Name: rs10710539
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10710539

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr6:22693877-22693888 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(C)₄ / delCCC / delCC / delC / …
del(C)₄ / delCCC / delCC / delC / dupC / dupCC / dupCCC
Variation Type: Indel Insertion and Deletion
Frequency: dupC=0.2378 (1192/5012, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC03005 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	5012	CCCCCCCCCCCC=0.4326	CCCCCCCC=0.0000, CCCCCCCCC=0.0676, CCCCCCCCCC=0.1351, CCCCCCCCCCC=0.1223, CCCCCCCCCCCCC=0.2378, CCCCCCCCCCCCCC=0.0046, CCCCCCCCCCCCCCC=0.0000	0.530508	0.209322	0.260169	32
European	Sub	4742	CCCCCCCCCCCC=0.4013	CCCCCCCC=0.0000, CCCCCCCCC=0.0715, CCCCCCCCCC=0.1423, CCCCCCCCCCC=0.1286, CCCCCCCCCCCCC=0.2514, CCCCCCCCCCCCCC=0.0049, CCCCCCCCCCCCCCC=0.0000	0.471374	0.235687	0.292939	32
African	Sub	168	CCCCCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCC=0.000, CCCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCCC=0.000	1.0	0.0	0.0	N/A
African Others	Sub	14	CCCCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
African American	Sub	154	CCCCCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCC=0.000, CCCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCCC=0.000	1.0	0.0	0.0	N/A
Asian	Sub	12	CCCCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	10	CCCCCCCCCCCC=1.0	CCCCCCCC=0.0, CCCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Other Asian	Sub	2	CCCCCCCCCCCC=1.0	CCCCCCCC=0.0, CCCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	8	CCCCCCCCCCCC=1.0	CCCCCCCC=0.0, CCCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	26	CCCCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	10	CCCCCCCCCCCC=1.0	CCCCCCCC=0.0, CCCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Other	Sub	46	CCCCCCCCCCCC=0.89	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.04, CCCCCCCCCCC=0.07, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	5012	(C)₁₂=0.4326	del(C)₄=0.0000, delCCC=0.0676, delCC=0.1351, delC=0.1223, dupC=0.2378, dupCC=0.0046, dupCCC=0.0000
Allele Frequency Aggregator	European	Sub	4742	(C)₁₂=0.4013	del(C)₄=0.0000, delCCC=0.0715, delCC=0.1423, delC=0.1286, dupC=0.2514, dupCC=0.0049, dupCCC=0.0000
Allele Frequency Aggregator	African	Sub	168	(C)₁₂=1.000	del(C)₄=0.000, delCCC=0.000, delCC=0.000, delC=0.000, dupC=0.000, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	Other	Sub	46	(C)₁₂=0.89	del(C)₄=0.00, delCCC=0.00, delCC=0.04, delC=0.07, dupC=0.00, dupCC=0.00, dupCCC=0.00
Allele Frequency Aggregator	Latin American 2	Sub	26	(C)₁₂=1.00	del(C)₄=0.00, delCCC=0.00, delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00, dupCCC=0.00
Allele Frequency Aggregator	Asian	Sub	12	(C)₁₂=1.00	del(C)₄=0.00, delCCC=0.00, delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00, dupCCC=0.00
Allele Frequency Aggregator	South Asian	Sub	10	(C)₁₂=1.0	del(C)₄=0.0, delCCC=0.0, delCC=0.0, delC=0.0, dupC=0.0, dupCC=0.0, dupCCC=0.0
Allele Frequency Aggregator	Latin American 1	Sub	8	(C)₁₂=1.0	del(C)₄=0.0, delCCC=0.0, delCC=0.0, delC=0.0, dupC=0.0, dupCC=0.0, dupCCC=0.0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 6	NC_000006.12:g.22693885_22693888del
GRCh38.p14 chr 6	NC_000006.12:g.22693886_22693888del
GRCh38.p14 chr 6	NC_000006.12:g.22693887_22693888del
GRCh38.p14 chr 6	NC_000006.12:g.22693888del
