Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs111818272

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr9:89484989-89485011 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
del(GT)7 / del(GT)4 / del(GT)3 / d…

del(GT)7 / del(GT)4 / del(GT)3 / delGTGT / delGT / dupGT / dupGTGT / dup(GT)3 / dup(GT)4 / dup(GT)5

Variation Type
Indel Insertion and Deletion
Frequency
dupGT=0.2095 (1525/7280, ALFA)
delGTGT=0.1343 (544/4050, 1000G)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
SEMA4D : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 7280 TGTGTGTGTGTGTGTGTGTGTGT=0.6328 TGTGTGTGT=0.0000, TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGT=0.1243, TGTGTGTGTGTGTGTGTGTGTGTGT=0.2095, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0334, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 0.666036 0.094282 0.239682 32
European Sub 5456 TGTGTGTGTGTGTGTGTGTGTGT=0.5104 TGTGTGTGT=0.0000, TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGT=0.1657, TGTGTGTGTGTGTGTGTGTGTGTGT=0.2793, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0445, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 0.490751 0.143931 0.365318 27
African Sub 1260 TGTGTGTGTGTGTGTGTGTGTGT=1.0000 TGTGTGTGT=0.0000, TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 1.0 0.0 0.0 N/A
African Others Sub 62 TGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
African American Sub 1198 TGTGTGTGTGTGTGTGTGTGTGT=1.0000 TGTGTGTGT=0.0000, TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000 1.0 0.0 0.0 N/A
Asian Sub 94 TGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
East Asian Sub 76 TGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Other Asian Sub 18 TGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Latin American 1 Sub 30 TGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Latin American 2 Sub 256 TGTGTGTGTGTGTGTGTGTGTGT=1.000 TGTGTGTGT=0.000, TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 1.0 0.0 0.0 N/A
South Asian Sub 26 TGTGTGTGTGTGTGTGTGTGTGT=1.00 TGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00 1.0 0.0 0.0 N/A
Other Sub 158 TGTGTGTGTGTGTGTGTGTGTGT=0.987 TGTGTGTGT=0.000, TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGT=0.006, TGTGTGTGTGTGTGTGTGTGTGTGT=0.006, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000 0.987179 0.0 0.012821 0


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 7280 (TG)11T=0.6328 del(GT)7=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.1243, delGT=0.0000, dupGT=0.2095, dupGTGT=0.0334, dup(GT)3=0.0000, dup(GT)4=0.0000
Allele Frequency Aggregator European Sub 5456 (TG)11T=0.5104 del(GT)7=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.1657, delGT=0.0000, dupGT=0.2793, dupGTGT=0.0445, dup(GT)3=0.0000, dup(GT)4=0.0000
Allele Frequency Aggregator African Sub 1260 (TG)11T=1.0000 del(GT)7=0.0000, del(GT)4=0.0000, del(GT)3=0.0000, delGTGT=0.0000, delGT=0.0000, dupGT=0.0000, dupGTGT=0.0000, dup(GT)3=0.0000, dup(GT)4=0.0000
Allele Frequency Aggregator Latin American 2 Sub 256 (TG)11T=1.000 del(GT)7=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000
Allele Frequency Aggregator Other Sub 158 (TG)11T=0.987 del(GT)7=0.000, del(GT)4=0.000, del(GT)3=0.000, delGTGT=0.006, delGT=0.000, dupGT=0.006, dupGTGT=0.000, dup(GT)3=0.000, dup(GT)4=0.000
Allele Frequency Aggregator Asian Sub 94 (TG)11T=1.00 del(GT)7=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00
Allele Frequency Aggregator Latin American 1 Sub 30 (TG)11T=1.00 del(GT)7=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00
Allele Frequency Aggregator South Asian Sub 26 (TG)11T=1.00 del(GT)7=0.00, del(GT)4=0.00, del(GT)3=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)3=0.00, dup(GT)4=0.00
1000Genomes Global Study-wide 4050 (TG)11T=0.8657 delGTGT=0.1343
1000Genomes African Sub 1181 (TG)11T=0.8645 delGTGT=0.1355
1000Genomes East Asian Sub 956 (TG)11T=0.999 delGTGT=0.001
1000Genomes South Asian Sub 705 (TG)11T=0.912 delGTGT=0.088
1000Genomes Europe Sub 682 (TG)11T=0.661 delGTGT=0.339
1000Genomes American Sub 526 (TG)11T=0.829 delGTGT=0.171
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[4]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[7]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[8]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[9]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[10]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[12]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[13]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[14]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[15]
GRCh38.p14 chr 9 NC_000009.12:g.89484990GT[16]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[4]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[7]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[8]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[9]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[10]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[12]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[13]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[14]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[15]
GRCh37.p13 chr 9 NC_000009.11:g.92099905GT[16]
Gene: SEMA4D, semaphorin 4D (minus strand)
Molecule type Change Amino acid[Codon] SO Term
SEMA4D transcript variant 3 NM_001371194.2:c.-310+129…

NM_001371194.2:c.-310+12909CA[4]

N/A Intron Variant
SEMA4D transcript variant 4 NM_001371195.1:c.-373+105…

NM_001371195.1:c.-373+10557CA[4]

N/A Intron Variant
SEMA4D transcript variant 7 NM_001371198.1:c.-310+105…

NM_001371198.1:c.-310+10557CA[4]

