Name: rs11290546
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11290546

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr4:39505905-39505919 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delAAA / delAA / delA / dupA / dup…
delAAA / delAA / delA / dupA / dupAA / dupAAA
Variation Type: Indel Insertion and Deletion
Frequency: delA=0.05019 (518/10320, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: UGDH : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	10320	AAAAAAAAAAAAAAA=0.90581	AAAAAAAAAAAA=0.00000, AAAAAAAAAAAAA=0.00000, AAAAAAAAAAAAAA=0.05019, AAAAAAAAAAAAAAAA=0.02955, AAAAAAAAAAAAAAAAA=0.01444, AAAAAAAAAAAAAAAAAA=0.00000	0.908342	0.006547	0.085111	20
European	Sub	9020	AAAAAAAAAAAAAAA=0.8927	AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0573, AAAAAAAAAAAAAAAA=0.0336, AAAAAAAAAAAAAAAAA=0.0164, AAAAAAAAAAAAAAAAAA=0.0000	0.894054	0.007585	0.098361	15
African	Sub	752	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
African Others	Sub	30	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African American	Sub	722	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
Asian	Sub	12	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	10	AAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Other Asian	Sub	2	AAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	56	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	208	AAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	54	AAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Other	Sub	218	AAAAAAAAAAAAAAA=0.982	AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.005, AAAAAAAAAAAAAAAA=0.009, AAAAAAAAAAAAAAAAA=0.005, AAAAAAAAAAAAAAAAAA=0.000	0.990654	0.0	0.009346	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	10320	(A)₁₅=0.90581	delAAA=0.00000, delAA=0.00000, delA=0.05019, dupA=0.02955, dupAA=0.01444, dupAAA=0.00000
Allele Frequency Aggregator	European	Sub	9020	(A)₁₅=0.8927	delAAA=0.0000, delAA=0.0000, delA=0.0573, dupA=0.0336, dupAA=0.0164, dupAAA=0.0000
Allele Frequency Aggregator	African	Sub	752	(A)₁₅=1.000	delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000
Allele Frequency Aggregator	Other	Sub	218	(A)₁₅=0.982	delAAA=0.000, delAA=0.000, delA=0.005, dupA=0.009, dupAA=0.005, dupAAA=0.000
Allele Frequency Aggregator	Latin American 2	Sub	208	(A)₁₅=1.000	delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000
Allele Frequency Aggregator	Latin American 1	Sub	56	(A)₁₅=1.00	delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator	South Asian	Sub	54	(A)₁₅=1.00	delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator	Asian	Sub	12	(A)₁₅=1.00	delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 4	NC_000004.12:g.39505917_39505919del
GRCh38.p14 chr 4	NC_000004.12:g.39505918_39505919del
GRCh38.p14 chr 4	NC_000004.12:g.39505919del
GRCh38.p14 chr 4	NC_000004.12:g.39505919dup
GRCh38.p14 chr 4	NC_000004.12:g.39505918_39505919dup
GRCh38.p14 chr 4	NC_000004.12:g.39505917_39505919dup
GRCh37.p13 chr 4	NC_000004.11:g.39507537_39507539del
GRCh37.p13 chr 4	NC_000004.11:g.39507538_39507539del
GRCh37.p13 chr 4	NC_000004.11:g.39507539del
GRCh37.p13 chr 4	NC_000004.11:g.39507539dup
GRCh37.p13 chr 4	NC_000004.11:g.39507538_39507539dup
GRCh37.p13 chr 4	NC_000004.11:g.39507537_39507539dup

Gene: UGDH, UDP-glucose 6-dehydrogenase (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
UGDH transcript variant 2	NM_001184700.2:c.706-159_… NM_001184700.2:c.706-159_706-157del	N/A	Intron Variant