GRCh38.p14 chr 6	NC_000006.12:g.22693888dup
GRCh38.p14 chr 6	NC_000006.12:g.22693887_22693888dup
GRCh38.p14 chr 6	NC_000006.12:g.22693886_22693888dup
GRCh37.p13 chr 6	NC_000006.11:g.22694114_22694117del
GRCh37.p13 chr 6	NC_000006.11:g.22694115_22694117del
GRCh37.p13 chr 6	NC_000006.11:g.22694116_22694117del
GRCh37.p13 chr 6	NC_000006.11:g.22694117del
GRCh37.p13 chr 6	NC_000006.11:g.22694117dup
GRCh37.p13 chr 6	NC_000006.11:g.22694116_22694117dup
GRCh37.p13 chr 6	NC_000006.11:g.22694115_22694117dup

Gene: LINC03005, long intergenic non-protein coding RNA 3005 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC03005 transcript variant 1	NR_134613.1:n.	N/A	Intron Variant
LINC03005 transcript variant 2	NR_134614.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(C)₁₂=	del(C)₄	delCCC	delCC	delC	dupC	dupCC	dupCCC
GRCh38.p14 chr 6	NC_000006.12:g.22693877_22693888=	NC_000006.12:g.22693885_22693888del	NC_000006.12:g.22693886_22693888del	NC_000006.12:g.22693887_22693888del	NC_000006.12:g.22693888del	NC_000006.12:g.22693888dup	NC_000006.12:g.22693887_22693888dup	NC_000006.12:g.22693886_22693888dup
GRCh37.p13 chr 6	NC_000006.11:g.22694106_22694117=	NC_000006.11:g.22694114_22694117del	NC_000006.11:g.22694115_22694117del	NC_000006.11:g.22694116_22694117del	NC_000006.11:g.22694117del	NC_000006.11:g.22694117dup	NC_000006.11:g.22694116_22694117dup	NC_000006.11:g.22694115_22694117dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

64 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42752501	Mar 15, 2006 (138)
2	ABI	ss42855833	Oct 12, 2018 (152)
3	HUMANGENOME_JCVI	ss98451806	Feb 06, 2009 (138)
4	BUSHMAN	ss193850461	Mar 15, 2016 (147)
5	PJP	ss295269393	Oct 12, 2018 (152)
6	PJP	ss295269394	May 09, 2011 (134)
7	SSMP	ss663681033	Apr 01, 2015 (144)
8	DDI	ss1536497662	Apr 01, 2015 (144)
9	EVA_UK10K_ALSPAC	ss1705076115	Apr 01, 2015 (144)
10	EVA_UK10K_TWINSUK	ss1705076819	Apr 01, 2015 (144)
11	EVA_UK10K_TWINSUK	ss1710258155	Apr 01, 2015 (144)
12	EVA_UK10K_ALSPAC	ss1710258156	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1710258157	Apr 01, 2015 (144)
14	EVA_UK10K_ALSPAC	ss1710258158	Apr 01, 2015 (144)
15	SWEGEN	ss2998654938	Nov 08, 2017 (151)
16	MCHAISSO	ss3065072794	Nov 08, 2017 (151)
17	BIOINF_KMB_FNS_UNIBA	ss3645938029	Oct 12, 2018 (152)
18	BIOINF_KMB_FNS_UNIBA	ss3645938030	Oct 12, 2018 (152)
19	BIOINF_KMB_FNS_UNIBA	ss3645938031	Oct 12, 2018 (152)
20	EVA_DECODE	ss3716756472	Jul 13, 2019 (153)
21	EVA_DECODE	ss3716756473	Jul 13, 2019 (153)
22	EVA_DECODE	ss3716756474	Jul 13, 2019 (153)
23	EVA_DECODE	ss3716756475	Jul 13, 2019 (153)
24	EVA_DECODE	ss3716756476	Jul 13, 2019 (153)
25	EVA_DECODE	ss3716756477	Jul 13, 2019 (153)
26	EVA_DECODE	ss3716756479	Jul 13, 2019 (153)
27	PACBIO	ss3785397392	Jul 13, 2019 (153)
28	PACBIO	ss3785397393	Jul 13, 2019 (153)
29	PACBIO	ss3790759260	Jul 13, 2019 (153)
30	PACBIO	ss3790759261	Jul 13, 2019 (153)
31	PACBIO	ss3795636603	Jul 13, 2019 (153)
32	PACBIO	ss3795636604	Jul 13, 2019 (153)
33	EVA	ss3829779655	Apr 26, 2020 (154)
34	GNOMAD	ss4138329446	Apr 26, 2021 (155)
35	GNOMAD	ss4138329447	Apr 26, 2021 (155)
36	GNOMAD	ss4138329448	Apr 26, 2021 (155)
37	GNOMAD	ss4138329450	Apr 26, 2021 (155)
38	GNOMAD	ss4138329451	Apr 26, 2021 (155)
39	GNOMAD	ss4138329452	Apr 26, 2021 (155)
40	GNOMAD	ss4138329453	Apr 26, 2021 (155)
41	TOMMO_GENOMICS	ss5176537401	Apr 26, 2021 (155)
