Name: rs112744108
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs112744108

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr13:112069446-112069456 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTTT / delTT / delT / dupT / dup…
delTTT / delTT / delT / dupT / dupTT / dupTTT
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.118093 (31258/264690, TOPMED)
delT=0.04261 (664/15582, ALFA)
delT=0.1470 (736/5008, 1000G) (+ 3 more)
delT=0.0900 (347/3854, ALSPAC)
delT=0.0922 (342/3708, TWINSUK)
delT=0.15 (6/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SOX1-OT : Intron Variant
SOX1 : 3 Prime UTR Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	15582	TTTTTTTTTTT=0.95232	TTTTTTTTT=0.00000, TTTTTTTTTT=0.04261, TTTTTTTTTTTT=0.00507, TTTTTTTTTTTTT=0.00000	0.919865	0.005187	0.074948	28
European	Sub	12556	TTTTTTTTTTT=0.94202	TTTTTTTTT=0.00000, TTTTTTTTTT=0.05169, TTTTTTTTTTTT=0.00629, TTTTTTTTTTTTT=0.00000	0.902404	0.00613	0.091466	17
African	Sub	1884	TTTTTTTTTTT=0.9931	TTTTTTTTT=0.0000, TTTTTTTTTT=0.0069, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000	0.988323	0.002123	0.009554	32
African Others	Sub	56	TTTTTTTTTTT=0.96	TTTTTTTTT=0.00, TTTTTTTTTT=0.04, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	0.928571	0.0	0.071429	0
African American	Sub	1828	TTTTTTTTTTT=0.9940	TTTTTTTTT=0.0000, TTTTTTTTTT=0.0060, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000	0.990153	0.002188	0.007659	32
Asian	Sub	82	TTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	60	TTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	22	TTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	98	TTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	522	TTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	64	TTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	376	TTTTTTTTTTT=0.995	TTTTTTTTT=0.000, TTTTTTTTTT=0.005, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000	0.989362	0.0	0.010638	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(T)₁₁=0.881907	delT=0.118093
Allele Frequency Aggregator	Total	Global	15582	(T)₁₁=0.95232	delTT=0.00000, delT=0.04261, dupT=0.00507, dupTT=0.00000
Allele Frequency Aggregator	European	Sub	12556	(T)₁₁=0.94202	delTT=0.00000, delT=0.05169, dupT=0.00629, dupTT=0.00000
Allele Frequency Aggregator	African	Sub	1884	(T)₁₁=0.9931	delTT=0.0000, delT=0.0069, dupT=0.0000, dupTT=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	522	(T)₁₁=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Other	Sub	376	(T)₁₁=0.995	delTT=0.000, delT=0.005, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Latin American 1	Sub	98	(T)₁₁=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	Asian	Sub	82	(T)₁₁=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	South Asian	Sub	64	(T)₁₁=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
1000Genomes	Global	Study-wide	5008	(T)₁₁=0.8530	delT=0.1470
1000Genomes	African	Sub	1322	(T)₁₁=0.7746	delT=0.2254
1000Genomes	East Asian	Sub	1008	(T)₁₁=0.9058	delT=0.0942
1000Genomes	Europe	Sub	1006	(T)₁₁=0.9085	delT=0.0915
1000Genomes	South Asian	Sub	978	(T)₁₁=0.814	delT=0.186
1000Genomes	American	Sub	694	(T)₁₁=0.901	delT=0.099
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(T)₁₁=0.9100	delT=0.0900
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(T)₁₁=0.9078	delT=0.0922
The Danish reference pan genome	Danish	Study-wide	40	(T)₁₁=0.85	delT=0.15

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 13	NC_000013.11:g.112069454_112069456del
GRCh38.p14 chr 13	NC_000013.11:g.112069455_112069456del
GRCh38.p14 chr 13	NC_000013.11:g.112069456del