UGDH transcript variant 3	NM_001184701.2:c.616-159_… NM_001184701.2:c.616-159_616-157del	N/A	Intron Variant
UGDH transcript variant 1	NM_003359.4:c.907-159_907… NM_003359.4:c.907-159_907-157del	N/A	Intron Variant
UGDH transcript variant X1	XM_005262667.4:c.946-159_… XM_005262667.4:c.946-159_946-157del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₅=	delAAA	delAA	delA	dupA	dupAA	dupAAA
GRCh38.p14 chr 4	NC_000004.12:g.39505905_39505919=	NC_000004.12:g.39505917_39505919del	NC_000004.12:g.39505918_39505919del	NC_000004.12:g.39505919del	NC_000004.12:g.39505919dup	NC_000004.12:g.39505918_39505919dup	NC_000004.12:g.39505917_39505919dup
GRCh37.p13 chr 4	NC_000004.11:g.39507525_39507539=	NC_000004.11:g.39507537_39507539del	NC_000004.11:g.39507538_39507539del	NC_000004.11:g.39507539del	NC_000004.11:g.39507539dup	NC_000004.11:g.39507538_39507539dup	NC_000004.11:g.39507537_39507539dup
UGDH transcript variant 2	NM_001184700.1:c.706-157=	NM_001184700.1:c.706-159_706-157del	NM_001184700.1:c.706-158_706-157del	NM_001184700.1:c.706-157del	NM_001184700.1:c.706-157dup	NM_001184700.1:c.706-158_706-157dup	NM_001184700.1:c.706-159_706-157dup
UGDH transcript variant 2	NM_001184700.2:c.706-157=	NM_001184700.2:c.706-159_706-157del	NM_001184700.2:c.706-158_706-157del	NM_001184700.2:c.706-157del	NM_001184700.2:c.706-157dup	NM_001184700.2:c.706-158_706-157dup	NM_001184700.2:c.706-159_706-157dup
UGDH transcript variant 3	NM_001184701.1:c.616-157=	NM_001184701.1:c.616-159_616-157del	NM_001184701.1:c.616-158_616-157del	NM_001184701.1:c.616-157del	NM_001184701.1:c.616-157dup	NM_001184701.1:c.616-158_616-157dup	NM_001184701.1:c.616-159_616-157dup
UGDH transcript variant 3	NM_001184701.2:c.616-157=	NM_001184701.2:c.616-159_616-157del	NM_001184701.2:c.616-158_616-157del	NM_001184701.2:c.616-157del	NM_001184701.2:c.616-157dup	NM_001184701.2:c.616-158_616-157dup	NM_001184701.2:c.616-159_616-157dup
UGDH transcript variant 1	NM_003359.3:c.907-157=	NM_003359.3:c.907-159_907-157del	NM_003359.3:c.907-158_907-157del	NM_003359.3:c.907-157del	NM_003359.3:c.907-157dup	NM_003359.3:c.907-158_907-157dup	NM_003359.3:c.907-159_907-157dup
UGDH transcript variant 1	NM_003359.4:c.907-157=	NM_003359.4:c.907-159_907-157del	NM_003359.4:c.907-158_907-157del	NM_003359.4:c.907-157del	NM_003359.4:c.907-157dup	NM_003359.4:c.907-158_907-157dup	NM_003359.4:c.907-159_907-157dup
UGDH transcript variant X1	XM_005262667.1:c.946-157=	XM_005262667.1:c.946-159_946-157del	XM_005262667.1:c.946-158_946-157del	XM_005262667.1:c.946-157del	XM_005262667.1:c.946-157dup	XM_005262667.1:c.946-158_946-157dup	XM_005262667.1:c.946-159_946-157dup
UGDH transcript variant X1	XM_005262667.4:c.946-157=	XM_005262667.4:c.946-159_946-157del	XM_005262667.4:c.946-158_946-157del	XM_005262667.4:c.946-157del	XM_005262667.4:c.946-157dup	XM_005262667.4:c.946-158_946-157dup	XM_005262667.4:c.946-159_946-157dup
UGDH transcript variant X2	XM_005262668.1:c.907-157=	XM_005262668.1:c.907-159_907-157del	XM_005262668.1:c.907-158_907-157del	XM_005262668.1:c.907-157del	XM_005262668.1:c.907-157dup	XM_005262668.1:c.907-158_907-157dup	XM_005262668.1:c.907-159_907-157dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

51 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	DEVINE_LAB	ss15165761	Mar 15, 2016 (147)
2	BCMHGSC_JDW	ss103687498	Mar 15, 2016 (147)
3	GMI	ss288510456	May 04, 2012 (137)
4	GMI	ss288510458	Sep 14, 2016 (149)
