Name: rs11331051
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11331051

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:160116542-160116551 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delCC / delC / dupC / dupCC / dupC…
delCC / delC / dupC / dupCC / dupCCC
Variation Type: Indel Insertion and Deletion
Frequency: dupC=0.078428 (20759/264690, TOPMED)
(C)₁₀=0.3685 (2585/7014, ALFA)
(C)₁₀=0.0021 (8/3854, ALSPAC) (+ 1 more)
(C)₁₀=0.0003 (1/3708, TWINSUK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ATP1A2 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	7014	CCCCCCCCCC=0.3685	CCCCCCCC=0.0000, CCCCCCCCC=0.5224, CCCCCCCCCCC=0.1084, CCCCCCCCCCCC=0.0007, CCCCCCCCCCCCC=0.0000	0.454481	0.533024	0.012496	32
European	Sub	5464	CCCCCCCCCC=0.1909	CCCCCCCC=0.0000, CCCCCCCCC=0.6697, CCCCCCCCCCC=0.1385, CCCCCCCCCCCC=0.0009, CCCCCCCCCCCCC=0.0000	0.247413	0.735338	0.01725	32
African	Sub	1206	CCCCCCCCCC=1.0000	CCCCCCCC=0.0000, CCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCC=0.0000, CCCCCCCCCCCCC=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	32	CCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
African American	Sub	1174	CCCCCCCCCC=1.0000	CCCCCCCC=0.0000, CCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCC=0.0000, CCCCCCCCCCCCC=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	18	CCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	12	CCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	6	CCCCCCCCCC=1.0	CCCCCCCC=0.0, CCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	42	CCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	160	CCCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	10	CCCCCCCCCC=1.0	CCCCCCCC=0.0, CCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Other	Sub	114	CCCCCCCCCC=0.930	CCCCCCCC=0.000, CCCCCCCCC=0.044, CCCCCCCCCCC=0.026, CCCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000	0.981481	0.018519	0.0	29

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	- No frequency provided	dupC=0.078428
Allele Frequency Aggregator	Total	Global	7014	(C)₁₀=0.3685	delCC=0.0000, delC=0.5224, dupC=0.1084, dupCC=0.0007, dupCCC=0.0000
Allele Frequency Aggregator	European	Sub	5464	(C)₁₀=0.1909	delCC=0.0000, delC=0.6697, dupC=0.1385, dupCC=0.0009, dupCCC=0.0000
Allele Frequency Aggregator	African	Sub	1206	(C)₁₀=1.0000	delCC=0.0000, delC=0.0000, dupC=0.0000, dupCC=0.0000, dupCCC=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	160	(C)₁₀=1.000	delCC=0.000, delC=0.000, dupC=0.000, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	Other	Sub	114	(C)₁₀=0.930	delCC=0.000, delC=0.044, dupC=0.026, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	Latin American 1	Sub	42	(C)₁₀=1.00	delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00, dupCCC=0.00
Allele Frequency Aggregator	Asian	Sub	18	(C)₁₀=1.00	delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00, dupCCC=0.00
Allele Frequency Aggregator	South Asian	Sub	10	(C)₁₀=1.0	delCC=0.0, delC=0.0, dupC=0.0, dupCC=0.0, dupCCC=0.0
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(C)₁₀=0.0021	delC=0.9979
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(C)₁₀=0.0003	delC=0.9997

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.160116550_160116551del
GRCh38.p14 chr 1	NC_000001.11:g.160116551del
GRCh38.p14 chr 1	NC_000001.11:g.160116551dup
GRCh38.p14 chr 1	NC_000001.11:g.160116550_160116551dup
GRCh38.p14 chr 1	NC_000001.11:g.160116549_160116551dup
GRCh37.p13 chr 1	NC_000001.10:g.160086340_160086341del
GRCh37.p13 chr 1	NC_000001.10:g.160086341del
GRCh37.p13 chr 1	NC_000001.10:g.160086341dup
