Name: rs10594903
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10594903

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr19:52500878-52500896 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₆ / del(T)₅ / del(T)₄ / delT…
del(T)₆ / del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT / dup(T)₈
Variation Type: Indel Insertion and Deletion
Frequency: del(T)₆=0.000 (0/250, ALFA)
del(T)₅=0.000 (0/250, ALFA)
del(T)₄=0.000 (0/250, ALFA) (+ 4 more)
delTTT=0.000 (0/250, ALFA)
delTT=0.000 (0/250, ALFA)
delT=0.000 (0/250, ALFA)
dupT=0.000 (0/250, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ZNF578 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	250	TTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
European	Sub	160	TTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African	Sub	62	TTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African Others	Sub	0	TTTTTTTTTTTTTTTTTTT=0	TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
African American	Sub	62	TTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Asian	Sub	0	TTTTTTTTTTTTTTTTTTT=0	TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
East Asian	Sub	0	TTTTTTTTTTTTTTTTTTT=0	TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
Other Asian	Sub	0	TTTTTTTTTTTTTTTTTTT=0	TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
Latin American 1	Sub	6	TTTTTTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	8	TTTTTTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
South Asian	Sub	0	TTTTTTTTTTTTTTTTTTT=0	TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
Other	Sub	14	TTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	250	(T)₁₉=1.000	del(T)₆=0.000, del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000
Allele Frequency Aggregator	European	Sub	160	(T)₁₉=1.000	del(T)₆=0.000, del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000
Allele Frequency Aggregator	African	Sub	62	(T)₁₉=1.00	del(T)₆=0.00, del(T)₅=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00
Allele Frequency Aggregator	Other	Sub	14	(T)₁₉=1.00	del(T)₆=0.00, del(T)₅=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00
Allele Frequency Aggregator	Latin American 2	Sub	8	(T)₁₉=1.0	del(T)₆=0.0, del(T)₅=0.0, del(T)₄=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0
Allele Frequency Aggregator	Latin American 1	Sub	6	(T)₁₉=1.0	del(T)₆=0.0, del(T)₅=0.0, del(T)₄=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0
Allele Frequency Aggregator	South Asian	Sub	0	(T)₁₉=0	del(T)₆=0, del(T)₅=0, del(T)₄=0, delTTT=0, delTT=0, delT=0, dupT=0
Allele Frequency Aggregator	Asian	Sub	0	(T)₁₉=0	del(T)₆=0, del(T)₅=0, del(T)₄=0, delTTT=0, delTT=0, delT=0, dupT=0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 19	NC_000019.10:g.52500891_52500896del
GRCh38.p14 chr 19	NC_000019.10:g.52500892_52500896del
GRCh38.p14 chr 19	NC_000019.10:g.52500893_52500896del
GRCh38.p14 chr 19	NC_000019.10:g.52500894_52500896del
GRCh38.p14 chr 19	NC_000019.10:g.52500895_52500896del
GRCh38.p14 chr 19	NC_000019.10:g.52500896del
GRCh38.p14 chr 19	NC_000019.10:g.52500896dup
GRCh38.p14 chr 19	NC_000019.10:g.52500889_52500896dup
GRCh37.p13 chr 19	NC_000019.9:g.53004144_53004149del
GRCh37.p13 chr 19	NC_000019.9:g.53004145_53004149del
GRCh37.p13 chr 19	NC_000019.9:g.53004146_53004149del
GRCh37.p13 chr 19	NC_000019.9:g.53004147_53004149del
GRCh37.p13 chr 19	NC_000019.9:g.53004148_53004149del
GRCh37.p13 chr 19	NC_000019.9:g.53004149del
GRCh37.p13 chr 19	NC_000019.9:g.53004149dup
GRCh37.p13 chr 19	NC_000019.9:g.53004142_53004149dup

Gene: ZNF578, zinc finger protein 578 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ZNF578 transcript variant 1	NM_001099694.2:c.-19-936_… NM_001099694.2:c.-19-936_-19-931del	N/A	Intron Variant
