000003.12:46691722::TTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
8611807190	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)
70591	NC_000003.11:46733212::TTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss1583572403	NC_000003.11:46733213::TTTTTTTTTT	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss2418284015	NC_000003.11:46733212:TTT:	NC_000003.12:46691722:TTTTTTTTTTTT… NC_000003.12:46691722:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1029410954

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1029410954