Name: rs11314559
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11314559

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:159788106-159788118 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delAAA / delAA / delA / dupA / dup…
delAAA / delAA / delA / dupA / dupAA / dupAAA
Variation Type: Indel Insertion and Deletion
Frequency: delA=0.2587 (1732/6695, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: CD302 : Intron Variant
LY75-CD302 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	6695	AAAAAAAAAAAAA=0.6600	AAAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.2587, AAAAAAAAAAAAAA=0.0813, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000	0.590399	0.128241	0.281359	32
European	Sub	5535	AAAAAAAAAAAAA=0.5893	AAAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.3124, AAAAAAAAAAAAAA=0.0983, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000	0.487247	0.16095	0.351803	32
African	Sub	920	AAAAAAAAAAAAA=1.000	AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
African Others	Sub	38	AAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African American	Sub	882	AAAAAAAAAAAAA=1.000	AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
Asian	Sub	34	AAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	28	AAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	6	AAAAAAAAAAAAA=1.0	AAAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	30	AAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	48	AAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	36	AAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Other	Sub	92	AAAAAAAAAAAAA=0.97	AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.03, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	0.934783	0.0	0.065217	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	6695	(A)₁₃=0.6600	delAA=0.0000, delA=0.2587, dupA=0.0813, dupAA=0.0000, dupAAA=0.0000
Allele Frequency Aggregator	European	Sub	5535	(A)₁₃=0.5893	delAA=0.0000, delA=0.3124, dupA=0.0983, dupAA=0.0000, dupAAA=0.0000
Allele Frequency Aggregator	African	Sub	920	(A)₁₃=1.000	delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000
Allele Frequency Aggregator	Other	Sub	92	(A)₁₃=0.97	delAA=0.00, delA=0.03, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator	Latin American 2	Sub	48	(A)₁₃=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator	South Asian	Sub	36	(A)₁₃=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator	Asian	Sub	34	(A)₁₃=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00
Allele Frequency Aggregator	Latin American 1	Sub	30	(A)₁₃=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.159788116_159788118del
GRCh38.p14 chr 2	NC_000002.12:g.159788117_159788118del
GRCh38.p14 chr 2	NC_000002.12:g.159788118del
GRCh38.p14 chr 2	NC_000002.12:g.159788118dup
GRCh38.p14 chr 2	NC_000002.12:g.159788117_159788118dup
GRCh38.p14 chr 2	NC_000002.12:g.159788116_159788118dup
GRCh37.p13 chr 2	NC_000002.11:g.160644627_160644629del
GRCh37.p13 chr 2	NC_000002.11:g.160644628_160644629del
GRCh37.p13 chr 2	NC_000002.11:g.160644629del
GRCh37.p13 chr 2	NC_000002.11:g.160644629dup
GRCh37.p13 chr 2	NC_000002.11:g.160644628_160644629dup
GRCh37.p13 chr 2	NC_000002.11:g.160644627_160644629dup

Gene: LY75-CD302, LY75-CD302 readthrough (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LY75-CD302 transcript variant 1	NM_001198759.1:c.4991-463… NM_001198759.1:c.4991-4639_4991-4637del	N/A	Intron Variant
LY75-CD302 transcript variant 2	NM_001198760.1:c.4823-463… NM_001198760.1:c.4823-4639_4823-4637del	N/A	Intron Variant

Gene: CD302, CD302 molecule (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