GRCh38.p14 chr 13	NC_000013.11:g.112069456dup
GRCh38.p14 chr 13	NC_000013.11:g.112069455_112069456dup
GRCh38.p14 chr 13	NC_000013.11:g.112069454_112069456dup
GRCh37.p13 chr 13	NC_000013.10:g.112723768_112723770del
GRCh37.p13 chr 13	NC_000013.10:g.112723769_112723770del
GRCh37.p13 chr 13	NC_000013.10:g.112723770del
GRCh37.p13 chr 13	NC_000013.10:g.112723770dup
GRCh37.p13 chr 13	NC_000013.10:g.112723769_112723770dup
GRCh37.p13 chr 13	NC_000013.10:g.112723768_112723770dup

Gene: SOX1, SRY-box transcription factor 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SOX1 transcript	NM_005986.3:c.612_622=	N/A	3 Prime UTR Variant

Gene: SOX1-OT, SOX1 overlapping transcript (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SOX1-OT transcript variant 1	NR_120392.1:n.	N/A	Intron Variant
SOX1-OT transcript variant 2	NR_120394.1:n.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₁=	delTTT	delTT	delT	dupT	dupTT	dupTTT
GRCh38.p14 chr 13	NC_000013.11:g.112069446_112069456=	NC_000013.11:g.112069454_112069456del	NC_000013.11:g.112069455_112069456del	NC_000013.11:g.112069456del	NC_000013.11:g.112069456dup	NC_000013.11:g.112069455_112069456dup	NC_000013.11:g.112069454_112069456dup
GRCh37.p13 chr 13	NC_000013.10:g.112723760_112723770=	NC_000013.10:g.112723768_112723770del	NC_000013.10:g.112723769_112723770del	NC_000013.10:g.112723770del	NC_000013.10:g.112723770dup	NC_000013.10:g.112723769_112723770dup	NC_000013.10:g.112723768_112723770dup
SOX1 transcript	NM_005986.3:c.612_622=	NM_005986.3:c.620_622del	NM_005986.3:c.621_622del	NM_005986.3:c.*622del	NM_005986.3:c.*622dup	NM_005986.3:c.621_622dup	NM_005986.3:c.620_622dup
SOX1 transcript	NM_005986.2:c.612_622=	NM_005986.2:c.620_622del	NM_005986.2:c.621_622del	NM_005986.2:c.*622del	NM_005986.2:c.*622dup	NM_005986.2:c.621_622dup	NM_005986.2:c.620_622dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

48 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	BUSHMAN	ss193339761	Jul 04, 2010 (132)
2	GMI	ss289205273	May 04, 2012 (137)
3	SSMP	ss664161482	Apr 01, 2015 (144)
4	1000GENOMES	ss1373730034	Aug 21, 2014 (142)
5	EVA_GENOME_DK	ss1574713402	Apr 01, 2015 (144)
6	EVA_UK10K_ALSPAC	ss1707958556	Apr 01, 2015 (144)
7	EVA_UK10K_TWINSUK	ss1707958606	Apr 01, 2015 (144)
8	HAMMER_LAB	ss1807806666	Sep 08, 2015 (146)
9	JJLAB	ss2031212769	Sep 14, 2016 (149)
10	SYSTEMSBIOZJU	ss2628436365	Nov 08, 2017 (151)
11	SWEGEN	ss3011742974	Nov 08, 2017 (151)
12	MCHAISSO	ss3064617083	Nov 08, 2017 (151)
13	MCHAISSO	ss3065543094	Nov 08, 2017 (151)
14	BIOINF_KMB_FNS_UNIBA	ss3645330975	Oct 12, 2018 (152)
15	BIOINF_KMB_FNS_UNIBA	ss3645330976	Oct 12, 2018 (152)
16	EVA_DECODE	ss3696169632	Jul 13, 2019 (153)
17	EVA_DECODE	ss3696169633	Jul 13, 2019 (153)
18	EVA_DECODE	ss3696169634	Jul 13, 2019 (153)
19	ACPOP	ss3740150085	Jul 13, 2019 (153)
20	ACPOP	ss3740150086	Jul 13, 2019 (153)
21	PACBIO	ss3787589355	Jul 13, 2019 (153)
22	KHV_HUMAN_GENOMES	ss3817342858	Jul 13, 2019 (153)
23	EVA	ss3833784298	Apr 27, 2020 (154)
24	EVA	ss3840483555	Apr 27, 2020 (154)
25	EVA	ss3845971671	Apr 27, 2020 (154)
26	KOGIC	ss3974397259	Apr 27, 2020 (154)
27	KOGIC	ss3974397260	Apr 27, 2020 (154)
28	GNOMAD	ss4273563040	Apr 26, 2021 (155)
29	GNOMAD	ss4273563041	Apr 26, 2021 (155)
30	GNOMAD	ss4273563043	Apr 26, 2021 (155)
31	GNOMAD	ss4273563044	Apr 26, 2021 (155)
32	TOPMED	ss4961963071	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5211978615	Apr 26, 2021 (155)
34	TOMMO_GENOMICS	ss5211978616	Apr 26, 2021 (155)
35	TOMMO_GENOMICS	ss5211978617	Apr 26, 2021 (155)
36	TOMMO_GENOMICS	ss5211978618	Apr 26, 2021 (155)