42	TOMMO_GENOMICS	ss5176537402	Apr 26, 2021 (155)
43	TOMMO_GENOMICS	ss5176537403	Apr 26, 2021 (155)
44	TOMMO_GENOMICS	ss5176537404	Apr 26, 2021 (155)
45	TOMMO_GENOMICS	ss5176537405	Apr 26, 2021 (155)
46	1000G_HIGH_COVERAGE	ss5267699716	Oct 13, 2022 (156)
47	1000G_HIGH_COVERAGE	ss5267699717	Oct 13, 2022 (156)
48	1000G_HIGH_COVERAGE	ss5267699718	Oct 13, 2022 (156)
49	1000G_HIGH_COVERAGE	ss5267699719	Oct 13, 2022 (156)
50	1000G_HIGH_COVERAGE	ss5267699720	Oct 13, 2022 (156)
51	1000G_HIGH_COVERAGE	ss5267699721	Oct 13, 2022 (156)
52	HUGCELL_USP	ss5465465996	Oct 13, 2022 (156)
53	HUGCELL_USP	ss5465465997	Oct 13, 2022 (156)
54	HUGCELL_USP	ss5465465998	Oct 13, 2022 (156)
55	HUGCELL_USP	ss5465465999	Oct 13, 2022 (156)
56	TOMMO_GENOMICS	ss5714311205	Oct 13, 2022 (156)
57	TOMMO_GENOMICS	ss5714311206	Oct 13, 2022 (156)
58	TOMMO_GENOMICS	ss5714311208	Oct 13, 2022 (156)
59	TOMMO_GENOMICS	ss5714311209	Oct 13, 2022 (156)
60	TOMMO_GENOMICS	ss5714311210	Oct 13, 2022 (156)
61	EVA	ss5841911091	Oct 13, 2022 (156)
62	EVA	ss5841911092	Oct 13, 2022 (156)
63	EVA	ss5841911093	Oct 13, 2022 (156)
64	EVA	ss5855240849	Oct 13, 2022 (156)
65	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 17304421 (NC_000006.11:22694106:C: 1620/3854) Row 17304423 (NC_000006.11:22694105:CCC: 728/3854)	-	Oct 12, 2018 (152)
66	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 17304421 (NC_000006.11:22694106:C: 1620/3854) Row 17304423 (NC_000006.11:22694105:CCC: 728/3854)	-	Oct 12, 2018 (152)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 219474029 (NC_000006.12:22693876::C 27250/122328) Row 219474030 (NC_000006.12:22693876::CC 734/123524) Row 219474031 (NC_000006.12:22693876::CCC 70/123580)...	-	Apr 26, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 219474029 (NC_000006.12:22693876::C 27250/122328) Row 219474030 (NC_000006.12:22693876::CC 734/123524) Row 219474031 (NC_000006.12:22693876::CCC 70/123580)...	-	Apr 26, 2021 (155)
69	gnomAD - Genomes Submission ignored due to conflicting rows: Row 219474029 (NC_000006.12:22693876::C 27250/122328) Row 219474030 (NC_000006.12:22693876::CC 734/123524) Row 219474031 (NC_000006.12:22693876::CCC 70/123580)...	-	Apr 26, 2021 (155)
70	gnomAD - Genomes Submission ignored due to conflicting rows: Row 219474029 (NC_000006.12:22693876::C 27250/122328) Row 219474030 (NC_000006.12:22693876::CC 734/123524) Row 219474031 (NC_000006.12:22693876::CCC 70/123580)...	-	Apr 26, 2021 (155)
71	gnomAD - Genomes Submission ignored due to conflicting rows: Row 219474029 (NC_000006.12:22693876::C 27250/122328) Row 219474030 (NC_000006.12:22693876::CC 734/123524) Row 219474031 (NC_000006.12:22693876::CCC 70/123580)...	-	Apr 26, 2021 (155)
72	gnomAD - Genomes Submission ignored due to conflicting rows: Row 219474029 (NC_000006.12:22693876::C 27250/122328) Row 219474030 (NC_000006.12:22693876::CC 734/123524) Row 219474031 (NC_000006.12:22693876::CCC 70/123580)...	-	Apr 26, 2021 (155)
73	gnomAD - Genomes Submission ignored due to conflicting rows: Row 219474029 (NC_000006.12:22693876::C 27250/122328) Row 219474030 (NC_000006.12:22693876::CC 734/123524) Row 219474031 (NC_000006.12:22693876::CCC 70/123580)...	-	Apr 26, 2021 (155)
74	8.3KJPN Submission ignored due to conflicting rows: Row 34506708 (NC_000006.11:22694105::C 4550/16336) Row 34506709 (NC_000006.11:22694105:C: 2561/16336) Row 34506710 (NC_000006.11:22694105::CC 153/16336)...	-	Apr 26, 2021 (155)