CD302 transcript variant 2	NM_001198763.2:c.68-4639_… NM_001198763.2:c.68-4639_68-4637del	N/A	Intron Variant
CD302 transcript variant 3	NM_001198764.2:c.68-7110_… NM_001198764.2:c.68-7110_68-7108del	N/A	Intron Variant
CD302 transcript variant 1	NM_014880.5:c.68-4639_68-… NM_014880.5:c.68-4639_68-4637del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₃=	delAAA	delAA	delA	dupA	dupAA	dupAAA
GRCh38.p14 chr 2	NC_000002.12:g.159788106_159788118=	NC_000002.12:g.159788116_159788118del	NC_000002.12:g.159788117_159788118del	NC_000002.12:g.159788118del	NC_000002.12:g.159788118dup	NC_000002.12:g.159788117_159788118dup	NC_000002.12:g.159788116_159788118dup
GRCh37.p13 chr 2	NC_000002.11:g.160644617_160644629=	NC_000002.11:g.160644627_160644629del	NC_000002.11:g.160644628_160644629del	NC_000002.11:g.160644629del	NC_000002.11:g.160644629dup	NC_000002.11:g.160644628_160644629dup	NC_000002.11:g.160644627_160644629dup
LY75-CD302 transcript variant 1	NM_001198759.1:c.4991-4637=	NM_001198759.1:c.4991-4639_4991-4637del	NM_001198759.1:c.4991-4638_4991-4637del	NM_001198759.1:c.4991-4637del	NM_001198759.1:c.4991-4637dup	NM_001198759.1:c.4991-4638_4991-4637dup	NM_001198759.1:c.4991-4639_4991-4637dup
LY75-CD302 transcript variant 2	NM_001198760.1:c.4823-4637=	NM_001198760.1:c.4823-4639_4823-4637del	NM_001198760.1:c.4823-4638_4823-4637del	NM_001198760.1:c.4823-4637del	NM_001198760.1:c.4823-4637dup	NM_001198760.1:c.4823-4638_4823-4637dup	NM_001198760.1:c.4823-4639_4823-4637dup
CD302 transcript variant 2	NM_001198763.1:c.68-4637=	NM_001198763.1:c.68-4639_68-4637del	NM_001198763.1:c.68-4638_68-4637del	NM_001198763.1:c.68-4637del	NM_001198763.1:c.68-4637dup	NM_001198763.1:c.68-4638_68-4637dup	NM_001198763.1:c.68-4639_68-4637dup
CD302 transcript variant 2	NM_001198763.2:c.68-4637=	NM_001198763.2:c.68-4639_68-4637del	NM_001198763.2:c.68-4638_68-4637del	NM_001198763.2:c.68-4637del	NM_001198763.2:c.68-4637dup	NM_001198763.2:c.68-4638_68-4637dup	NM_001198763.2:c.68-4639_68-4637dup
CD302 transcript variant 3	NM_001198764.1:c.68-7108=	NM_001198764.1:c.68-7110_68-7108del	NM_001198764.1:c.68-7109_68-7108del	NM_001198764.1:c.68-7108del	NM_001198764.1:c.68-7108dup	NM_001198764.1:c.68-7109_68-7108dup	NM_001198764.1:c.68-7110_68-7108dup
CD302 transcript variant 3	NM_001198764.2:c.68-7108=	NM_001198764.2:c.68-7110_68-7108del	NM_001198764.2:c.68-7109_68-7108del	NM_001198764.2:c.68-7108del	NM_001198764.2:c.68-7108dup	NM_001198764.2:c.68-7109_68-7108dup	NM_001198764.2:c.68-7110_68-7108dup
CD302 transcript variant 1	NM_014880.4:c.68-4637=	NM_014880.4:c.68-4639_68-4637del	NM_014880.4:c.68-4638_68-4637del	NM_014880.4:c.68-4637del	NM_014880.4:c.68-4637dup	NM_014880.4:c.68-4638_68-4637dup	NM_014880.4:c.68-4639_68-4637dup
CD302 transcript variant 1	NM_014880.5:c.68-4637=	NM_014880.5:c.68-4639_68-4637del	NM_014880.5:c.68-4638_68-4637del	NM_014880.5:c.68-4637del	NM_014880.5:c.68-4637dup	NM_014880.5:c.68-4638_68-4637dup	NM_014880.5:c.68-4639_68-4637dup
CD302 transcript variant X1	XM_005246982.1:c.11-4637=	XM_005246982.1:c.11-4639_11-4637del	XM_005246982.1:c.11-4638_11-4637del	XM_005246982.1:c.11-4637del	XM_005246982.1:c.11-4637dup	XM_005246982.1:c.11-4638_11-4637dup	XM_005246982.1:c.11-4639_11-4637dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

44 SubSNP, 15 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss79813672	Sep 08, 2015 (146)
2	HUMANGENOME_JCVI	ss96731743	Feb 13, 2009 (130)
3	GMI	ss288243586	May 04, 2012 (137)
4	PJP	ss295010904	May 09, 2011 (137)
5	SSMP	ss663252048	Apr 01, 2015 (144)
6	BILGI_BIOE	ss666172661	Apr 25, 2013 (138)