N/A Intron Variant
SEMA4D transcript variant 2 NM_001142287.2:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 5 NM_001371196.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 6 NM_001371197.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 8 NM_001371199.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 9 NM_001371200.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 10 NM_001371201.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 11 NM_001371202.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 1 NM_006378.4:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 12 NR_163884.1:n. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 13 NR_163885.1:n. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 14 NR_163886.1:n. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 15 NR_163887.1:n. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 16 NR_163888.1:n. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant 17 NR_163889.1:n. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X4 XM_011518123.3:c.-598-946…

XM_011518123.3:c.-598-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X9 XM_011518125.2:c.-448+129…

XM_011518125.2:c.-448+12909CA[4]

N/A Intron Variant
SEMA4D transcript variant X6 XM_011518127.3:c.-513-946…

XM_011518127.3:c.-513-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X14 XM_011518128.3:c.-438-946…

XM_011518128.3:c.-438-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X22 XM_011518129.2:c.-373+123…

XM_011518129.2:c.-373+12365CA[4]

N/A Intron Variant
SEMA4D transcript variant X3 XM_011518133.3:c.-375-946…

XM_011518133.3:c.-375-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X1 XM_047422606.1:c.-523-946…

XM_047422606.1:c.-523-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X2 XM_047422607.1:c.-373+129…

XM_047422607.1:c.-373+12909CA[4]

N/A Intron Variant
SEMA4D transcript variant X12 XM_047422614.1:c.-460-946…

XM_047422614.1:c.-460-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X23 XM_047422619.1:c.-310+123…

XM_047422619.1:c.-310+12365CA[4]

N/A Intron Variant
SEMA4D transcript variant X24 XM_047422620.1:c.-598-946…

XM_047422620.1:c.-598-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X28 XM_047422624.1:c.-460-946…

XM_047422624.1:c.-460-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X31 XM_047422627.1:c.-310+129…

XM_047422627.1:c.-310+12909CA[4]

N/A Intron Variant
SEMA4D transcript variant X33 XM_047422629.1:c.-598-946…

XM_047422629.1:c.-598-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X34 XM_047422630.1:c.-598-946…

XM_047422630.1:c.-598-9460CA[4]

N/A Intron Variant
SEMA4D transcript variant X37 XM_047422631.1:c.-373+129…

XM_047422631.1:c.-373+12909CA[4]

N/A Intron Variant
SEMA4D transcript variant X36 XM_047422632.1:c.-310+129…

XM_047422632.1:c.-310+12909CA[4]