5	SSMP	ss663507903	Apr 01, 2015 (144)
6	BILGI_BIOE	ss666253640	Apr 25, 2013 (138)
7	TMC_SNPDB	ss1997168348	Jul 19, 2016 (147)
8	SWEGEN	ss2994491602	Nov 08, 2017 (151)
9	MCHAISSO	ss3064963362	Nov 08, 2017 (151)
10	URBANLAB	ss3647702010	Oct 12, 2018 (152)
11	EVA_DECODE	ss3711839903	Jul 13, 2019 (153)
12	EVA_DECODE	ss3711839904	Jul 13, 2019 (153)
13	EVA_DECODE	ss3711839905	Jul 13, 2019 (153)
14	EVA_DECODE	ss3711839906	Jul 13, 2019 (153)
15	ACPOP	ss3731055820	Jul 13, 2019 (153)
16	ACPOP	ss3731055821	Jul 13, 2019 (153)
17	ACPOP	ss3731055822	Jul 13, 2019 (153)
18	EVA	ss3828485745	Apr 26, 2020 (154)
19	EVA	ss3837679311	Apr 26, 2020 (154)
20	EVA	ss3843114355	Apr 26, 2020 (154)
21	KOGIC	ss3953926996	Apr 26, 2020 (154)
22	KOGIC	ss3953926997	Apr 26, 2020 (154)
23	KOGIC	ss3953926998	Apr 26, 2020 (154)
24	KOGIC	ss3953926999	Apr 26, 2020 (154)
25	FSA-LAB	ss3984281653	Apr 26, 2021 (155)
26	GNOMAD	ss4094262658	Apr 26, 2021 (155)
27	GNOMAD	ss4094262659	Apr 26, 2021 (155)
28	GNOMAD	ss4094262660	Apr 26, 2021 (155)
29	GNOMAD	ss4094262662	Apr 26, 2021 (155)
30	GNOMAD	ss4094262663	Apr 26, 2021 (155)
31	GNOMAD	ss4094262664	Apr 26, 2021 (155)
32	TOMMO_GENOMICS	ss5165162311	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5165162312	Apr 26, 2021 (155)
34	TOMMO_GENOMICS	ss5165162313	Apr 26, 2021 (155)
35	TOMMO_GENOMICS	ss5165162314	Apr 26, 2021 (155)
36	1000G_HIGH_COVERAGE	ss5258807180	Oct 13, 2022 (156)
37	1000G_HIGH_COVERAGE	ss5258807181	Oct 13, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5258807182	Oct 13, 2022 (156)
39	1000G_HIGH_COVERAGE	ss5258807183	Oct 13, 2022 (156)
40	1000G_HIGH_COVERAGE	ss5258807184	Oct 13, 2022 (156)
41	HUGCELL_USP	ss5457632664	Oct 13, 2022 (156)
42	HUGCELL_USP	ss5457632665	Oct 13, 2022 (156)
43	HUGCELL_USP	ss5457632666	Oct 13, 2022 (156)
44	HUGCELL_USP	ss5457632667	Oct 13, 2022 (156)
45	EVA	ss5624138541	Oct 13, 2022 (156)
46	TOMMO_GENOMICS	ss5699073226	Oct 13, 2022 (156)
47	TOMMO_GENOMICS	ss5699073227	Oct 13, 2022 (156)
48	TOMMO_GENOMICS	ss5699073228	Oct 13, 2022 (156)
49	TOMMO_GENOMICS	ss5699073229	Oct 13, 2022 (156)
50	EVA	ss5843849000	Oct 13, 2022 (156)
51	EVA	ss5863023033	Oct 13, 2022 (156)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 146428280 (NC_000004.12:39505904::A 20364/132740) Row 146428281 (NC_000004.12:39505904::AA 8957/132756) Row 146428282 (NC_000004.12:39505904::AAA 227/132836)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 146428280 (NC_000004.12:39505904::A 20364/132740) Row 146428281 (NC_000004.12:39505904::AA 8957/132756) Row 146428282 (NC_000004.12:39505904::AAA 227/132836)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 146428280 (NC_000004.12:39505904::A 20364/132740) Row 146428281 (NC_000004.12:39505904::AA 8957/132756) Row 146428282 (NC_000004.12:39505904::AAA 227/132836)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 146428280 (NC_000004.12:39505904::A 20364/132740) Row 146428281 (NC_000004.12:39505904::AA 8957/132756) Row 146428282 (NC_000004.12:39505904::AAA 227/132836)...	-	Apr 26, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 146428280 (NC_000004.12:39505904::A 20364/132740) Row 146428281 (NC_000004.12:39505904::AA 8957/132756) Row 146428282 (NC_000004.12:39505904::AAA 227/132836)...	-	Apr 26, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 146428280 (NC_000004.12:39505904::A 20364/132740) Row 146428281 (NC_000004.12:39505904::AA 8957/132756) Row 146428282 (NC_000004.12:39505904::AAA 227/132836)...	-	Apr 26, 2021 (155)