ZNF578 transcript variant 2	NM_001366182.2:c.-19-936_… NM_001366182.2:c.-19-936_-19-931del	N/A	Intron Variant
ZNF578 transcript variant X1	XM_047438189.1:c.-19-936_… XM_047438189.1:c.-19-936_-19-931del	N/A	Intron Variant
ZNF578 transcript variant X2	XM_047438190.1:c.-19-936_… XM_047438190.1:c.-19-936_-19-931del	N/A	Intron Variant
ZNF578 transcript variant X3	XM_047438191.1:c.-19-936_… XM_047438191.1:c.-19-936_-19-931del	N/A	Intron Variant
ZNF578 transcript variant X4	XM_047438192.1:c.-19-936_… XM_047438192.1:c.-19-936_-19-931del	N/A	Intron Variant
ZNF578 transcript variant X5	XM_047438193.1:c.-19-936_… XM_047438193.1:c.-19-936_-19-931del	N/A	Intron Variant
ZNF578 transcript variant X6	XM_047438194.1:c.-99-936_… XM_047438194.1:c.-99-936_-99-931del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₉=	del(T)₆	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT	dup(T)₈
GRCh38.p14 chr 19	NC_000019.10:g.52500878_52500896=	NC_000019.10:g.52500891_52500896del	NC_000019.10:g.52500892_52500896del	NC_000019.10:g.52500893_52500896del	NC_000019.10:g.52500894_52500896del	NC_000019.10:g.52500895_52500896del	NC_000019.10:g.52500896del	NC_000019.10:g.52500896dup	NC_000019.10:g.52500889_52500896dup
GRCh37.p13 chr 19	NC_000019.9:g.53004131_53004149=	NC_000019.9:g.53004144_53004149del	NC_000019.9:g.53004145_53004149del	NC_000019.9:g.53004146_53004149del	NC_000019.9:g.53004147_53004149del	NC_000019.9:g.53004148_53004149del	NC_000019.9:g.53004149del	NC_000019.9:g.53004149dup	NC_000019.9:g.53004142_53004149dup
ZNF578 transcript variant 1	NM_001099694.1:c.-19-949=	NM_001099694.1:c.-19-936_-19-931del	NM_001099694.1:c.-19-935_-19-931del	NM_001099694.1:c.-19-934_-19-931del	NM_001099694.1:c.-19-933_-19-931del	NM_001099694.1:c.-19-932_-19-931del	NM_001099694.1:c.-19-931del	NM_001099694.1:c.-19-931dup	NM_001099694.1:c.-19-938_-19-931dup
ZNF578 transcript variant 1	NM_001099694.2:c.-19-949=	NM_001099694.2:c.-19-936_-19-931del	NM_001099694.2:c.-19-935_-19-931del	NM_001099694.2:c.-19-934_-19-931del	NM_001099694.2:c.-19-933_-19-931del	NM_001099694.2:c.-19-932_-19-931del	NM_001099694.2:c.-19-931del	NM_001099694.2:c.-19-931dup	NM_001099694.2:c.-19-938_-19-931dup
ZNF578 transcript variant 2	NM_001366182.2:c.-19-949=	NM_001366182.2:c.-19-936_-19-931del	NM_001366182.2:c.-19-935_-19-931del	NM_001366182.2:c.-19-934_-19-931del	NM_001366182.2:c.-19-933_-19-931del	NM_001366182.2:c.-19-932_-19-931del	NM_001366182.2:c.-19-931del	NM_001366182.2:c.-19-931dup	NM_001366182.2:c.-19-938_-19-931dup
ZNF578 transcript variant X1	XM_005258527.1:c.-19-949=	XM_005258527.1:c.-19-936_-19-931del	XM_005258527.1:c.-19-935_-19-931del	XM_005258527.1:c.-19-934_-19-931del	XM_005258527.1:c.-19-933_-19-931del	XM_005258527.1:c.-19-932_-19-931del	XM_005258527.1:c.-19-931del	XM_005258527.1:c.-19-931dup	XM_005258527.1:c.-19-938_-19-931dup
ZNF578 transcript variant X1	XM_047438189.1:c.-19-949=	XM_047438189.1:c.-19-936_-19-931del	XM_047438189.1:c.-19-935_-19-931del	XM_047438189.1:c.-19-934_-19-931del	XM_047438189.1:c.-19-933_-19-931del	XM_047438189.1:c.-19-932_-19-931del	XM_047438189.1:c.-19-931del	XM_047438189.1:c.-19-931dup	XM_047438189.1:c.-19-938_-19-931dup
ZNF578 transcript variant X2	XM_047438190.1:c.-19-949=	XM_047438190.1:c.-19-936_-19-931del	XM_047438190.1:c.-19-935_-19-931del	XM_047438190.1:c.-19-934_-19-931del	XM_047438190.1:c.-19-933_-19-931del	XM_047438190.1:c.-19-932_-19-931del	XM_047438190.1:c.-19-931del	XM_047438190.1:c.-19-931dup	XM_047438190.1:c.-19-938_-19-931dup
ZNF578 transcript variant X3	XM_047438191.1:c.-19-949=	XM_047438191.1:c.-19-936_-19-931del	XM_047438191.1:c.-19-935_-19-931del	XM_047438191.1:c.-19-934_-19-931del	XM_047438191.1:c.-19-933_-19-931del	XM_047438191.1:c.-19-932_-19-931del	XM_047438191.1:c.-19-931del	XM_047438191.1:c.-19-931dup	XM_047438191.1:c.-19-938_-19-931dup