7	HAMMER_LAB	ss1797802326	Sep 08, 2015 (146)
8	SWEGEN	ss2990738988	Nov 08, 2017 (151)
9	MCHAISSO	ss3064817436	Nov 08, 2017 (151)
10	MCHAISSO	ss3065775020	Nov 08, 2017 (151)
11	BEROUKHIMLAB	ss3644105375	Oct 11, 2018 (152)
12	EVA_DECODE	ss3705269341	Jul 13, 2019 (153)
13	EVA_DECODE	ss3705269342	Jul 13, 2019 (153)
14	EVA_DECODE	ss3705269343	Jul 13, 2019 (153)
15	ACPOP	ss3729038710	Jul 13, 2019 (153)
16	ACPOP	ss3729038711	Jul 13, 2019 (153)
17	PACBIO	ss3784045983	Jul 13, 2019 (153)
18	PACBIO	ss3789601382	Jul 13, 2019 (153)
19	PACBIO	ss3794474362	Jul 13, 2019 (153)
20	EVA	ss3827316865	Apr 25, 2020 (154)
21	EVA	ss3837075134	Apr 25, 2020 (154)
22	EVA	ss3842494635	Apr 25, 2020 (154)
23	KOGIC	ss3949347124	Apr 25, 2020 (154)
24	KOGIC	ss3949347125	Apr 25, 2020 (154)
25	GNOMAD	ss4054224212	Apr 26, 2021 (155)
26	GNOMAD	ss4054224213	Apr 26, 2021 (155)
27	GNOMAD	ss4054224214	Apr 26, 2021 (155)
28	GNOMAD	ss4054224215	Apr 26, 2021 (155)
29	GNOMAD	ss4054224216	Apr 26, 2021 (155)
30	GNOMAD	ss4054224217	Apr 26, 2021 (155)
31	TOMMO_GENOMICS	ss5154759758	Apr 26, 2021 (155)
32	TOMMO_GENOMICS	ss5154759759	Apr 26, 2021 (155)
33	1000G_HIGH_COVERAGE	ss5250695521	Oct 13, 2022 (156)
34	1000G_HIGH_COVERAGE	ss5250695522	Oct 13, 2022 (156)
35	HUGCELL_USP	ss5450438688	Oct 13, 2022 (156)
36	HUGCELL_USP	ss5450438689	Oct 13, 2022 (156)
37	HUGCELL_USP	ss5450438690	Oct 13, 2022 (156)
38	TOMMO_GENOMICS	ss5685140748	Oct 13, 2022 (156)
39	TOMMO_GENOMICS	ss5685140749	Oct 13, 2022 (156)
40	EVA	ss5821071591	Oct 13, 2022 (156)
41	EVA	ss5821071592	Oct 13, 2022 (156)
42	EVA	ss5852797687	Oct 13, 2022 (156)
43	EVA	ss5933163163	Oct 13, 2022 (156)
44	EVA	ss5980091869	Oct 13, 2022 (156)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 79546668 (NC_000002.12:159788105::A 13315/126940) Row 79546669 (NC_000002.12:159788105::AA 16/127092) Row 79546670 (NC_000002.12:159788105::AAA 1/127100)...	-	Apr 26, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 79546668 (NC_000002.12:159788105::A 13315/126940) Row 79546669 (NC_000002.12:159788105::AA 16/127092) Row 79546670 (NC_000002.12:159788105::AAA 1/127100)...	-	Apr 26, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 79546668 (NC_000002.12:159788105::A 13315/126940) Row 79546669 (NC_000002.12:159788105::AA 16/127092) Row 79546670 (NC_000002.12:159788105::AAA 1/127100)...	-	Apr 26, 2021 (155)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 79546668 (NC_000002.12:159788105::A 13315/126940) Row 79546669 (NC_000002.12:159788105::AA 16/127092) Row 79546670 (NC_000002.12:159788105::AAA 1/127100)...	-	Apr 26, 2021 (155)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 79546668 (NC_000002.12:159788105::A 13315/126940) Row 79546669 (NC_000002.12:159788105::AA 16/127092) Row 79546670 (NC_000002.12:159788105::AAA 1/127100)...	-	Apr 26, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 79546668 (NC_000002.12:159788105::A 13315/126940) Row 79546669 (NC_000002.12:159788105::AA 16/127092) Row 79546670 (NC_000002.12:159788105::AAA 1/127100)...	-	Apr 26, 2021 (155)
51	Korean Genome Project Submission ignored due to conflicting rows: Row 5725125 (NC_000002.12:159788105:A: 810/1832) Row 5725126 (NC_000002.12:159788106::A 27/1832)	-	Apr 25, 2020 (154)
52	Korean Genome Project Submission ignored due to conflicting rows: Row 5725125 (NC_000002.12:159788105:A: 810/1832) Row 5725126 (NC_000002.12:159788106::A 27/1832)	-	Apr 25, 2020 (154)
53	Northern Sweden Submission ignored due to conflicting rows: Row 2323575 (NC_000002.11:160644616:A: 241/584) Row 2323576 (NC_000002.11:160644616::A 72/584)	-	Jul 13, 2019 (153)
