Name: rs11287280
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11287280

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:45795332-45795341 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTT / delT / dupT
Variation Type: Indel Insertion and Deletion
Frequency: (T)₁₀=0.192674 (50999/264690, TOPMED)
(T)₁₀=0.10928 (3088/28258, 14KJPN)
(T)₁₀=0.10871 (1822/16760, 8.3KJPN) (+ 9 more)
(T)₁₀=0.3300 (2351/7124, ALFA)
(T)₁₀=0.1601 (802/5008, 1000G)
(T)₁₀=0.3054 (1367/4476, Estonian)
(T)₁₀=0.2296 (885/3854, ALSPAC)
(T)₁₀=0.2389 (886/3708, TWINSUK)
(T)₁₀=0.1403 (257/1832, Korea1K)
(T)₁₀=0.249 (249/998, GoNL)
(T)₁₀=0.262 (157/600, NorthernSweden)
(T)₁₀=0.12 (5/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SLC6A20 : Intron Variant
LOC107986082 : 2KB Upstream Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	7124	TTTTTTTTTT=0.3300	TTTTTTTT=0.0000, TTTTTTTTT=0.6697, TTTTTTTTTTT=0.0003	0.141854	0.481742	0.376404	32
European	Sub	6892	TTTTTTTTTT=0.3228	TTTTTTTT=0.0000, TTTTTTTTT=0.6769, TTTTTTTTTTT=0.0003	0.130662	0.484901	0.384437	27
African	Sub	132	TTTTTTTTTT=0.470	TTTTTTTT=0.000, TTTTTTTTT=0.530, TTTTTTTTTTT=0.000	0.378788	0.439394	0.181818	15
African Others	Sub	8	TTTTTTTTTT=0.4	TTTTTTTT=0.0, TTTTTTTTT=0.6, TTTTTTTTTTT=0.0	0.25	0.5	0.25	1
African American	Sub	124	TTTTTTTTTT=0.476	TTTTTTTT=0.000, TTTTTTTTT=0.524, TTTTTTTTTTT=0.000	0.387097	0.435484	0.177419	14
Asian	Sub	6	TTTTTTTTTT=0.3	TTTTTTTT=0.0, TTTTTTTTT=0.7, TTTTTTTTTTT=0.0	0.333333	0.666667	0.0	2
East Asian	Sub	4	TTTTTTTTTT=0.5	TTTTTTTT=0.0, TTTTTTTTT=0.5, TTTTTTTTTTT=0.0	0.5	0.5	0.0	1
Other Asian	Sub	2	TTTTTTTTTT=0.0	TTTTTTTT=0.0, TTTTTTTTT=1.0, TTTTTTTTTTT=0.0	0.0	1.0	0.0	N/A
Latin American 1	Sub	2	TTTTTTTTTT=1.0	TTTTTTTT=0.0, TTTTTTTTT=0.0, TTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	40	TTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	8	TTTTTTTTTT=0.6	TTTTTTTT=0.0, TTTTTTTTT=0.4, TTTTTTTTTTT=0.0	0.5	0.25	0.25	1
Other	Sub	44	TTTTTTTTTT=0.34	TTTTTTTT=0.00, TTTTTTTTT=0.66, TTTTTTTTTTT=0.00	0.272727	0.590909	0.136364	6