N/A Intron Variant
SEMA4D transcript variant X8 XM_011518124.3:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X11 XM_011518130.3:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X16 XM_011518131.3:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X5 XM_011518134.3:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X7 XM_017014193.3:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X13 XM_017014194.2:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X21 XM_017014195.2:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X19 XM_017014198.2:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X10 XM_047422609.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X39 XM_047422610.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X17 XM_047422611.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X40 XM_047422612.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X41 XM_047422613.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X20 XM_047422615.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X15 XM_047422617.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X18 XM_047422618.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X25 XM_047422621.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X26 XM_047422622.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X27 XM_047422623.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X29 XM_047422625.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X30 XM_047422626.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X32 XM_047422628.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X35 XM_047422633.1:c. N/A Genic Upstream Transcript Variant
SEMA4D transcript variant X38 XM_047422634.1:c. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (TG)11T= del(GT)7 del(GT)4 del(GT)3 delGTGT delGT dupGT dupGTGT dup(GT)3 dup(GT)4 dup(GT)5
GRCh38.p14 chr 9 NC_000009.12:g.89484989_89485011= NC_000009.12:g.89484990GT[4] NC_000009.12:g.89484990GT[7] NC_000009.12:g.89484990GT[8] NC_000009.12:g.89484990GT[9] NC_000009.12:g.89484990GT[10] NC_000009.12:g.89484990GT[12] NC_000009.12:g.89484990GT[13] NC_000009.12:g.89484990GT[14] NC_000009.12:g.89484990GT[15] NC_000009.12:g.89484990GT[16]
GRCh37.p13 chr 9 NC_000009.11:g.92099904_92099926= NC_000009.11:g.92099905GT[4] NC_000009.11:g.92099905GT[7] NC_000009.11:g.92099905GT[8] NC_000009.11:g.92099905GT[9] NC_000009.11:g.92099905GT[10] NC_000009.11:g.92099905GT[12] NC_000009.11:g.92099905GT[13] NC_000009.11:g.92099905GT[14] NC_000009.11:g.92099905GT[15] NC_000009.11:g.92099905GT[16]
SEMA4D transcript variant 3 NM_001371194.2:c.-310+12930= NM_001371194.2:c.-310+12909CA[4] NM_001371194.2:c.-310+12909CA[7] NM_001371194.2:c.-310+12909CA[8] NM_001371194.2:c.-310+12909CA[9] NM_001371194.2:c.-310+12909CA[10] NM_001371194.2:c.-310+12909CA[12] NM_001371194.2:c.-310+12909CA[13] NM_001371194.2:c.-310+12909CA[14] NM_001371194.2:c.-310+12909CA[15] NM_001371194.2:c.-310+12909CA[16]
SEMA4D transcript variant 4 NM_001371195.1:c.-373+10578= NM_001371195.1:c.-373+10557CA[4] NM_001371195.1:c.-373+10557CA[7] NM_001371195.1:c.-373+10557CA[8] NM_001371195.1:c.-373+10557CA[9] NM_001371195.1:c.-373+10557CA[10] NM_001371195.1:c.-373+10557CA[12] NM_001371195.1:c.-373+10557CA[13] NM_001371195.1:c.-373+10557CA[14] NM_001371195.1:c.-373+10557CA[15] NM_001371195.1:c.-373+10557CA[16]
SEMA4D transcript variant 7 NM_001371198.1:c.-310+10578= NM_001371198.1:c.-310+10557CA[4] NM_001371198.1:c.-310+10557CA[7] NM_001371198.1:c.-310+10557CA[8] NM_001371198.1:c.-310+10557CA[9] NM_001371198.1:c.-310+10557CA[10] NM_001371198.1:c.-310+10557CA[12] NM_001371198.1:c.-310+10557CA[13] NM_001371198.1:c.-310+10557CA[14] NM_001371198.1:c.-310+10557CA[15] NM_001371198.1:c.-310+10557CA[16]
SEMA4D transcript variant X1 XM_005251647.1:c.-523-9439= XM_005251647.1:c.-523-9460CA[4] XM_005251647.1:c.-523-9460CA[7] XM_005251647.1:c.-523-9460CA[8] XM_005251647.1:c.-523-9460CA[9] XM_005251647.1:c.-523-9460CA[10] XM_005251647.1:c.-523-9460CA[12] XM_005251647.1:c.-523-9460CA[13] XM_005251647.1:c.-523-9460CA[14] XM_005251647.1:c.-523-9460CA[15] XM_005251647.1:c.-523-9460CA[16]
SEMA4D transcript variant X2 XM_005251648.1:c.-373+12930= XM_005251648.1:c.-373+12909CA[4] XM_005251648.1:c.-373+12909CA[7] XM_005251648.1:c.-373+12909CA[8] XM_005251648.1:c.-373+12909CA[9] XM_005251648.1:c.-373+12909CA[10] XM_005251648.1:c.-373+12909CA[12] XM_005251648.1:c.-373+12909CA[13] XM_005251648.1:c.-373+12909CA[14] XM_005251648.1:c.-373+12909CA[15] XM_005251648.1:c.-373+12909CA[16]
