Name: rs11340677
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11340677

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr4:82662858-82662876 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₈ / del(A)₄ / delAAA / delAA…
del(A)₈ / del(A)₄ / delAAA / delAA / delA / dupA / dupAA / dupAAA / dup(A)₅ / dup(A)₆ / dup(A)₁₆ / dup(A)₁₉
Variation Type: Indel Insertion and Deletion
Frequency: del(A)₈=0.0000 (0/8056, ALFA)
delAA=0.0000 (0/8056, ALFA)
delA=0.0000 (0/8056, ALFA) (+ 2 more)
dupA=0.0000 (0/8056, ALFA)
dupAA=0.0000 (0/8056, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SCD5 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	8056	AAAAAAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
European	Sub	5140	AAAAAAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African	Sub	1922	AAAAAAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African Others	Sub	68	AAAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
African American	Sub	1854	AAAAAAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
Asian	Sub	40	AAAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
East Asian	Sub	32	AAAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other Asian	Sub	8	AAAAAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAA=0.0	1.0	N/A
Latin American 1	Sub	96	AAAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Latin American 2	Sub	454	AAAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
South Asian	Sub	70	AAAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other	Sub	334	AAAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	8056	(A)₁₉=1.0000	del(A)₈=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	European	Sub	5140	(A)₁₉=1.0000	del(A)₈=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	African	Sub	1922	(A)₁₉=1.0000	del(A)₈=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	454	(A)₁₉=1.000	del(A)₈=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	Other	Sub	334	(A)₁₉=1.000	del(A)₈=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	Latin American 1	Sub	96	(A)₁₉=1.00	del(A)₈=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	South Asian	Sub	70	(A)₁₉=1.00	del(A)₈=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Asian	Sub	40	(A)₁₉=1.00	del(A)₈=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 4	NC_000004.12:g.82662869_82662876del
GRCh38.p14 chr 4	NC_000004.12:g.82662873_82662876del
GRCh38.p14 chr 4	NC_000004.12:g.82662874_82662876del
GRCh38.p14 chr 4	NC_000004.12:g.82662875_82662876del
GRCh38.p14 chr 4	NC_000004.12:g.82662876del
GRCh38.p14 chr 4	NC_000004.12:g.82662876dup
GRCh38.p14 chr 4	NC_000004.12:g.82662875_82662876dup
GRCh38.p14 chr 4	NC_000004.12:g.82662874_82662876dup
GRCh38.p14 chr 4	NC_000004.12:g.82662872_82662876dup
GRCh38.p14 chr 4	NC_000004.12:g.82662871_82662876dup
GRCh38.p14 chr 4	NC_000004.12:g.82662861_82662876dup
GRCh38.p14 chr 4	NC_000004.12:g.82662858_82662876dup
GRCh37.p13 chr 4	NC_000004.11:g.83584022_83584029del
GRCh37.p13 chr 4	NC_000004.11:g.83584026_83584029del
GRCh37.p13 chr 4	NC_000004.11:g.83584027_83584029del
GRCh37.p13 chr 4	NC_000004.11:g.83584028_83584029del
GRCh37.p13 chr 4	NC_000004.11:g.83584029del
GRCh37.p13 chr 4	NC_000004.11:g.83584029dup
GRCh37.p13 chr 4	NC_000004.11:g.83584028_83584029dup
GRCh37.p13 chr 4	NC_000004.11:g.83584027_83584029dup
GRCh37.p13 chr 4	NC_000004.11:g.83584025_83584029dup
GRCh37.p13 chr 4	NC_000004.11:g.83584024_83584029dup
GRCh37.p13 chr 4	NC_000004.11:g.83584014_83584029dup
GRCh37.p13 chr 4	NC_000004.11:g.83584011_83584029dup

Gene: SCD5, stearoyl-CoA desaturase 5 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SCD5 transcript variant 1	NM_001037582.3:c.569+1784… NM_001037582.3:c.569+17842_569+17849del	N/A	Intron Variant
SCD5 transcript variant 2	NM_024906.3:c.570-1788_57… NM_024906.3:c.570-1788_570-1781del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₉=	del(A)₈	del(A)₄	delAAA	delAA	delA	dupA	dupAA	dupAAA	dup(A)₅	dup(A)₆	dup(A)₁₆	dup(A)₁₉