ZNF578 transcript variant X4	XM_047438192.1:c.-19-949=	XM_047438192.1:c.-19-936_-19-931del	XM_047438192.1:c.-19-935_-19-931del	XM_047438192.1:c.-19-934_-19-931del	XM_047438192.1:c.-19-933_-19-931del	XM_047438192.1:c.-19-932_-19-931del	XM_047438192.1:c.-19-931del	XM_047438192.1:c.-19-931dup	XM_047438192.1:c.-19-938_-19-931dup
ZNF578 transcript variant X5	XM_047438193.1:c.-19-949=	XM_047438193.1:c.-19-936_-19-931del	XM_047438193.1:c.-19-935_-19-931del	XM_047438193.1:c.-19-934_-19-931del	XM_047438193.1:c.-19-933_-19-931del	XM_047438193.1:c.-19-932_-19-931del	XM_047438193.1:c.-19-931del	XM_047438193.1:c.-19-931dup	XM_047438193.1:c.-19-938_-19-931dup
ZNF578 transcript variant X6	XM_047438194.1:c.-99-949=	XM_047438194.1:c.-99-936_-99-931del	XM_047438194.1:c.-99-935_-99-931del	XM_047438194.1:c.-99-934_-99-931del	XM_047438194.1:c.-99-933_-99-931del	XM_047438194.1:c.-99-932_-99-931del	XM_047438194.1:c.-99-931del	XM_047438194.1:c.-99-931dup	XM_047438194.1:c.-99-938_-99-931dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

50 SubSNP, 19 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss40979262	Mar 15, 2016 (147)
2	HGSV	ss80725547	Sep 08, 2015 (146)
3	HGSV	ss81879511	Sep 08, 2015 (146)
4	HGSV	ss82009807	Sep 08, 2015 (146)
5	HUMANGENOME_JCVI	ss96282682	Mar 15, 2016 (149)
6	GMI	ss289393837	May 04, 2012 (137)
7	PJP	ss294966940	May 09, 2011 (142)
8	PJP	ss294966941	May 09, 2011 (137)
9	EVA_UK10K_ALSPAC	ss1709243598	Apr 01, 2015 (144)
10	EVA_UK10K_TWINSUK	ss1709243720	Apr 01, 2015 (144)
11	EVA_UK10K_TWINSUK	ss1710798159	Apr 01, 2015 (144)
12	EVA_UK10K_ALSPAC	ss1710798160	Apr 01, 2015 (144)
13	HAMMER_LAB	ss1809355066	Sep 08, 2015 (146)
14	MCHAISSO	ss3064769341	Nov 08, 2017 (151)
15	EVA_DECODE	ss3702968995	Jul 13, 2019 (153)
16	EVA_DECODE	ss3702968996	Jul 13, 2019 (153)
17	EVA_DECODE	ss3702968997	Jul 13, 2019 (153)
18	EVA_DECODE	ss3702968998	Jul 13, 2019 (153)
19	EVA_DECODE	ss3702968999	Jul 13, 2019 (153)
20	EVA_DECODE	ss3702969000	Jul 13, 2019 (153)
21	PACBIO	ss3788560111	Jul 13, 2019 (153)
22	PACBIO	ss3793465454	Jul 13, 2019 (153)
23	PACBIO	ss3798352405	Jul 13, 2019 (153)
24	EVA	ss3835514396	Apr 27, 2020 (154)
25	GNOMAD	ss4332948695	Apr 27, 2021 (155)
26	GNOMAD	ss4332948697	Apr 27, 2021 (155)
27	GNOMAD	ss4332948698	Apr 27, 2021 (155)
28	GNOMAD	ss4332948699	Apr 27, 2021 (155)
29	GNOMAD	ss4332948700	Apr 27, 2021 (155)
30	GNOMAD	ss4332948701	Apr 27, 2021 (155)
31	TOMMO_GENOMICS	ss5228244224	Apr 27, 2021 (155)
32	TOMMO_GENOMICS	ss5228244225	Apr 27, 2021 (155)
33	TOMMO_GENOMICS	ss5228244226	Apr 27, 2021 (155)
34	TOMMO_GENOMICS	ss5228244227	Apr 27, 2021 (155)
35	1000G_HIGH_COVERAGE	ss5307618441	Oct 13, 2022 (156)
36	1000G_HIGH_COVERAGE	ss5307618442	Oct 13, 2022 (156)
37	1000G_HIGH_COVERAGE	ss5307618443	Oct 13, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5307618444	Oct 13, 2022 (156)
39	1000G_HIGH_COVERAGE	ss5307618445	Oct 13, 2022 (156)
40	HUGCELL_USP	ss5500081157	Oct 13, 2022 (156)
41	HUGCELL_USP	ss5500081158	Oct 13, 2022 (156)
42	HUGCELL_USP	ss5500081159	Oct 13, 2022 (156)
43	HUGCELL_USP	ss5500081160	Oct 13, 2022 (156)
44	TOMMO_GENOMICS	ss5787041696	Oct 13, 2022 (156)
45	TOMMO_GENOMICS	ss5787041697	Oct 13, 2022 (156)
46	TOMMO_GENOMICS	ss5787041698	Oct 13, 2022 (156)
47	TOMMO_GENOMICS	ss5787041700	Oct 13, 2022 (156)
48	EVA	ss5840691492	Oct 13, 2022 (156)
49	EVA	ss5840691493	Oct 13, 2022 (156)
50	EVA	ss5981064284	Oct 13, 2022 (156)
51	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 42618509 (NC_000019.9:53004131:T: 2388/3854) Row 42618510 (NC_000019.9:53004130:TTT: 1460/3854)	-	Oct 12, 2018 (152)