54	Northern Sweden Submission ignored due to conflicting rows: Row 2323575 (NC_000002.11:160644616:A: 241/584) Row 2323576 (NC_000002.11:160644616::A 72/584)	-	Jul 13, 2019 (153)
55	8.3KJPN Submission ignored due to conflicting rows: Row 12729065 (NC_000002.11:160644616:A: 8263/16760) Row 12729066 (NC_000002.11:160644616::A 23/16760)	-	Apr 26, 2021 (155)
56	8.3KJPN Submission ignored due to conflicting rows: Row 12729065 (NC_000002.11:160644616:A: 8263/16760) Row 12729066 (NC_000002.11:160644616::A 23/16760)	-	Apr 26, 2021 (155)
57	14KJPN Submission ignored due to conflicting rows: Row 18977852 (NC_000002.12:159788105:A: 13799/28256) Row 18977853 (NC_000002.12:159788105::A 37/28256)	-	Oct 13, 2022 (156)
58	14KJPN Submission ignored due to conflicting rows: Row 18977852 (NC_000002.12:159788105:A: 13799/28256) Row 18977853 (NC_000002.12:159788105::A 37/28256)	-	Oct 13, 2022 (156)
59	ALFA	NC_000002.12 - 159788106	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs36120677	May 11, 2012 (137)
rs57144754	May 11, 2012 (137)
rs199659148	May 11, 2012 (137)
rs369992397	May 13, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5980091869	NC_000002.11:160644616:AAA:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAA
ss4054224217	NC_000002.12:159788105:AAA:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAA	(self)
ss3705269343, ss4054224216, ss5450438690	NC_000002.12:159788105:AA:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAA	(self)
1578878018	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAA	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss79813672	NC_000002.9:160470135:A:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss288243586	NC_000002.10:160352862:A:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss295010904	NC_000002.10:160352874:A:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss663252048, ss666172661, ss1797802326, ss2990738988, ss3644105375, ss3729038710, ss3827316865, ss3837075134, ss5154759758, ss5821071591	NC_000002.11:160644616:A:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3064817436, ss3065775020, ss3842494635, ss3949347124, ss4054224215, ss5250695521, ss5450438688, ss5685140748, ss5852797687, ss5933163163	NC_000002.12:159788105:A:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
1578878018	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAA	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3705269342	NC_000002.12:159788106:A:	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3729038711, ss3784045983, ss3789601382, ss3794474362, ss5154759759, ss5821071592	NC_000002.11:160644616::A	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss4054224212, ss5250695522, ss5450438689, ss5685140749	NC_000002.12:159788105::A	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
1578878018	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3949347125	NC_000002.12:159788106::A	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3705269341	NC_000002.12:159788107::A	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss96731743	NT_005403.17:10854034::A	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss4054224213	NC_000002.12:159788105::AA	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
1578878018	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss4054224214	NC_000002.12:159788105::AAA	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
1578878018	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000002.12:159788105:AAAAAAAAAAA… NC_000002.12:159788105:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11314559

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11314559