GRCh38.p14 chr 4	NC_000004.12:g.82662858_82662876=	NC_000004.12:g.82662869_82662876del	NC_000004.12:g.82662873_82662876del	NC_000004.12:g.82662874_82662876del	NC_000004.12:g.82662875_82662876del	NC_000004.12:g.82662876del	NC_000004.12:g.82662876dup	NC_000004.12:g.82662875_82662876dup	NC_000004.12:g.82662874_82662876dup	NC_000004.12:g.82662872_82662876dup	NC_000004.12:g.82662871_82662876dup	NC_000004.12:g.82662861_82662876dup	NC_000004.12:g.82662858_82662876dup
GRCh37.p13 chr 4	NC_000004.11:g.83584011_83584029=	NC_000004.11:g.83584022_83584029del	NC_000004.11:g.83584026_83584029del	NC_000004.11:g.83584027_83584029del	NC_000004.11:g.83584028_83584029del	NC_000004.11:g.83584029del	NC_000004.11:g.83584029dup	NC_000004.11:g.83584028_83584029dup	NC_000004.11:g.83584027_83584029dup	NC_000004.11:g.83584025_83584029dup	NC_000004.11:g.83584024_83584029dup	NC_000004.11:g.83584014_83584029dup	NC_000004.11:g.83584011_83584029dup
SCD5 transcript variant 1	NM_001037582.2:c.569+17849=	NM_001037582.2:c.569+17842_569+17849del	NM_001037582.2:c.569+17846_569+17849del	NM_001037582.2:c.569+17847_569+17849del	NM_001037582.2:c.569+17848_569+17849del	NM_001037582.2:c.569+17849del	NM_001037582.2:c.569+17849dup	NM_001037582.2:c.569+17848_569+17849dup	NM_001037582.2:c.569+17847_569+17849dup	NM_001037582.2:c.569+17845_569+17849dup	NM_001037582.2:c.569+17844_569+17849dup	NM_001037582.2:c.569+17834_569+17849dup	NM_001037582.2:c.569+17831_569+17849dup
SCD5 transcript variant 1	NM_001037582.3:c.569+17849=	NM_001037582.3:c.569+17842_569+17849del	NM_001037582.3:c.569+17846_569+17849del	NM_001037582.3:c.569+17847_569+17849del	NM_001037582.3:c.569+17848_569+17849del	NM_001037582.3:c.569+17849del	NM_001037582.3:c.569+17849dup	NM_001037582.3:c.569+17848_569+17849dup	NM_001037582.3:c.569+17847_569+17849dup	NM_001037582.3:c.569+17845_569+17849dup	NM_001037582.3:c.569+17844_569+17849dup	NM_001037582.3:c.569+17834_569+17849dup	NM_001037582.3:c.569+17831_569+17849dup
SCD5 transcript variant 2	NM_024906.2:c.570-1781=	NM_024906.2:c.570-1788_570-1781del	NM_024906.2:c.570-1784_570-1781del	NM_024906.2:c.570-1783_570-1781del	NM_024906.2:c.570-1782_570-1781del	NM_024906.2:c.570-1781del	NM_024906.2:c.570-1781dup	NM_024906.2:c.570-1782_570-1781dup	NM_024906.2:c.570-1783_570-1781dup	NM_024906.2:c.570-1785_570-1781dup	NM_024906.2:c.570-1786_570-1781dup	NM_024906.2:c.570-1796_570-1781dup	NM_024906.2:c.570-1799_570-1781dup
SCD5 transcript variant 2	NM_024906.3:c.570-1781=	NM_024906.3:c.570-1788_570-1781del	NM_024906.3:c.570-1784_570-1781del	NM_024906.3:c.570-1783_570-1781del	NM_024906.3:c.570-1782_570-1781del	NM_024906.3:c.570-1781del	NM_024906.3:c.570-1781dup	NM_024906.3:c.570-1782_570-1781dup	NM_024906.3:c.570-1783_570-1781dup	NM_024906.3:c.570-1785_570-1781dup	NM_024906.3:c.570-1786_570-1781dup	NM_024906.3:c.570-1796_570-1781dup	NM_024906.3:c.570-1799_570-1781dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

33 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42238547	Mar 13, 2006 (126)
2	HGSV	ss83314598	Dec 14, 2007 (129)
3	HUMANGENOME_JCVI	ss95360721	Dec 05, 2013 (138)
4	PJP	ss295174651	May 09, 2011 (134)
5	SSMP	ss663533377	Apr 01, 2015 (144)
6	PACBIO	ss3790220978	Jul 13, 2019 (153)
7	PACBIO	ss3795096329	Jul 13, 2019 (153)
8	EVA	ss3828643825	Apr 26, 2020 (154)
9	KOGIC	ss3954534130	Apr 26, 2020 (154)
10	KOGIC	ss3954534131	Apr 26, 2020 (154)
11	KOGIC	ss3954534132	Apr 26, 2020 (154)
12	GNOMAD	ss4114692147	Apr 26, 2021 (155)
13	GNOMAD	ss4114692148	Apr 26, 2021 (155)
14	GNOMAD	ss4114692149	Apr 26, 2021 (155)
15	GNOMAD	ss4114692150	Apr 26, 2021 (155)
16	GNOMAD	ss4114692151	Apr 26, 2021 (155)
17	GNOMAD	ss4114692152	Apr 26, 2021 (155)
18	GNOMAD	ss4114692153	Apr 26, 2021 (155)
19	GNOMAD	ss4114692155	Apr 26, 2021 (155)
20	GNOMAD	ss4114692156	Apr 26, 2021 (155)