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(T)₁₀=0.192674	delT=0.807326
14KJPN	JAPANESE	Study-wide	28258	(T)₁₀=0.10928	delT=0.89072
8.3KJPN	JAPANESE	Study-wide	16760	(T)₁₀=0.10871	delT=0.89129
Allele Frequency Aggregator	Total	Global	7124	(T)₁₀=0.3300	delTT=0.0000, delT=0.6697, dupT=0.0003
Allele Frequency Aggregator	European	Sub	6892	(T)₁₀=0.3228	delTT=0.0000, delT=0.6769, dupT=0.0003
Allele Frequency Aggregator	African	Sub	132	(T)₁₀=0.470	delTT=0.000, delT=0.530, dupT=0.000
Allele Frequency Aggregator	Other	Sub	44	(T)₁₀=0.34	delTT=0.00, delT=0.66, dupT=0.00
Allele Frequency Aggregator	Latin American 2	Sub	40	(T)₁₀=1.00	delTT=0.00, delT=0.00, dupT=0.00
Allele Frequency Aggregator	South Asian	Sub	8	(T)₁₀=0.6	delTT=0.0, delT=0.4, dupT=0.0
Allele Frequency Aggregator	Asian	Sub	6	(T)₁₀=0.3	delTT=0.0, delT=0.7, dupT=0.0
Allele Frequency Aggregator	Latin American 1	Sub	2	(T)₁₀=1.0	delTT=0.0, delT=0.0, dupT=0.0
1000Genomes	Global	Study-wide	5008	(T)₁₀=0.1601	delT=0.8399
1000Genomes	African	Sub	1322	(T)₁₀=0.1127	delT=0.8873
1000Genomes	East Asian	Sub	1008	(T)₁₀=0.1339	delT=0.8661
1000Genomes	Europe	Sub	1006	(T)₁₀=0.2078	delT=0.7922
1000Genomes	South Asian	Sub	978	(T)₁₀=0.153	delT=0.847
1000Genomes	American	Sub	694	(T)₁₀=0.229	delT=0.771
Genetic variation in the Estonian population	Estonian	Study-wide	4476	(T)₁₀=0.3054	delT=0.6946
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(T)₁₀=0.2296	delT=0.7704
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(T)₁₀=0.2389	delT=0.7611
Korean Genome Project	KOREAN	Study-wide	1832	(T)₁₀=0.1403	delT=0.8597
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	(T)₁₀=0.249	delT=0.751
Northern Sweden	ACPOP	Study-wide	600	(T)₁₀=0.262	delT=0.738
The Danish reference pan genome	Danish	Study-wide	40	(T)₁₀=0.12	delT=0.88

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.45795340_45795341del
GRCh38.p14 chr 3	NC_000003.12:g.45795341del
GRCh38.p14 chr 3	NC_000003.12:g.45795341dup
GRCh37.p13 chr 3	NC_000003.11:g.45836832_45836833del
GRCh37.p13 chr 3	NC_000003.11:g.45836833del
GRCh37.p13 chr 3	NC_000003.11:g.45836833dup
SLC6A20 RefSeqGene	NG_023204.1:g.6211_6212del
SLC6A20 RefSeqGene	NG_023204.1:g.6212del
SLC6A20 RefSeqGene	NG_023204.1:g.6212dup

Gene: SLC6A20, solute carrier family 6 member 20 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SLC6A20 transcript variant 3	NM_001385683.1:c.121+966_… NM_001385683.1:c.121+966_121+967del	N/A	Intron Variant
SLC6A20 transcript variant 1	NM_020208.4:c.121+966_121… NM_020208.4:c.121+966_121+967del	N/A	Intron Variant
SLC6A20 transcript variant 2	NM_022405.4:c.121+966_121… NM_022405.4:c.121+966_121+967del	N/A	Intron Variant
SLC6A20 transcript variant X2	XM_011533848.3:c.121+966_… XM_011533848.3:c.121+966_121+967del	N/A	Intron Variant
SLC6A20 transcript variant X1	XM_011533847.3:c.	N/A	Genic Upstream Transcript Variant

Gene: LOC107986082, uncharacterized LOC107986082 (plus strand) : 2KB Upstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
LOC107986082 transcript	XR_001740680.2:n.	N/A	Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₀=	delTT	delT	dupT
GRCh38.p14 chr 3	NC_000003.12:g.45795332_45795341=	NC_000003.12:g.45795340_45795341del	NC_000003.12:g.45795341del	NC_000003.12:g.45795341dup
GRCh37.p13 chr 3	NC_000003.11:g.45836824_45836833=	NC_000003.11:g.45836832_45836833del	NC_000003.11:g.45836833del	NC_000003.11:g.45836833dup
SLC6A20 RefSeqGene	NG_023204.1:g.6203_6212=	NG_023204.1:g.6211_6212del	NG_023204.1:g.6212del	NG_023204.1:g.6212dup
SLC6A20 transcript variant 3	NM_001385683.1:c.121+967=	NM_001385683.1:c.121+966_121+967del	NM_001385683.1:c.121+967del	NM_001385683.1:c.121+967dup
SLC6A20 transcript variant 1	NM_020208.3:c.121+967=	NM_020208.3:c.121+966_121+967del	NM_020208.3:c.121+967del	NM_020208.3:c.121+967dup
SLC6A20 transcript variant 1	NM_020208.4:c.121+967=	NM_020208.4:c.121+966_121+967del	NM_020208.4:c.121+967del	NM_020208.4:c.121+967dup
SLC6A20 transcript variant 2	NM_022405.3:c.121+967=	NM_022405.3:c.121+966_121+967del	NM_022405.3:c.121+967del	NM_022405.3:c.121+967dup
SLC6A20 transcript variant 2	NM_022405.4:c.121+967=	NM_022405.4:c.121+966_121+967del	NM_022405.4:c.121+967del	NM_022405.4:c.121+967dup
SLC6A20 transcript variant X1	XM_005265236.1:c.121+967=	XM_005265236.1:c.121+966_121+967del	XM_005265236.1:c.121+967del	XM_005265236.1:c.121+967dup
SLC6A20 transcript variant X2	XM_011533848.3:c.121+967=	XM_011533848.3:c.121+966_121+967del	XM_011533848.3:c.121+967del	XM_011533848.3:c.121+967dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