GRCh37.p13 chr 1	NC_000001.10:g.160086340_160086341dup
GRCh37.p13 chr 1	NC_000001.10:g.160086339_160086341dup
ATP1A2 RefSeqGene (LRG_6)	NG_008014.1:g.5793_5794del
ATP1A2 RefSeqGene (LRG_6)	NG_008014.1:g.5794del
ATP1A2 RefSeqGene (LRG_6)	NG_008014.1:g.5794dup
ATP1A2 RefSeqGene (LRG_6)	NG_008014.1:g.5793_5794dup
ATP1A2 RefSeqGene (LRG_6)	NG_008014.1:g.5792_5794dup

Gene: ATP1A2, ATPase Na+/K+ transporting subunit alpha 2 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ATP1A2 transcript	NM_000702.4:c.12+677_12+6… NM_000702.4:c.12+677_12+678del	N/A	Intron Variant
ATP1A2 transcript variant X1	XM_047421286.1:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(C)₁₀=	delCC	delC	dupC	dupCC	dupCCC
GRCh38.p14 chr 1	NC_000001.11:g.160116542_160116551=	NC_000001.11:g.160116550_160116551del	NC_000001.11:g.160116551del	NC_000001.11:g.160116551dup	NC_000001.11:g.160116550_160116551dup	NC_000001.11:g.160116549_160116551dup
GRCh37.p13 chr 1	NC_000001.10:g.160086332_160086341=	NC_000001.10:g.160086340_160086341del	NC_000001.10:g.160086341del	NC_000001.10:g.160086341dup	NC_000001.10:g.160086340_160086341dup	NC_000001.10:g.160086339_160086341dup
ATP1A2 RefSeqGene (LRG_6)	NG_008014.1:g.5785_5794=	NG_008014.1:g.5793_5794del	NG_008014.1:g.5794del	NG_008014.1:g.5794dup	NG_008014.1:g.5793_5794dup	NG_008014.1:g.5792_5794dup
ATP1A2 transcript	NM_000702.3:c.12+669=	NM_000702.3:c.12+677_12+678del	NM_000702.3:c.12+678del	NM_000702.3:c.12+678dup	NM_000702.3:c.12+677_12+678dup	NM_000702.3:c.12+676_12+678dup
ATP1A2 transcript	NM_000702.4:c.12+669=	NM_000702.4:c.12+677_12+678del	NM_000702.4:c.12+678del	NM_000702.4:c.12+678dup	NM_000702.4:c.12+677_12+678dup	NM_000702.4:c.12+676_12+678dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

57 SubSNP, 17 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss77902814	Dec 06, 2007 (129)
2	HGSV	ss82580926	Sep 08, 2015 (146)
3	HGSV	ss82718682	Sep 08, 2015 (146)
4	HGSV	ss82764759	Sep 08, 2015 (146)
5	HUMANGENOME_JCVI	ss95244418	Feb 13, 2009 (137)
6	GMI	ss288045498	May 04, 2012 (137)
7	PJP	ss294606572	May 09, 2011 (134)
8	1000GENOMES	ss326090508	May 09, 2011 (137)
9	1000GENOMES	ss326093630	May 09, 2011 (137)
10	LUNTER	ss550985050	Apr 25, 2013 (138)
11	LUNTER	ss551003473	Apr 25, 2013 (138)
12	LUNTER	ss552810609	Apr 25, 2013 (138)
13	TISHKOFF	ss553782304	Apr 25, 2013 (138)
14	TISHKOFF	ss553782306	Apr 25, 2013 (138)
15	BILGI_BIOE	ss666112772	Apr 25, 2013 (138)
16	SSIP	ss947031748	Aug 21, 2014 (142)
17	EVA_UK10K_ALSPAC	ss1701299204	Apr 01, 2015 (144)
18	EVA_UK10K_TWINSUK	ss1701299797	Apr 01, 2015 (144)
19	HAMMER_LAB	ss1795142740	Sep 08, 2015 (146)
20	SWEGEN	ss2987815092	Jan 10, 2018 (151)
21	BEROUKHIMLAB	ss3644070218	Oct 11, 2018 (152)
22	EVA_DECODE	ss3687858407	Jul 12, 2019 (153)
23	EVA_DECODE	ss3687858408	Jul 12, 2019 (153)
24	EVA_DECODE	ss3687858409	Jul 12, 2019 (153)
25	EVA_DECODE	ss3687858410	Jul 12, 2019 (153)
26	ACPOP	ss3727517989	Jul 12, 2019 (153)
27	ACPOP	ss3727517990	Jul 12, 2019 (153)
28	PACBIO	ss3783577242	Jul 12, 2019 (153)
29	PACBIO	ss3783577243	Jul 12, 2019 (153)
30	PACBIO	ss3789206847	Jul 12, 2019 (153)
31	PACBIO	ss3789206848	Jul 12, 2019 (153)
32	PACBIO	ss3794078859	Jul 12, 2019 (153)
33	PACBIO	ss3794078860	Jul 12, 2019 (153)
34	EVA	ss3826444501	Apr 25, 2020 (154)
35	EVA	ss3836617071	Apr 25, 2020 (154)
36	GNOMAD	ss4004413998	Apr 25, 2021 (155)
37	GNOMAD	ss4004413999	Apr 25, 2021 (155)
38	GNOMAD	ss4004414000	Apr 25, 2021 (155)
39	GNOMAD	ss4004414002	Apr 25, 2021 (155)
40	GNOMAD	ss4004414003	Apr 25, 2021 (155)
41	TOPMED	ss4469686168	Apr 25, 2021 (155)