58	Korean Genome Project Submission ignored due to conflicting rows: Row 10304997 (NC_000004.12:39505906::A 467/1830) Row 10304998 (NC_000004.12:39505906::AA 230/1830) Row 10304999 (NC_000004.12:39505904:AA: 15/1830)...	-	Apr 26, 2020 (154)
59	Korean Genome Project Submission ignored due to conflicting rows: Row 10304997 (NC_000004.12:39505906::A 467/1830) Row 10304998 (NC_000004.12:39505906::AA 230/1830) Row 10304999 (NC_000004.12:39505904:AA: 15/1830)...	-	Apr 26, 2020 (154)
60	Korean Genome Project Submission ignored due to conflicting rows: Row 10304997 (NC_000004.12:39505906::A 467/1830) Row 10304998 (NC_000004.12:39505906::AA 230/1830) Row 10304999 (NC_000004.12:39505904:AA: 15/1830)...	-	Apr 26, 2020 (154)
61	Korean Genome Project Submission ignored due to conflicting rows: Row 10304997 (NC_000004.12:39505906::A 467/1830) Row 10304998 (NC_000004.12:39505906::AA 230/1830) Row 10304999 (NC_000004.12:39505904:AA: 15/1830)...	-	Apr 26, 2020 (154)
62	Northern Sweden Submission ignored due to conflicting rows: Row 4340685 (NC_000004.11:39507524::AA 25/598) Row 4340686 (NC_000004.11:39507524:A: 90/598) Row 4340687 (NC_000004.11:39507524::A 28/598)	-	Jul 13, 2019 (153)
63	Northern Sweden Submission ignored due to conflicting rows: Row 4340685 (NC_000004.11:39507524::AA 25/598) Row 4340686 (NC_000004.11:39507524:A: 90/598) Row 4340687 (NC_000004.11:39507524::A 28/598)	-	Jul 13, 2019 (153)
64	Northern Sweden Submission ignored due to conflicting rows: Row 4340685 (NC_000004.11:39507524::AA 25/598) Row 4340686 (NC_000004.11:39507524:A: 90/598) Row 4340687 (NC_000004.11:39507524::A 28/598)	-	Jul 13, 2019 (153)
65	8.3KJPN Submission ignored due to conflicting rows: Row 23131618 (NC_000004.11:39507524:A: 4196/16756) Row 23131619 (NC_000004.11:39507524::A 4173/16756) Row 23131620 (NC_000004.11:39507524::AA 3097/16756)...	-	Apr 26, 2021 (155)
66	8.3KJPN Submission ignored due to conflicting rows: Row 23131618 (NC_000004.11:39507524:A: 4196/16756) Row 23131619 (NC_000004.11:39507524::A 4173/16756) Row 23131620 (NC_000004.11:39507524::AA 3097/16756)...	-	Apr 26, 2021 (155)
67	8.3KJPN Submission ignored due to conflicting rows: Row 23131618 (NC_000004.11:39507524:A: 4196/16756) Row 23131619 (NC_000004.11:39507524::A 4173/16756) Row 23131620 (NC_000004.11:39507524::AA 3097/16756)...	-	Apr 26, 2021 (155)
68	8.3KJPN Submission ignored due to conflicting rows: Row 23131618 (NC_000004.11:39507524:A: 4196/16756) Row 23131619 (NC_000004.11:39507524::A 4173/16756) Row 23131620 (NC_000004.11:39507524::AA 3097/16756)...	-	Apr 26, 2021 (155)
69	14KJPN Submission ignored due to conflicting rows: Row 32910330 (NC_000004.12:39505904:A: 7081/28258) Row 32910331 (NC_000004.12:39505904::AA 5202/28258) Row 32910332 (NC_000004.12:39505904::A 7056/28258)...	-	Oct 13, 2022 (156)
70	14KJPN Submission ignored due to conflicting rows: Row 32910330 (NC_000004.12:39505904:A: 7081/28258) Row 32910331 (NC_000004.12:39505904::AA 5202/28258) Row 32910332 (NC_000004.12:39505904::A 7056/28258)...	-	Oct 13, 2022 (156)
71	14KJPN Submission ignored due to conflicting rows: Row 32910330 (NC_000004.12:39505904:A: 7081/28258) Row 32910331 (NC_000004.12:39505904::AA 5202/28258) Row 32910332 (NC_000004.12:39505904::A 7056/28258)...	-	Oct 13, 2022 (156)