60 SubSNP, 15 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	DEVINE_LAB	ss15162201	Mar 15, 2016 (147)
2	ABI	ss41994397	Mar 13, 2006 (137)
3	HGSV	ss81881066	Sep 08, 2015 (146)
4	HUMANGENOME_JCVI	ss95316155	Dec 05, 2013 (138)
5	BUSHMAN	ss193669332	Jul 04, 2010 (137)
6	BL	ss255998567	May 09, 2011 (137)
7	GMI	ss287724192	May 09, 2011 (137)
8	GMI	ss288350526	May 04, 2012 (137)
9	PJP	ss295098186	May 09, 2011 (137)
10	PJP	ss295098187	May 09, 2011 (134)
11	1000GENOMES	ss326365887	May 09, 2011 (137)
12	1000GENOMES	ss326388020	May 09, 2011 (137)
13	1000GENOMES	ss326501785	May 09, 2011 (137)
14	LUNTER	ss551229278	Apr 25, 2013 (138)
15	LUNTER	ss551311569	Apr 25, 2013 (138)
16	LUNTER	ss553018178	Apr 25, 2013 (138)
17	SSMP	ss663410550	Apr 01, 2015 (144)
18	BILGI_BIOE	ss666205146	Apr 25, 2013 (138)
19	EVA-GONL	ss978543308	Aug 21, 2014 (142)
20	1000GENOMES	ss1370288141	Aug 21, 2014 (142)
21	DDI	ss1536350989	Apr 01, 2015 (144)
22	EVA_GENOME_DK	ss1575930489	Apr 01, 2015 (144)
23	EVA_UK10K_ALSPAC	ss1703608668	Apr 01, 2015 (144)
24	EVA_UK10K_TWINSUK	ss1703608786	Apr 01, 2015 (144)
25	HAMMER_LAB	ss1799228097	Sep 08, 2015 (146)
26	JJLAB	ss2030510700	Sep 14, 2016 (149)
27	SYSTEMSBIOZJU	ss2625225120	Nov 08, 2017 (151)
28	SWEGEN	ss2992234657	Nov 08, 2017 (151)
29	MCHAISSO	ss3064045452	Nov 08, 2017 (151)
30	MCHAISSO	ss3064906108	Nov 08, 2017 (151)
31	MCHAISSO	ss3065878232	Nov 08, 2017 (151)
32	BEROUKHIMLAB	ss3644124347	Oct 12, 2018 (152)
33	BIOINF_KMB_FNS_UNIBA	ss3645710302	Oct 12, 2018 (152)
34	URBANLAB	ss3647393138	Oct 12, 2018 (152)
35	EGCUT_WGS	ss3660154537	Jul 13, 2019 (153)
36	EVA_DECODE	ss3709136252	Jul 13, 2019 (153)
37	ACPOP	ss3729848743	Jul 13, 2019 (153)
38	PACBIO	ss3784301223	Jul 13, 2019 (153)
39	PACBIO	ss3789820006	Jul 13, 2019 (153)
40	PACBIO	ss3794693858	Jul 13, 2019 (153)
41	KHV_HUMAN_GENOMES	ss3803117422	Jul 13, 2019 (153)
42	EVA	ss3827787995	Apr 25, 2020 (154)
43	EVA	ss3837316557	Apr 25, 2020 (154)
44	EVA	ss3842741789	Apr 25, 2020 (154)
45	KOGIC	ss3951151887	Apr 25, 2020 (154)
46	GNOMAD	ss4070168300	Apr 26, 2021 (155)
47	GNOMAD	ss4070168302	Apr 26, 2021 (155)
48	GNOMAD	ss4070168303	Apr 26, 2021 (155)
49	TOPMED	ss4562903679	Apr 26, 2021 (155)
50	TOMMO_GENOMICS	ss5158920282	Apr 26, 2021 (155)
51	1000G_HIGH_COVERAGE	ss5253918668	Oct 13, 2022 (156)
52	HUGCELL_USP	ss5453327265	Oct 13, 2022 (156)
53	HUGCELL_USP	ss5453327266	Oct 13, 2022 (156)
54	TOMMO_GENOMICS	ss5690504464	Oct 13, 2022 (156)
55	YY_MCH	ss5803699774	Oct 13, 2022 (156)
56	EVA	ss5825689927	Oct 13, 2022 (156)
57	EVA	ss5825689928	Oct 13, 2022 (156)
58	EVA	ss5853595503	Oct 13, 2022 (156)
59	EVA	ss5868639331	Oct 13, 2022 (156)
60	EVA	ss5960330425	Oct 13, 2022 (156)
61	1000Genomes	NC_000003.11 - 45836824	Oct 12, 2018 (152)
62	The Avon Longitudinal Study of Parents and Children	NC_000003.11 - 45836824	Oct 12, 2018 (152)
63	Genetic variation in the Estonian population	NC_000003.11 - 45836824	Oct 12, 2018 (152)
64	The Danish reference pan genome	NC_000003.11 - 45836824	Apr 25, 2020 (154)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106291962 (NC_000003.12:45795331::T 10/139638) Row 106291964 (NC_000003.12:45795331:T: 110971/139580) Row 106291965 (NC_000003.12:45795331:TT: 10/139638)	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106291962 (NC_000003.12:45795331::T 10/139638) Row 106291964 (NC_000003.12:45795331:T: 110971/139580) Row 106291965 (NC_000003.12:45795331:TT: 10/139638)	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 106291962 (NC_000003.12:45795331::T 10/139638) Row 106291964 (NC_000003.12:45795331:T: 110971/139580) Row 106291965 (NC_000003.12:45795331:TT: 10/139638)	-	Apr 26, 2021 (155)