42	TOMMO_GENOMICS	ss5146661057	Apr 25, 2021 (155)
43	TOMMO_GENOMICS	ss5146661058	Apr 25, 2021 (155)
44	TOMMO_GENOMICS	ss5146661059	Apr 25, 2021 (155)
45	1000G_HIGH_COVERAGE	ss5244425843	Oct 12, 2022 (156)
46	1000G_HIGH_COVERAGE	ss5244425844	Oct 12, 2022 (156)
47	1000G_HIGH_COVERAGE	ss5244425845	Oct 12, 2022 (156)
48	1000G_HIGH_COVERAGE	ss5244425846	Oct 12, 2022 (156)
49	HUGCELL_USP	ss5445001979	Oct 12, 2022 (156)
50	HUGCELL_USP	ss5445001980	Oct 12, 2022 (156)
51	TOMMO_GENOMICS	ss5673912192	Oct 12, 2022 (156)
52	TOMMO_GENOMICS	ss5673912193	Oct 12, 2022 (156)
53	TOMMO_GENOMICS	ss5673912194	Oct 12, 2022 (156)
54	EVA	ss5832718033	Oct 12, 2022 (156)
55	EVA	ss5849123263	Oct 12, 2022 (156)
56	EVA	ss5910397765	Oct 12, 2022 (156)
57	EVA	ss5938463227	Oct 12, 2022 (156)
58	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 160086332	Oct 11, 2018 (152)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 28186004 (NC_000001.11:160116541::C 11423/137230) Row 28186005 (NC_000001.11:160116541::CC 204/137534) Row 28186006 (NC_000001.11:160116541::CCC 1/137548)...	-	Apr 25, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 28186004 (NC_000001.11:160116541::C 11423/137230) Row 28186005 (NC_000001.11:160116541::CC 204/137534) Row 28186006 (NC_000001.11:160116541::CCC 1/137548)...	-	Apr 25, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 28186004 (NC_000001.11:160116541::C 11423/137230) Row 28186005 (NC_000001.11:160116541::CC 204/137534) Row 28186006 (NC_000001.11:160116541::CCC 1/137548)...	-	Apr 25, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 28186004 (NC_000001.11:160116541::C 11423/137230) Row 28186005 (NC_000001.11:160116541::CC 204/137534) Row 28186006 (NC_000001.11:160116541::CCC 1/137548)...	-	Apr 25, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 28186004 (NC_000001.11:160116541::C 11423/137230) Row 28186005 (NC_000001.11:160116541::CC 204/137534) Row 28186006 (NC_000001.11:160116541::CCC 1/137548)...	-	Apr 25, 2021 (155)
64	Northern Sweden Submission ignored due to conflicting rows: Row 802854 (NC_000001.10:160086331:C: 521/600) Row 802855 (NC_000001.10:160086331::C 72/600)	-	Jul 12, 2019 (153)
65	Northern Sweden Submission ignored due to conflicting rows: Row 802854 (NC_000001.10:160086331:C: 521/600) Row 802855 (NC_000001.10:160086331::C 72/600)	-	Jul 12, 2019 (153)
66	8.3KJPN Submission ignored due to conflicting rows: Row 4630364 (NC_000001.10:160086331:C: 16014/16758) Row 4630365 (NC_000001.10:160086331::C 612/16758) Row 4630366 (NC_000001.10:160086331:CC: 8/16758)	-	Apr 25, 2021 (155)
67	8.3KJPN Submission ignored due to conflicting rows: Row 4630364 (NC_000001.10:160086331:C: 16014/16758) Row 4630365 (NC_000001.10:160086331::C 612/16758) Row 4630366 (NC_000001.10:160086331:CC: 8/16758)	-	Apr 25, 2021 (155)
68	8.3KJPN Submission ignored due to conflicting rows: Row 4630364 (NC_000001.10:160086331:C: 16014/16758) Row 4630365 (NC_000001.10:160086331::C 612/16758) Row 4630366 (NC_000001.10:160086331:CC: 8/16758)	-	Apr 25, 2021 (155)
69	14KJPN Submission ignored due to conflicting rows: Row 7749296 (NC_000001.11:160116541:C: 27099/28256) Row 7749297 (NC_000001.11:160116541::C 967/28256) Row 7749298 (NC_000001.11:160116541::CC 3/28256)	-	Oct 12, 2022 (156)
70	14KJPN Submission ignored due to conflicting rows: Row 7749296 (NC_000001.11:160116541:C: 27099/28256) Row 7749297 (NC_000001.11:160116541::C 967/28256) Row 7749298 (NC_000001.11:160116541::CC 3/28256)	-	Oct 12, 2022 (156)
71	14KJPN Submission ignored due to conflicting rows: Row 7749296 (NC_000001.11:160116541:C: 27099/28256) Row 7749297 (NC_000001.11:160116541::C 967/28256) Row 7749298 (NC_000001.11:160116541::CC 3/28256)	-	Oct 12, 2022 (156)