72	14KJPN Submission ignored due to conflicting rows: Row 32910330 (NC_000004.12:39505904:A: 7081/28258) Row 32910331 (NC_000004.12:39505904::AA 5202/28258) Row 32910332 (NC_000004.12:39505904::A 7056/28258)...	-	Oct 13, 2022 (156)
73	ALFA	NC_000004.12 - 39505905	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs202224781	Apr 25, 2013 (138)
rs34368094	May 23, 2006 (127)
rs74272802	Jul 30, 2012 (137)
rs200222253	May 11, 2012 (137)
rs373772215	May 13, 2013 (138)
rs869254941	Jul 19, 2016 (147)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4094262664	NC_000004.12:39505904:AAA:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
719335234	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss103687498	NT_016297.16:6666898:AAA:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3984281653	NC_000004.11:39507524:AA:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3711839906, ss3953926998, ss4094262663, ss5258807184	NC_000004.12:39505904:AA:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
719335234	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss288510456	NC_000004.10:39183919:A:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss666253640, ss2994491602, ss3731055821, ss5165162311, ss5624138541	NC_000004.11:39507524:A:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3064963362, ss3647702010, ss4094262662, ss5258807180, ss5457632664, ss5699073226	NC_000004.12:39505904:A:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
719335234	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3711839905, ss3953926999	NC_000004.12:39505905:A:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss15165761	NT_016297.16:6666886:A:	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss288510458	NC_000004.10:39183934::A	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3731055822, ss3828485745, ss5165162312	NC_000004.11:39507524::A	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss1997168348	NC_000004.11:39507525::A	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss4094262658, ss5258807183, ss5457632666, ss5699073228	NC_000004.12:39505904::A	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
719335234	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3711839904, ss3953926996	NC_000004.12:39505906::A	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss288510458	NC_000004.10:39183934::AA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss663507903, ss3731055820, ss5165162313, ss5843849000	NC_000004.11:39507524::AA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3837679311	NC_000004.11:39507525::AA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss4094262659, ss5258807181, ss5457632665, ss5699073227, ss5863023033	NC_000004.12:39505904::AA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
719335234	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3843114355	NC_000004.12:39505905::AA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3711839903, ss3953926997	NC_000004.12:39505906::AA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss5165162314	NC_000004.11:39507524::AAA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss4094262660, ss5258807182, ss5457632667, ss5699073229	NC_000004.12:39505904::AAA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
719335234	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	NC_000004.12:39505904:AAAAAAAAAAAA… NC_000004.12:39505904:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11290546

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11290546