SEMA4D transcript variant X3 XM_005251649.1:c.-438-9439= XM_005251649.1:c.-438-9460CA[4] XM_005251649.1:c.-438-9460CA[7] XM_005251649.1:c.-438-9460CA[8] XM_005251649.1:c.-438-9460CA[9] XM_005251649.1:c.-438-9460CA[10] XM_005251649.1:c.-438-9460CA[12] XM_005251649.1:c.-438-9460CA[13] XM_005251649.1:c.-438-9460CA[14] XM_005251649.1:c.-438-9460CA[15] XM_005251649.1:c.-438-9460CA[16]
SEMA4D transcript variant X4 XM_005251650.1:c.-373+10578= XM_005251650.1:c.-373+10557CA[4] XM_005251650.1:c.-373+10557CA[7] XM_005251650.1:c.-373+10557CA[8] XM_005251650.1:c.-373+10557CA[9] XM_005251650.1:c.-373+10557CA[10] XM_005251650.1:c.-373+10557CA[12] XM_005251650.1:c.-373+10557CA[13] XM_005251650.1:c.-373+10557CA[14] XM_005251650.1:c.-373+10557CA[15] XM_005251650.1:c.-373+10557CA[16]
SEMA4D transcript variant X5 XM_005251651.1:c.-598-9439= XM_005251651.1:c.-598-9460CA[4] XM_005251651.1:c.-598-9460CA[7] XM_005251651.1:c.-598-9460CA[8] XM_005251651.1:c.-598-9460CA[9] XM_005251651.1:c.-598-9460CA[10] XM_005251651.1:c.-598-9460CA[12] XM_005251651.1:c.-598-9460CA[13] XM_005251651.1:c.-598-9460CA[14] XM_005251651.1:c.-598-9460CA[15] XM_005251651.1:c.-598-9460CA[16]
SEMA4D transcript variant X7 XM_005251653.1:c.-460-9439= XM_005251653.1:c.-460-9460CA[4] XM_005251653.1:c.-460-9460CA[7] XM_005251653.1:c.-460-9460CA[8] XM_005251653.1:c.-460-9460CA[9] XM_005251653.1:c.-460-9460CA[10] XM_005251653.1:c.-460-9460CA[12] XM_005251653.1:c.-460-9460CA[13] XM_005251653.1:c.-460-9460CA[14] XM_005251653.1:c.-460-9460CA[15] XM_005251653.1:c.-460-9460CA[16]
SEMA4D transcript variant X8 XM_005251654.1:c.-310+12930= XM_005251654.1:c.-310+12909CA[4] XM_005251654.1:c.-310+12909CA[7] XM_005251654.1:c.-310+12909CA[8] XM_005251654.1:c.-310+12909CA[9] XM_005251654.1:c.-310+12909CA[10] XM_005251654.1:c.-310+12909CA[12] XM_005251654.1:c.-310+12909CA[13] XM_005251654.1:c.-310+12909CA[14] XM_005251654.1:c.-310+12909CA[15] XM_005251654.1:c.-310+12909CA[16]
SEMA4D transcript variant X4 XM_011518123.3:c.-598-9439= XM_011518123.3:c.-598-9460CA[4] XM_011518123.3:c.-598-9460CA[7] XM_011518123.3:c.-598-9460CA[8] XM_011518123.3:c.-598-9460CA[9] XM_011518123.3:c.-598-9460CA[10] XM_011518123.3:c.-598-9460CA[12] XM_011518123.3:c.-598-9460CA[13] XM_011518123.3:c.-598-9460CA[14] XM_011518123.3:c.-598-9460CA[15] XM_011518123.3:c.-598-9460CA[16]
SEMA4D transcript variant X9 XM_011518125.2:c.-448+12930= XM_011518125.2:c.-448+12909CA[4] XM_011518125.2:c.-448+12909CA[7] XM_011518125.2:c.-448+12909CA[8] XM_011518125.2:c.-448+12909CA[9] XM_011518125.2:c.-448+12909CA[10] XM_011518125.2:c.-448+12909CA[12] XM_011518125.2:c.-448+12909CA[13] XM_011518125.2:c.-448+12909CA[14] XM_011518125.2:c.-448+12909CA[15] XM_011518125.2:c.-448+12909CA[16]
SEMA4D transcript variant X6 XM_011518127.3:c.-513-9439= XM_011518127.3:c.-513-9460CA[4] XM_011518127.3:c.-513-9460CA[7] XM_011518127.3:c.-513-9460CA[8] XM_011518127.3:c.-513-9460CA[9] XM_011518127.3:c.-513-9460CA[10] XM_011518127.3:c.-513-9460CA[12] XM_011518127.3:c.-513-9460CA[13] XM_011518127.3:c.-513-9460CA[14] XM_011518127.3:c.-513-9460CA[15] XM_011518127.3:c.-513-9460CA[16]
SEMA4D transcript variant X14 XM_011518128.3:c.-438-9439= XM_011518128.3:c.-438-9460CA[4] XM_011518128.3:c.-438-9460CA[7] XM_011518128.3:c.-438-9460CA[8] XM_011518128.3:c.-438-9460CA[9] XM_011518128.3:c.-438-9460CA[10] XM_011518128.3:c.-438-9460CA[12] XM_011518128.3:c.-438-9460CA[13] XM_011518128.3:c.-438-9460CA[14] XM_011518128.3:c.-438-9460CA[15] XM_011518128.3:c.-438-9460CA[16]
SEMA4D transcript variant X22 XM_011518129.2:c.-373+12386= XM_011518129.2:c.-373+12365CA[4] XM_011518129.2:c.-373+12365CA[7] XM_011518129.2:c.-373+12365CA[8] XM_011518129.2:c.-373+12365CA[9] XM_011518129.2:c.-373+12365CA[10] XM_011518129.2:c.-373+12365CA[12] XM_011518129.2:c.-373+12365CA[13] XM_011518129.2:c.-373+12365CA[14] XM_011518129.2:c.-373+12365CA[15] XM_011518129.2:c.-373+12365CA[16]
SEMA4D transcript variant X3 XM_011518133.3:c.-375-9439= XM_011518133.3:c.-375-9460CA[4] XM_011518133.3:c.-375-9460CA[7] XM_011518133.3:c.-375-9460CA[8] XM_011518133.3:c.-375-9460CA[9] XM_011518133.3:c.-375-9460CA[10] XM_011518133.3:c.-375-9460CA[12] XM_011518133.3:c.-375-9460CA[13] XM_011518133.3:c.-375-9460CA[14] XM_011518133.3:c.-375-9460CA[15] XM_011518133.3:c.-375-9460CA[16]