37	1000G_HIGH_COVERAGE	ss5295273142	Oct 16, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5295273143	Oct 16, 2022 (156)
39	1000G_HIGH_COVERAGE	ss5295273144	Oct 16, 2022 (156)
40	HUGCELL_USP	ss5489484084	Oct 16, 2022 (156)
41	HUGCELL_USP	ss5489484085	Oct 16, 2022 (156)
42	HUGCELL_USP	ss5489484086	Oct 16, 2022 (156)
43	TOMMO_GENOMICS	ss5764398843	Oct 16, 2022 (156)
44	TOMMO_GENOMICS	ss5764398844	Oct 16, 2022 (156)
45	TOMMO_GENOMICS	ss5764398846	Oct 16, 2022 (156)
46	TOMMO_GENOMICS	ss5764398847	Oct 16, 2022 (156)
47	EVA	ss5850926151	Oct 16, 2022 (156)
48	EVA	ss5947122553	Oct 16, 2022 (156)
49	1000Genomes	NC_000013.10 - 112723760	Oct 12, 2018 (152)
50	The Avon Longitudinal Study of Parents and Children	NC_000013.10 - 112723760	Oct 12, 2018 (152)
51	The Danish reference pan genome	NC_000013.10 - 112723760	Apr 27, 2020 (154)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 443588673 (NC_000013.11:112069445::T 2161/134194) Row 443588674 (NC_000013.11:112069445::TT 5/134266) Row 443588676 (NC_000013.11:112069445:T: 16478/134068)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 443588673 (NC_000013.11:112069445::T 2161/134194) Row 443588674 (NC_000013.11:112069445::TT 5/134266) Row 443588676 (NC_000013.11:112069445:T: 16478/134068)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 443588673 (NC_000013.11:112069445::T 2161/134194) Row 443588674 (NC_000013.11:112069445::TT 5/134266) Row 443588676 (NC_000013.11:112069445:T: 16478/134068)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 443588673 (NC_000013.11:112069445::T 2161/134194) Row 443588674 (NC_000013.11:112069445::TT 5/134266) Row 443588676 (NC_000013.11:112069445:T: 16478/134068)...	-	Apr 26, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 443588673 (NC_000013.11:112069445::T 2161/134194) Row 443588674 (NC_000013.11:112069445::TT 5/134266) Row 443588676 (NC_000013.11:112069445:T: 16478/134068)...	-	Apr 26, 2021 (155)
57	Korean Genome Project Submission ignored due to conflicting rows: Row 30775260 (NC_000013.11:112069446::T 129/1832) Row 30775261 (NC_000013.11:112069445:T: 254/1832)	-	Apr 27, 2020 (154)
58	Korean Genome Project Submission ignored due to conflicting rows: Row 30775260 (NC_000013.11:112069446::T 129/1832) Row 30775261 (NC_000013.11:112069445:T: 254/1832)	-	Apr 27, 2020 (154)
59	Northern Sweden Submission ignored due to conflicting rows: Row 13434950 (NC_000013.10:112723759::T 8/600) Row 13434951 (NC_000013.10:112723759:T: 59/600)	-	Jul 13, 2019 (153)
60	Northern Sweden Submission ignored due to conflicting rows: Row 13434950 (NC_000013.10:112723759::T 8/600) Row 13434951 (NC_000013.10:112723759:T: 59/600)	-	Jul 13, 2019 (153)
61	8.3KJPN Submission ignored due to conflicting rows: Row 69947922 (NC_000013.10:112723759:T: 2298/16760) Row 69947923 (NC_000013.10:112723759::T 1464/16760) Row 69947924 (NC_000013.10:112723759:TT: 1/16760)...	-	Apr 26, 2021 (155)
62	8.3KJPN Submission ignored due to conflicting rows: Row 69947922 (NC_000013.10:112723759:T: 2298/16760) Row 69947923 (NC_000013.10:112723759::T 1464/16760) Row 69947924 (NC_000013.10:112723759:TT: 1/16760)...	-	Apr 26, 2021 (155)
63	8.3KJPN Submission ignored due to conflicting rows: Row 69947922 (NC_000013.10:112723759:T: 2298/16760) Row 69947923 (NC_000013.10:112723759::T 1464/16760) Row 69947924 (NC_000013.10:112723759:TT: 1/16760)...	-	Apr 26, 2021 (155)
64	8.3KJPN Submission ignored due to conflicting rows: Row 69947922 (NC_000013.10:112723759:T: 2298/16760) Row 69947923 (NC_000013.10:112723759::T 1464/16760) Row 69947924 (NC_000013.10:112723759:TT: 1/16760)...	-	Apr 26, 2021 (155)