52	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 42618509 (NC_000019.9:53004131:T: 2388/3854) Row 42618510 (NC_000019.9:53004130:TTT: 1460/3854)	-	Oct 12, 2018 (152)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542898976 (NC_000019.10:52500877::T 10/107804) Row 542898978 (NC_000019.10:52500877:T: 36136/107340) Row 542898979 (NC_000019.10:52500877:TT: 34146/107616)...	-	Apr 27, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542898976 (NC_000019.10:52500877::T 10/107804) Row 542898978 (NC_000019.10:52500877:T: 36136/107340) Row 542898979 (NC_000019.10:52500877:TT: 34146/107616)...	-	Apr 27, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542898976 (NC_000019.10:52500877::T 10/107804) Row 542898978 (NC_000019.10:52500877:T: 36136/107340) Row 542898979 (NC_000019.10:52500877:TT: 34146/107616)...	-	Apr 27, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542898976 (NC_000019.10:52500877::T 10/107804) Row 542898978 (NC_000019.10:52500877:T: 36136/107340) Row 542898979 (NC_000019.10:52500877:TT: 34146/107616)...	-	Apr 27, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542898976 (NC_000019.10:52500877::T 10/107804) Row 542898978 (NC_000019.10:52500877:T: 36136/107340) Row 542898979 (NC_000019.10:52500877:TT: 34146/107616)...	-	Apr 27, 2021 (155)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542898976 (NC_000019.10:52500877::T 10/107804) Row 542898978 (NC_000019.10:52500877:T: 36136/107340) Row 542898979 (NC_000019.10:52500877:TT: 34146/107616)...	-	Apr 27, 2021 (155)
59	8.3KJPN Submission ignored due to conflicting rows: Row 86213531 (NC_000019.9:53004130:TTT: 205/15976) Row 86213532 (NC_000019.9:53004130:TT: 7295/15976) Row 86213533 (NC_000019.9:53004130:T: 5749/15976)...	-	Apr 27, 2021 (155)
60	8.3KJPN Submission ignored due to conflicting rows: Row 86213531 (NC_000019.9:53004130:TTT: 205/15976) Row 86213532 (NC_000019.9:53004130:TT: 7295/15976) Row 86213533 (NC_000019.9:53004130:T: 5749/15976)...	-	Apr 27, 2021 (155)
61	8.3KJPN Submission ignored due to conflicting rows: Row 86213531 (NC_000019.9:53004130:TTT: 205/15976) Row 86213532 (NC_000019.9:53004130:TT: 7295/15976) Row 86213533 (NC_000019.9:53004130:T: 5749/15976)...	-	Apr 27, 2021 (155)
62	8.3KJPN Submission ignored due to conflicting rows: Row 86213531 (NC_000019.9:53004130:TTT: 205/15976) Row 86213532 (NC_000019.9:53004130:TT: 7295/15976) Row 86213533 (NC_000019.9:53004130:T: 5749/15976)...	-	Apr 27, 2021 (155)
63	14KJPN Submission ignored due to conflicting rows: Row 120878800 (NC_000019.10:52500877:T: 10362/28052) Row 120878801 (NC_000019.10:52500877:TT: 13288/28052) Row 120878802 (NC_000019.10:52500877:TTTT: 681/28052)...	-	Oct 13, 2022 (156)
64	14KJPN Submission ignored due to conflicting rows: Row 120878800 (NC_000019.10:52500877:T: 10362/28052) Row 120878801 (NC_000019.10:52500877:TT: 13288/28052) Row 120878802 (NC_000019.10:52500877:TTTT: 681/28052)...	-	Oct 13, 2022 (156)
65	14KJPN Submission ignored due to conflicting rows: Row 120878800 (NC_000019.10:52500877:T: 10362/28052) Row 120878801 (NC_000019.10:52500877:TT: 13288/28052) Row 120878802 (NC_000019.10:52500877:TTTT: 681/28052)...	-	Oct 13, 2022 (156)
66	14KJPN Submission ignored due to conflicting rows: Row 120878800 (NC_000019.10:52500877:T: 10362/28052) Row 120878801 (NC_000019.10:52500877:TT: 13288/28052) Row 120878802 (NC_000019.10:52500877:TTTT: 681/28052)...	-	Oct 13, 2022 (156)
67	UK 10K study - Twins Submission ignored due to conflicting rows: Row 42618509 (NC_000019.9:53004131:T: 2299/3708) Row 42618510 (NC_000019.9:53004130:TTT: 1404/3708)	-	Oct 12, 2018 (152)
68	UK 10K study - Twins Submission ignored due to conflicting rows: Row 42618509 (NC_000019.9:53004131:T: 2299/3708) Row 42618510 (NC_000019.9:53004130:TTT: 1404/3708)	-	Oct 12, 2018 (152)