75	8.3KJPN Submission ignored due to conflicting rows: Row 34506708 (NC_000006.11:22694105::C 4550/16336) Row 34506709 (NC_000006.11:22694105:C: 2561/16336) Row 34506710 (NC_000006.11:22694105::CC 153/16336)...	-	Apr 26, 2021 (155)
76	8.3KJPN Submission ignored due to conflicting rows: Row 34506708 (NC_000006.11:22694105::C 4550/16336) Row 34506709 (NC_000006.11:22694105:C: 2561/16336) Row 34506710 (NC_000006.11:22694105::CC 153/16336)...	-	Apr 26, 2021 (155)
77	8.3KJPN Submission ignored due to conflicting rows: Row 34506708 (NC_000006.11:22694105::C 4550/16336) Row 34506709 (NC_000006.11:22694105:C: 2561/16336) Row 34506710 (NC_000006.11:22694105::CC 153/16336)...	-	Apr 26, 2021 (155)
78	8.3KJPN Submission ignored due to conflicting rows: Row 34506708 (NC_000006.11:22694105::C 4550/16336) Row 34506709 (NC_000006.11:22694105:C: 2561/16336) Row 34506710 (NC_000006.11:22694105::CC 153/16336)...	-	Apr 26, 2021 (155)
79	14KJPN Submission ignored due to conflicting rows: Row 48148309 (NC_000006.12:22693876:C: 4313/28134) Row 48148310 (NC_000006.12:22693876::C 8864/28134) Row 48148312 (NC_000006.12:22693876:CC: 108/28134)...	-	Oct 13, 2022 (156)
80	14KJPN Submission ignored due to conflicting rows: Row 48148309 (NC_000006.12:22693876:C: 4313/28134) Row 48148310 (NC_000006.12:22693876::C 8864/28134) Row 48148312 (NC_000006.12:22693876:CC: 108/28134)...	-	Oct 13, 2022 (156)
81	14KJPN Submission ignored due to conflicting rows: Row 48148309 (NC_000006.12:22693876:C: 4313/28134) Row 48148310 (NC_000006.12:22693876::C 8864/28134) Row 48148312 (NC_000006.12:22693876:CC: 108/28134)...	-	Oct 13, 2022 (156)
82	14KJPN Submission ignored due to conflicting rows: Row 48148309 (NC_000006.12:22693876:C: 4313/28134) Row 48148310 (NC_000006.12:22693876::C 8864/28134) Row 48148312 (NC_000006.12:22693876:CC: 108/28134)...	-	Oct 13, 2022 (156)
83	14KJPN Submission ignored due to conflicting rows: Row 48148309 (NC_000006.12:22693876:C: 4313/28134) Row 48148310 (NC_000006.12:22693876::C 8864/28134) Row 48148312 (NC_000006.12:22693876:CC: 108/28134)...	-	Oct 13, 2022 (156)
84	UK 10K study - Twins Submission ignored due to conflicting rows: Row 17304421 (NC_000006.11:22694106:C: 1586/3708) Row 17304423 (NC_000006.11:22694105:CCC: 675/3708)	-	Oct 12, 2018 (152)
85	UK 10K study - Twins Submission ignored due to conflicting rows: Row 17304421 (NC_000006.11:22694106:CC: 1586/3708) Row 17304422 (NC_000006.11:22694107:C: 775/3708) Row 17304423 (NC_000006.11:22694105:CCC: 675/3708)	-	Apr 26, 2020 (154)
86	UK 10K study - Twins Submission ignored due to conflicting rows: Row 17304421 (NC_000006.11:22694106:C: 1586/3708) Row 17304423 (NC_000006.11:22694105:CCC: 675/3708)	-	Oct 12, 2018 (152)
87	ALFA	NC_000006.12 - 22693877	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs36071573	Apr 25, 2013 (138)
rs111241357	Oct 13, 2011 (136)
rs372083449	May 13, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4138329453, ss5267699721	NC_000006.12:22693876:CCCC:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCC	(self)
1268083127	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCC	(self)
ss193850461	NT_007592.15:22634105:CCCC:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCC	(self)