68	Genome of the Netherlands Release 5	NC_000003.11 - 45836824	Apr 25, 2020 (154)
69	Korean Genome Project	NC_000003.12 - 45795332	Apr 25, 2020 (154)
70	Northern Sweden	NC_000003.11 - 45836824	Jul 13, 2019 (153)
71	8.3KJPN	NC_000003.11 - 45836824	Apr 26, 2021 (155)
72	14KJPN	NC_000003.12 - 45795332	Oct 13, 2022 (156)
73	TopMed	NC_000003.12 - 45795332	Apr 26, 2021 (155)
74	UK 10K study - Twins	NC_000003.11 - 45836824	Oct 12, 2018 (152)
75	ALFA	NC_000003.12 - 45795332	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs869046212	Jul 19, 2016 (147)
rs34411091	May 23, 2006 (127)
rs34447379	May 11, 2012 (137)
rs59878385	May 25, 2008 (130)
rs72174108	May 11, 2012 (137)
rs146345897	May 04, 2012 (137)
rs373594501	May 13, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5825689928	NC_000003.11:45836823:TT:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTT
ss4070168303, ss5453327266	NC_000003.12:45795331:TT:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTT	(self)
1959154611	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTT	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTT	(self)
ss81881066	NC_000003.9:45811836:T:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
ss255998567, ss288350526, ss295098186, ss326365887, ss326388020, ss326501785, ss551229278, ss551311569, ss553018178	NC_000003.10:45811827:T:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
ss295098187	NC_000003.10:45811836:T:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
14989574, 8334460, 5892785, 822315, 3659890, 3133608, 16889589, 8334460, ss663410550, ss666205146, ss978543308, ss1370288141, ss1536350989, ss1575930489, ss1703608668, ss1703608786, ss1799228097, ss2030510700, ss2625225120, ss2992234657, ss3644124347, ss3660154537, ss3729848743, ss3784301223, ss3789820006, ss3794693858, ss3827787995, ss3837316557, ss5158920282, ss5825689927, ss5960330425	NC_000003.11:45836823:T:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
7529888, 24341568, 400281234, ss3064045452, ss3064906108, ss3065878232, ss3645710302, ss3647393138, ss3709136252, ss3803117422, ss3842741789, ss3951151887, ss4070168302, ss4562903679, ss5253918668, ss5453327265, ss5690504464, ss5803699774, ss5853595503, ss5868639331	NC_000003.12:45795331:T:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
1959154611	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
ss41994397, ss287724192	NT_022517.18:45776823:T:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
ss15162201, ss95316155	NT_022517.18:45776832:T:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
ss193669332	NT_022517.19:45785331:T:	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTT	(self)
ss4070168300	NC_000003.12:45795331::T	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTTTT	(self)
1959154611	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTTTT	NC_000003.12:45795331:TTTTTTTTTT:T… NC_000003.12:45795331:TTTTTTTTTT:TTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11287280

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11287280