72	TopMed	NC_000001.11 - 160116542	Apr 25, 2021 (155)
73	UK 10K study - Twins	NC_000001.10 - 160086332	Oct 11, 2018 (152)
74	ALFA	NC_000001.11 - 160116542	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs59534551	May 25, 2008 (130)
rs71090303	May 11, 2012 (137)
rs145186251	May 11, 2012 (137)
rs369112630	May 15, 2013 (138)
rs371226046	May 13, 2013 (138)
rs377319348	May 15, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss2987815092, ss5146661059	NC_000001.10:160086331:CC:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCC	(self)
ss3687858410, ss4004414003, ss5244425845	NC_000001.11:160116541:CC:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCC	(self)
9623412825	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCC	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCC	(self)
ss82580926, ss82718682, ss82764759	NC_000001.8:156899413:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
ss288045498, ss326090508, ss326093630, ss550985050, ss551003473, ss552810609	NC_000001.9:158352955:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
ss294606572	NC_000001.9:158352964:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
2110642, 2110642, ss666112772, ss1701299204, ss1701299797, ss1795142740, ss3644070218, ss3727517989, ss3783577242, ss3789206847, ss3794078859, ss3836617071, ss5146661057, ss5832718033, ss5938463227	NC_000001.10:160086331:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
ss553782304, ss947031748	NC_000001.10:160086332:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
ss553782306	NC_000001.10:160086340:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
ss4004414002, ss5244425843, ss5445001979, ss5673912192, ss5849123263, ss5910397765	NC_000001.11:160116541:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
9623412825	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
ss3687858409	NC_000001.11:160116542:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
ss95244418	NT_004487.19:11574981:C:	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCC	(self)
ss3727517990, ss3783577243, ss3789206848, ss3794078860, ss3826444501, ss5146661058	NC_000001.10:160086331::C	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCC	(self)
33292503, ss4004413998, ss4469686168, ss5244425844, ss5445001980, ss5673912193	NC_000001.11:160116541::C	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCC	(self)
9623412825	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCC	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCC	(self)
ss3687858408	NC_000001.11:160116543::C	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCC	(self)
ss77902814	NT_004487.19:11574983::C	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCC	(self)
ss4004413999, ss5244425846, ss5673912194	NC_000001.11:160116541::CC	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCCC	(self)
9623412825	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCCC	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCCC	(self)
ss3687858407	NC_000001.11:160116543::CC	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCCC	(self)
ss4004414000	NC_000001.11:160116541::CCC	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCCCC	(self)
9623412825	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCCCC	NC_000001.11:160116541:CCCCCCCCCC:… NC_000001.11:160116541:CCCCCCCCCC:CCCCCCCCCCCCC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11331051

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11331051