ss1536497662, ss1705076115, ss1705076819, ss2998654938, ss3785397392, ss3790759260, ss3795636603, ss5841911091	NC_000006.11:22694105:CCC:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss3065072794, ss3645938031, ss3716756477, ss4138329452, ss5267699718, ss5465465999	NC_000006.12:22693876:CCC:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCC	(self)
1268083127	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss5176537404, ss5841911092	NC_000006.11:22694105:CC:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCC	(self)
ss1710258155, ss1710258156	NC_000006.11:22694106:CC:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCC	(self)
ss3645938030, ss4138329451, ss5267699717, ss5465465996, ss5714311208	NC_000006.12:22693876:CC:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCC	(self)
1268083127	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCC	(self)
ss3716756476	NC_000006.12:22693877:CC:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCC	(self)
ss295269394	NC_000006.10:22802095:C:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss663681033, ss3829779655, ss5176537402, ss5841911093	NC_000006.11:22694105:C:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
	NC_000006.11:22694106:C:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss1710258157, ss1710258158	NC_000006.11:22694107:C:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss3645938029, ss4138329450, ss5267699716, ss5465465997, ss5714311205, ss5855240849	NC_000006.12:22693876:C:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
1268083127	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss3716756475	NC_000006.12:22693878:C:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss42752501, ss98451806	NT_007592.15:22634105:C:	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss295269393	NC_000006.10:22802090::C	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss3785397393, ss3790759261, ss3795636604, ss5176537401	NC_000006.11:22694105::C	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss4138329446, ss5267699719, ss5465465998, ss5714311206	NC_000006.12:22693876::C	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
1268083127	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss3716756474	NC_000006.12:22693879::C	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss3716756479	NC_000006.12:22693885::C	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss42855833	NT_007592.15:22634105::C	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss5176537403	NC_000006.11:22694105::CC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCC	(self)
ss4138329447, ss5267699720, ss5714311209	NC_000006.12:22693876::CC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCC	(self)
1268083127	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCC	(self)
ss3716756473	NC_000006.12:22693879::CC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCC	(self)
ss5176537405	NC_000006.11:22694105::CCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCCC	(self)
ss4138329448, ss5714311210	NC_000006.12:22693876::CCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCCC	(self)
1268083127	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCCC	(self)
ss3716756472	NC_000006.12:22693879::CCC	NC_000006.12:22693876:CCCCCCCCCCCC… NC_000006.12:22693876:CCCCCCCCCCCC:CCCCCCCCCCCCCCC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs10710539

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10710539