SEMA4D transcript variant X1 XM_047422606.1:c.-523-9439= XM_047422606.1:c.-523-9460CA[4] XM_047422606.1:c.-523-9460CA[7] XM_047422606.1:c.-523-9460CA[8] XM_047422606.1:c.-523-9460CA[9] XM_047422606.1:c.-523-9460CA[10] XM_047422606.1:c.-523-9460CA[12] XM_047422606.1:c.-523-9460CA[13] XM_047422606.1:c.-523-9460CA[14] XM_047422606.1:c.-523-9460CA[15] XM_047422606.1:c.-523-9460CA[16]
SEMA4D transcript variant X2 XM_047422607.1:c.-373+12930= XM_047422607.1:c.-373+12909CA[4] XM_047422607.1:c.-373+12909CA[7] XM_047422607.1:c.-373+12909CA[8] XM_047422607.1:c.-373+12909CA[9] XM_047422607.1:c.-373+12909CA[10] XM_047422607.1:c.-373+12909CA[12] XM_047422607.1:c.-373+12909CA[13] XM_047422607.1:c.-373+12909CA[14] XM_047422607.1:c.-373+12909CA[15] XM_047422607.1:c.-373+12909CA[16]
SEMA4D transcript variant X12 XM_047422614.1:c.-460-9439= XM_047422614.1:c.-460-9460CA[4] XM_047422614.1:c.-460-9460CA[7] XM_047422614.1:c.-460-9460CA[8] XM_047422614.1:c.-460-9460CA[9] XM_047422614.1:c.-460-9460CA[10] XM_047422614.1:c.-460-9460CA[12] XM_047422614.1:c.-460-9460CA[13] XM_047422614.1:c.-460-9460CA[14] XM_047422614.1:c.-460-9460CA[15] XM_047422614.1:c.-460-9460CA[16]
SEMA4D transcript variant X23 XM_047422619.1:c.-310+12386= XM_047422619.1:c.-310+12365CA[4] XM_047422619.1:c.-310+12365CA[7] XM_047422619.1:c.-310+12365CA[8] XM_047422619.1:c.-310+12365CA[9] XM_047422619.1:c.-310+12365CA[10] XM_047422619.1:c.-310+12365CA[12] XM_047422619.1:c.-310+12365CA[13] XM_047422619.1:c.-310+12365CA[14] XM_047422619.1:c.-310+12365CA[15] XM_047422619.1:c.-310+12365CA[16]
SEMA4D transcript variant X24 XM_047422620.1:c.-598-9439= XM_047422620.1:c.-598-9460CA[4] XM_047422620.1:c.-598-9460CA[7] XM_047422620.1:c.-598-9460CA[8] XM_047422620.1:c.-598-9460CA[9] XM_047422620.1:c.-598-9460CA[10] XM_047422620.1:c.-598-9460CA[12] XM_047422620.1:c.-598-9460CA[13] XM_047422620.1:c.-598-9460CA[14] XM_047422620.1:c.-598-9460CA[15] XM_047422620.1:c.-598-9460CA[16]
SEMA4D transcript variant X28 XM_047422624.1:c.-460-9439= XM_047422624.1:c.-460-9460CA[4] XM_047422624.1:c.-460-9460CA[7] XM_047422624.1:c.-460-9460CA[8] XM_047422624.1:c.-460-9460CA[9] XM_047422624.1:c.-460-9460CA[10] XM_047422624.1:c.-460-9460CA[12] XM_047422624.1:c.-460-9460CA[13] XM_047422624.1:c.-460-9460CA[14] XM_047422624.1:c.-460-9460CA[15] XM_047422624.1:c.-460-9460CA[16]
SEMA4D transcript variant X31 XM_047422627.1:c.-310+12930= XM_047422627.1:c.-310+12909CA[4] XM_047422627.1:c.-310+12909CA[7] XM_047422627.1:c.-310+12909CA[8] XM_047422627.1:c.-310+12909CA[9] XM_047422627.1:c.-310+12909CA[10] XM_047422627.1:c.-310+12909CA[12] XM_047422627.1:c.-310+12909CA[13] XM_047422627.1:c.-310+12909CA[14] XM_047422627.1:c.-310+12909CA[15] XM_047422627.1:c.-310+12909CA[16]
SEMA4D transcript variant X33 XM_047422629.1:c.-598-9439= XM_047422629.1:c.-598-9460CA[4] XM_047422629.1:c.-598-9460CA[7] XM_047422629.1:c.-598-9460CA[8] XM_047422629.1:c.-598-9460CA[9] XM_047422629.1:c.-598-9460CA[10] XM_047422629.1:c.-598-9460CA[12] XM_047422629.1:c.-598-9460CA[13] XM_047422629.1:c.-598-9460CA[14] XM_047422629.1:c.-598-9460CA[15] XM_047422629.1:c.-598-9460CA[16]
SEMA4D transcript variant X34 XM_047422630.1:c.-598-9439= XM_047422630.1:c.-598-9460CA[4] XM_047422630.1:c.-598-9460CA[7] XM_047422630.1:c.-598-9460CA[8] XM_047422630.1:c.-598-9460CA[9] XM_047422630.1:c.-598-9460CA[10] XM_047422630.1:c.-598-9460CA[12] XM_047422630.1:c.-598-9460CA[13] XM_047422630.1:c.-598-9460CA[14] XM_047422630.1:c.-598-9460CA[15] XM_047422630.1:c.-598-9460CA[16]
SEMA4D transcript variant X37 XM_047422631.1:c.-373+12930= XM_047422631.1:c.-373+12909CA[4] XM_047422631.1:c.-373+12909CA[7] XM_047422631.1:c.-373+12909CA[8] XM_047422631.1:c.-373+12909CA[9] XM_047422631.1:c.-373+12909CA[10] XM_047422631.1:c.-373+12909CA[12] XM_047422631.1:c.-373+12909CA[13] XM_047422631.1:c.-373+12909CA[14] XM_047422631.1:c.-373+12909CA[15] XM_047422631.1:c.-373+12909CA[16]
SEMA4D transcript variant X36 XM_047422632.1:c.-310+12930= XM_047422632.1:c.-310+12909CA[4] XM_047422632.1:c.-310+12909CA[7] XM_047422632.1:c.-310+12909CA[8] XM_047422632.1:c.-310+12909CA[9] XM_047422632.1:c.-310+12909CA[10] XM_047422632.1:c.-310+12909CA[12] XM_047422632.1:c.-310+12909CA[13] XM_047422632.1:c.-310+12909CA[14] XM_047422632.1:c.-310+12909CA[15] XM_047422632.1:c.-310+12909CA[16]
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