69	ALFA	NC_000019.10 - 52500878	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs200114662	May 11, 2012 (137)
rs33951603	May 23, 2006 (127)
rs57576919	May 23, 2008 (130)
rs139472385	Aug 21, 2014 (142)
rs796926775	Sep 11, 2015 (146)
rs58906502	May 11, 2012 (137)
rs397788978	Aug 21, 2014 (142)
rs796635202	Sep 11, 2015 (146)
rs869084085	Sep 14, 2016 (149)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
6954943596	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss1809355066	NC_000019.9:53004130:TTTTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4332948701, ss5307618443, ss5500081160	NC_000019.10:52500877:TTTTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
6954943596	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss5228244227	NC_000019.9:53004130:TTTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3702968995, ss4332948700, ss5307618445, ss5787041698	NC_000019.10:52500877:TTTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
6954943596	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss289393837	NC_000019.8:57695942:TTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss1709243598, ss1709243720, ss5228244224, ss5840691493, ss5981064284	NC_000019.9:53004130:TTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4332948699, ss5307618444, ss5500081159, ss5787041700	NC_000019.10:52500877:TTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
6954943596	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3702968996	NC_000019.10:52500878:TTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss82009807, ss294966940	NC_000019.8:57695959:TT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3788560111, ss3835514396, ss5228244225, ss5840691492	NC_000019.9:53004130:TT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss1710798159, ss1710798160	NC_000019.9:53004131:TT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3064769341, ss4332948698, ss5307618442, ss5500081157, ss5787041697	NC_000019.10:52500877:TT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
6954943596	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3702968997	NC_000019.10:52500879:TT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss40979262	NT_011109.16:25272348:TT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss80725547, ss81879511, ss294966941	NC_000019.8:57695960:T:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3793465454, ss3798352405, ss5228244226	NC_000019.9:53004130:T:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
	NC_000019.9:53004131:T:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4332948697, ss5307618441, ss5500081158, ss5787041696	NC_000019.10:52500877:T:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
6954943596	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3702968998	NC_000019.10:52500880:T:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss40979262	NT_011109.16:25272348:TT:T	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss96282682	NT_011109.16:25272366:T:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4332948695	NC_000019.10:52500877::T	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
6954943596	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss3702968999	NC_000019.10:52500881::T	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss3702969000	NC_000019.10:52500881::TTTTTTTT	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3295869856	NC_000019.10:52500877:TTTTTT:	NC_000019.10:52500877:TTTTTTTTTTTT… NC_000019.10:52500877:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs10594903

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10594903