65	14KJPN Submission ignored due to conflicting rows: Row 98235947 (NC_000013.11:112069445::T 2493/28258) Row 98235948 (NC_000013.11:112069445:T: 3963/28258) Row 98235950 (NC_000013.11:112069445:TT: 1/28258)...	-	Oct 16, 2022 (156)
66	14KJPN Submission ignored due to conflicting rows: Row 98235947 (NC_000013.11:112069445::T 2493/28258) Row 98235948 (NC_000013.11:112069445:T: 3963/28258) Row 98235950 (NC_000013.11:112069445:TT: 1/28258)...	-	Oct 16, 2022 (156)
67	14KJPN Submission ignored due to conflicting rows: Row 98235947 (NC_000013.11:112069445::T 2493/28258) Row 98235948 (NC_000013.11:112069445:T: 3963/28258) Row 98235950 (NC_000013.11:112069445:TT: 1/28258)...	-	Oct 16, 2022 (156)
68	14KJPN Submission ignored due to conflicting rows: Row 98235947 (NC_000013.11:112069445::T 2493/28258) Row 98235948 (NC_000013.11:112069445:T: 3963/28258) Row 98235950 (NC_000013.11:112069445:TT: 1/28258)...	-	Oct 16, 2022 (156)
69	TopMed	NC_000013.11 - 112069446	Apr 26, 2021 (155)
70	UK 10K study - Twins	NC_000013.10 - 112723760	Oct 12, 2018 (152)
71	ALFA	NC_000013.11 - 112069446	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4273563044	NC_000013.11:112069445:TTT:	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTT	(self)
ss1807806666, ss5211978617	NC_000013.10:112723759:TT:	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTT	(self)
ss4273563043, ss5295273143, ss5489484086, ss5764398846	NC_000013.11:112069445:TT:	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTT	(self)
13162181120	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTT	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTT	(self)
ss289205273	NC_000013.9:111771760:T:	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTT	(self)
62918453, 34967716, 434141, 34967716, ss664161482, ss1373730034, ss1574713402, ss1707958556, ss1707958606, ss2031212769, ss2628436365, ss3011742974, ss3740150086, ss3787589355, ss3833784298, ss3840483555, ss5211978615, ss5947122553	NC_000013.10:112723759:T:	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTT	(self)
177508729, ss3064617083, ss3065543094, ss3645330976, ss3696169632, ss3817342858, ss3845971671, ss3974397260, ss4961963071, ss5295273142, ss5489484084, ss5764398844, ss5850926151	NC_000013.11:112069445:T:	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTT	(self)
13162181120	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTT	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTT	(self)
ss193339761	NT_027140.7:226004:T:	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTT	(self)
ss3740150085, ss5211978616	NC_000013.10:112723759::T	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3645330975, ss4273563040, ss5295273144, ss5489484085, ss5764398843	NC_000013.11:112069445::T	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTT	(self)
13162181120	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTT	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3696169633, ss3974397259	NC_000013.11:112069446::T	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss5211978618	NC_000013.10:112723759::TT	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4273563041, ss5764398847	NC_000013.11:112069445::TT	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTTT	(self)
13162181120	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTTT	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss3696169634	NC_000013.11:112069446::TTT	NC_000013.11:112069445:TTTTTTTTTTT… NC_000013.11:112069445:TTTTTTTTTTT:TTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs112744108

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs112744108