69 SubSNP, 29 Frequency submissions
No Submitter Submission ID Date (Build)
1 BUSHMAN ss194029485 Jul 04, 2010 (132)
2 BL ss256119749 May 09, 2011 (134)
3 GMI ss287847794 May 09, 2011 (134)
4 1000GENOMES ss327161701 Jan 10, 2018 (151)
5 1000GENOMES ss327234631 May 09, 2011 (135)
6 LUNTER ss551956489 Apr 25, 2013 (138)
7 LUNTER ss553382635 Jan 10, 2018 (151)
8 TISHKOFF ss554470531 Apr 25, 2013 (138)
9 SSMP ss663940892 Jan 10, 2018 (151)
10 BILGI_BIOE ss666475263 Apr 25, 2013 (138)
11 1000GENOMES ss1368430590 Aug 21, 2014 (142)
12 1000GENOMES ss1368430593 Oct 12, 2018 (152)
13 1000GENOMES ss1368430596 Oct 12, 2018 (152)
14 EVA_UK10K_ALSPAC ss1706466777 Apr 01, 2015 (144)
15 EVA_UK10K_TWINSUK ss1706466827 Apr 01, 2015 (144)
16 EVA_UK10K_TWINSUK ss1710430777 Oct 12, 2018 (152)
17 EVA_UK10K_ALSPAC ss1710430906 Oct 12, 2018 (152)
18 HAMMER_LAB ss1806051322 Sep 08, 2015 (146)
19 HAMMER_LAB ss1806051323 Sep 08, 2015 (146)
20 SWEGEN ss3005197897 Nov 08, 2017 (151)
21 MCHAISSO ss3066257861 Nov 08, 2017 (151)
22 URBANLAB ss3649189283 Oct 12, 2018 (152)
23 EVA_DECODE ss3724276174 Jul 13, 2019 (153)
24 EVA_DECODE ss3724276175 Jul 13, 2019 (153)
25 EVA_DECODE ss3724276176 Jul 13, 2019 (153)
26 EVA_DECODE ss3724276177 Jul 13, 2019 (153)
27 EVA_DECODE ss3724276178 Jul 13, 2019 (153)
28 PACBIO ss3786459702 Jul 13, 2019 (153)
29 PACBIO ss3791669627 Jul 13, 2019 (153)
30 PACBIO ss3796551042 Jul 13, 2019 (153)
31 KHV_HUMAN_GENOMES ss3812556769 Jul 13, 2019 (153)
32 KHV_HUMAN_GENOMES ss3812556770 Jul 13, 2019 (153)
33 KHV_HUMAN_GENOMES ss3812556771 Jul 13, 2019 (153)
34 EVA ss3831735034 Apr 26, 2020 (154)
35 EVA ss3839395668 Apr 26, 2020 (154)
36 EVA ss3844858915 Apr 26, 2020 (154)
37 KOGIC ss3966257644 Apr 26, 2020 (154)
38 KOGIC ss3966257645 Apr 26, 2020 (154)
39 KOGIC ss3966257646 Apr 26, 2020 (154)
40 KOGIC ss3966257647 Apr 26, 2020 (154)
41 KOGIC ss3966257648 Apr 26, 2020 (154)
42 GNOMAD ss4205266335 Apr 26, 2021 (155)
43 GNOMAD ss4205266336 Apr 26, 2021 (155)
44 GNOMAD ss4205266337 Apr 26, 2021 (155)
45 GNOMAD ss4205266338 Apr 26, 2021 (155)
46 GNOMAD ss4205266339 Apr 26, 2021 (155)
47 GNOMAD ss4205266340 Apr 26, 2021 (155)
48 GNOMAD ss4205266341 Apr 26, 2021 (155)
49 GNOMAD ss4205266342 Apr 26, 2021 (155)
50 TOMMO_GENOMICS ss5194206680 Apr 26, 2021 (155)
51 TOMMO_GENOMICS ss5194206681 Apr 26, 2021 (155)
52 TOMMO_GENOMICS ss5194206682 Apr 26, 2021 (155)
53 TOMMO_GENOMICS ss5194206683 Apr 26, 2021 (155)
54 TOMMO_GENOMICS ss5194206684 Apr 26, 2021 (155)
55 1000G_HIGH_COVERAGE ss5281336455 Oct 16, 2022 (156)
56 1000G_HIGH_COVERAGE ss5281336456 Oct 16, 2022 (156)
57 HUGCELL_USP ss5477290601 Oct 16, 2022 (156)
58 HUGCELL_USP ss5477290602 Oct 16, 2022 (156)
59 HUGCELL_USP ss5477290603 Oct 16, 2022 (156)
60 HUGCELL_USP ss5477290604 Oct 16, 2022 (156)
61 HUGCELL_USP ss5477290605 Oct 16, 2022 (156)
62 TOMMO_GENOMICS ss5738410421 Oct 16, 2022 (156)
63 TOMMO_GENOMICS ss5738410422 Oct 16, 2022 (156)
64 TOMMO_GENOMICS ss5738410423 Oct 16, 2022 (156)
65 TOMMO_GENOMICS ss5738410424 Oct 16, 2022 (156)
66 TOMMO_GENOMICS ss5738410425 Oct 16, 2022 (156)
67 EVA ss5829414981 Oct 16, 2022 (156)
68 EVA ss5829414982 Oct 16, 2022 (156)
69 EVA ss5856831428 Oct 16, 2022 (156)
70 1000Genomes NC_000009.11 - 92099904 Oct 12, 2018 (152)
71 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 25981230 (NC_000009.11:92099903::TG 1349/3854)
Row 25981231 (NC_000009.11:92099903:TGTG: 1026/3854)

- Oct 12, 2018 (152)
72 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 25981230 (NC_000009.11:92099903::TG 1349/3854)
Row 25981231 (NC_000009.11:92099903:TGTG: 1026/3854)

- Oct 12, 2018 (152)
73 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 330705062 (NC_000009.12:89484988::TG 37432/137802)
Row 330705063 (NC_000009.12:89484988::TGTG 3642/137934)
Row 330705064 (NC_000009.12:89484988::TGTGTG 840/137940)...

- Apr 26, 2021 (155)
74 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 330705062 (NC_000009.12:89484988::TG 37432/137802)
Row 330705063 (NC_000009.12:89484988::TGTG 3642/137934)
Row 330705064 (NC_000009.12:89484988::TGTGTG 840/137940)...

- Apr 26, 2021 (155)
75 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 330705062 (NC_000009.12:89484988::TG 37432/137802)
Row 330705063 (NC_000009.12:89484988::TGTG 3642/137934)
Row 330705064 (NC_000009.12:89484988::TGTGTG 840/137940)...

- Apr 26, 2021 (155)
76 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 330705062 (NC_000009.12:89484988::TG 37432/137802)
Row 330705063 (NC_000009.12:89484988::TGTG 3642/137934)
Row 330705064 (NC_000009.12:89484988::TGTGTG 840/137940)...

- Apr 26, 2021 (155)
77 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 330705062 (NC_000009.12:89484988::TG 37432/137802)
Row 330705063 (NC_000009.12:89484988::TGTG 3642/137934)
Row 330705064 (NC_000009.12:89484988::TGTGTG 840/137940)...

- Apr 26, 2021 (155)
78 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 330705062 (NC_000009.12:89484988::TG 37432/137802)
Row 330705063 (NC_000009.12:89484988::TGTG 3642/137934)
Row 330705064 (NC_000009.12:89484988::TGTGTG 840/137940)...

- Apr 26, 2021 (155)
79 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 330705062 (NC_000009.12:89484988::TG 37432/137802)
Row 330705063 (NC_000009.12:89484988::TGTG 3642/137934)
Row 330705064 (NC_000009.12:89484988::TGTGTG 840/137940)...

- Apr 26, 2021 (155)
80 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 330705062 (NC_000009.12:89484988::TG 37432/137802)
Row 330705063 (NC_000009.12:89484988::TGTG 3642/137934)
Row 330705064 (NC_000009.12:89484988::TGTGTG 840/137940)...

- Apr 26, 2021 (155)
81 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22635645 (NC_000009.12:89484992::TGTG 80/1832)
Row 22635646 (NC_000009.12:89484992::TG 32/1832)
Row 22635647 (NC_000009.12:89484990:TG: 71/1832)...

- Apr 26, 2020 (154)
82 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22635645 (NC_000009.12:89484992::TGTG 80/1832)
Row 22635646 (NC_000009.12:89484992::TG 32/1832)
Row 22635647 (NC_000009.12:89484990:TG: 71/1832)...

- Apr 26, 2020 (154)
83 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22635645 (NC_000009.12:89484992::TGTG 80/1832)
Row 22635646 (NC_000009.12:89484992::TG 32/1832)
Row 22635647 (NC_000009.12:89484990:TG: 71/1832)...

- Apr 26, 2020 (154)
84 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22635645 (NC_000009.12:89484992::TGTG 80/1832)
Row 22635646 (NC_000009.12:89484992::TG 32/1832)
Row 22635647 (NC_000009.12:89484990:TG: 71/1832)...

- Apr 26, 2020 (154)
85 Korean Genome Project

Submission ignored due to conflicting rows:
Row 22635645 (NC_000009.12:89484992::TGTG 80/1832)
Row 22635646 (NC_000009.12:89484992::TG 32/1832)
Row 22635647 (NC_000009.12:89484990:TG: 71/1832)...

- Apr 26, 2020 (154)
86 8.3KJPN

Submission ignored due to conflicting rows:
Row 52175987 (NC_000009.11:92099903::TGTG 1738/16760)
Row 52175988 (NC_000009.11:92099903::TG 235/16760)
Row 52175989 (NC_000009.11:92099903:TGTG: 4/16760)...

- Apr 26, 2021 (155)
87 8.3KJPN

Submission ignored due to conflicting rows:
Row 52175987 (NC_000009.11:92099903::TGTG 1738/16760)
Row 52175988 (NC_000009.11:92099903::TG 235/16760)
Row 52175989 (NC_000009.11:92099903:TGTG: 4/16760)...

- Apr 26, 2021 (155)
88 8.3KJPN

Submission ignored due to conflicting rows:
Row 52175987 (NC_000009.11:92099903::TGTG 1738/16760)
Row 52175988 (NC_000009.11:92099903::TG 235/16760)
Row 52175989 (NC_000009.11:92099903:TGTG: 4/16760)...

- Apr 26, 2021 (155)
89 8.3KJPN

Submission ignored due to conflicting rows:
Row 52175987 (NC_000009.11:92099903::TGTG 1738/16760)
Row 52175988 (NC_000009.11:92099903::TG 235/16760)
Row 52175989 (NC_000009.11:92099903:TGTG: 4/16760)...

- Apr 26, 2021 (155)
90 8.3KJPN

Submission ignored due to conflicting rows:
Row 52175987 (NC_000009.11:92099903::TGTG 1738/16760)
Row 52175988 (NC_000009.11:92099903::TG 235/16760)
Row 52175989 (NC_000009.11:92099903:TGTG: 4/16760)...

- Apr 26, 2021 (155)
91 14KJPN

Submission ignored due to conflicting rows:
Row 72247525 (NC_000009.12:89484988::TGTG 2785/28242)
Row 72247526 (NC_000009.12:89484988::TGTGTG 24/28242)
Row 72247527 (NC_000009.12:89484988:TG: 25/28242)...

- Oct 16, 2022 (156)
92 14KJPN

Submission ignored due to conflicting rows:
Row 72247525 (NC_000009.12:89484988::TGTG 2785/28242)
Row 72247526 (NC_000009.12:89484988::TGTGTG 24/28242)
Row 72247527 (NC_000009.12:89484988:TG: 25/28242)...

- Oct 16, 2022 (156)
93 14KJPN

Submission ignored due to conflicting rows:
Row 72247525 (NC_000009.12:89484988::TGTG 2785/28242)
Row 72247526 (NC_000009.12:89484988::TGTGTG 24/28242)
Row 72247527 (NC_000009.12:89484988:TG: 25/28242)...

- Oct 16, 2022 (156)
94 14KJPN

Submission ignored due to conflicting rows:
Row 72247525 (NC_000009.12:89484988::TGTG 2785/28242)
Row 72247526 (NC_000009.12:89484988::TGTGTG 24/28242)
Row 72247527 (NC_000009.12:89484988:TG: 25/28242)...

- Oct 16, 2022 (156)
95 14KJPN

Submission ignored due to conflicting rows:
Row 72247525 (NC_000009.12:89484988::TGTG 2785/28242)
Row 72247526 (NC_000009.12:89484988::TGTGTG 24/28242)
Row 72247527 (NC_000009.12:89484988:TG: 25/28242)...

- Oct 16, 2022 (156)
96 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 25981230 (NC_000009.11:92099903::TG 1327/3708)
Row 25981231 (NC_000009.11:92099903:TGTG: 936/3708)

- Oct 12, 2018 (152)
97 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 25981230 (NC_000009.11:92099903::TG 1327/3708)
Row 25981231 (NC_000009.11:92099903:TGTG: 936/3708)

- Oct 12, 2018 (152)
98 ALFA NC_000009.12 - 89484989 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs145548392 Sep 17, 2011 (135)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGT

(self)
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT

(self)
ss3724276174, ss4205266342 NC_000009.12:89484988:TGTGTG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT

(self)
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT

(self)
ss327234631, ss551956489 NC_000009.10:91289723:TGTG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
46778301, ss1368430590, ss1706466777, ss1706466827, ss1806051323, ss3005197897, ss5194206682, ss5829414982 NC_000009.11:92099903:TGTG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
ss554470531 NC_000009.11:92099922:GTGT: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
ss3812556770, ss3966257648, ss4205266341, ss5477290604, ss5738410424 NC_000009.12:89484988:TGTG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
ss3724276175 NC_000009.12:89484990:TGTG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
ss194029485 NT_008470.20:21264436:TGTG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT

(self)
ss327161701, ss553382635 NC_000009.10:91289723:TG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
ss663940892, ss5194206683 NC_000009.11:92099903:TG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
ss4205266340, ss5477290603, ss5738410423 NC_000009.12:89484988:TG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
ss3966257646 NC_000009.12:89484990:TG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
ss3724276176 NC_000009.12:89484992:TG: NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT

(self)
ss256119749 NC_000009.10:91289723::TG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss666475263, ss1806051322, ss3786459702, ss3791669627, ss3796551042, ss3831735034, ss3839395668, ss5194206681, ss5829414981 NC_000009.11:92099903::TG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss1368430593, ss1710430777, ss1710430906 NC_000009.11:92099907::TG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3066257861, ss3649189283, ss3844858915, ss4205266335, ss5281336455, ss5477290601, ss5738410425 NC_000009.12:89484988::TG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3812556771, ss3966257645 NC_000009.12:89484992::TG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3724276177 NC_000009.12:89484994::TG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss287847794 NT_008470.19:21264458::GT NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss5194206680 NC_000009.11:92099903::TGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss1368430596 NC_000009.11:92099907::TGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4205266336, ss5477290605, ss5738410421, ss5856831428 NC_000009.12:89484988::TGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3812556769, ss3966257644 NC_000009.12:89484992::TGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3724276178 NC_000009.12:89484994::TGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss5194206684 NC_000009.11:92099903::TGTGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4205266337, ss5281336456, ss5477290602, ss5738410422 NC_000009.12:89484988::TGTGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss3966257647 NC_000009.12:89484992::TGTGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4205266338 NC_000009.12:89484988::TGTGTGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
2942870489 NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
ss4205266339 NC_000009.12:89484988::TGTGTGTGTG NC_000009.12:89484988:TGTGTGTGTGTG…

NC_000009.12:89484988:TGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs111818272

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d