21	GNOMAD	ss4114692157	Apr 26, 2021 (155)
22	TOMMO_GENOMICS	ss5166573044	Apr 26, 2021 (155)
23	TOMMO_GENOMICS	ss5166573045	Apr 26, 2021 (155)
24	TOMMO_GENOMICS	ss5166573046	Apr 26, 2021 (155)
25	1000G_HIGH_COVERAGE	ss5259883320	Oct 17, 2022 (156)
26	HUGCELL_USP	ss5458569450	Oct 17, 2022 (156)
27	HUGCELL_USP	ss5458569451	Oct 17, 2022 (156)
28	HUGCELL_USP	ss5458569452	Oct 17, 2022 (156)
29	HUGCELL_USP	ss5458569453	Oct 17, 2022 (156)
30	TOMMO_GENOMICS	ss5701159915	Oct 17, 2022 (156)
31	TOMMO_GENOMICS	ss5701159916	Oct 17, 2022 (156)
32	TOMMO_GENOMICS	ss5701159918	Oct 17, 2022 (156)
33	EVA	ss5864218327	Oct 17, 2022 (156)
34	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
35	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
36	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
37	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155438265 (NC_000004.12:82662857::A 1200/65748) Row 155438266 (NC_000004.12:82662857::AA 71/65666) Row 155438267 (NC_000004.12:82662857::AAA 2/66292)...	-	Apr 26, 2021 (155)
44	Korean Genome Project Submission ignored due to conflicting rows: Row 10912131 (NC_000004.12:82662858:A: 651/1736) Row 10912132 (NC_000004.12:82662857:AA: 64/1736) Row 10912133 (NC_000004.12:82662859::A 97/1736)	-	Apr 26, 2020 (154)
45	Korean Genome Project Submission ignored due to conflicting rows: Row 10912131 (NC_000004.12:82662858:A: 651/1736) Row 10912132 (NC_000004.12:82662857:AA: 64/1736) Row 10912133 (NC_000004.12:82662859::A 97/1736)	-	Apr 26, 2020 (154)
46	Korean Genome Project Submission ignored due to conflicting rows: Row 10912131 (NC_000004.12:82662858:A: 651/1736) Row 10912132 (NC_000004.12:82662857:AA: 64/1736) Row 10912133 (NC_000004.12:82662859::A 97/1736)	-	Apr 26, 2020 (154)
47	8.3KJPN Submission ignored due to conflicting rows: Row 24542351 (NC_000004.11:83584010:A: 3864/16680) Row 24542352 (NC_000004.11:83584010::A 121/16680) Row 24542353 (NC_000004.11:83584010:AA: 2/16680)	-	Apr 26, 2021 (155)
48	8.3KJPN Submission ignored due to conflicting rows: Row 24542351 (NC_000004.11:83584010:A: 3864/16680) Row 24542352 (NC_000004.11:83584010::A 121/16680) Row 24542353 (NC_000004.11:83584010:AA: 2/16680)	-	Apr 26, 2021 (155)
49	8.3KJPN Submission ignored due to conflicting rows: Row 24542351 (NC_000004.11:83584010:A: 3864/16680) Row 24542352 (NC_000004.11:83584010::A 121/16680) Row 24542353 (NC_000004.11:83584010:AA: 2/16680)	-	Apr 26, 2021 (155)
50	14KJPN Submission ignored due to conflicting rows: Row 34997019 (NC_000004.12:82662857:A: 8389/28238) Row 34997020 (NC_000004.12:82662857::A 248/28238) Row 34997022 (NC_000004.12:82662857:AA: 2/28238)	-	Oct 17, 2022 (156)
51	14KJPN Submission ignored due to conflicting rows: Row 34997019 (NC_000004.12:82662857:A: 8389/28238) Row 34997020 (NC_000004.12:82662857::A 248/28238) Row 34997022 (NC_000004.12:82662857:AA: 2/28238)	-	Oct 17, 2022 (156)
52	14KJPN Submission ignored due to conflicting rows: Row 34997019 (NC_000004.12:82662857:A: 8389/28238) Row 34997020 (NC_000004.12:82662857::A 248/28238) Row 34997022 (NC_000004.12:82662857:AA: 2/28238)	-	Oct 17, 2022 (156)
53	ALFA	NC_000004.12 - 82662858	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs34692609	May 23, 2006 (127)
rs70964799	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
13411926446	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss4114692157	NC_000004.12:82662857:AAAA:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss83314598	NC_000004.9:83941205:AAA:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss5166573046	NC_000004.11:83584010:AA:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3954534131, ss4114692156, ss5458569450, ss5701159918, ss5864218327	NC_000004.12:82662857:AA:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
13411926446	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss295174651	NC_000004.10:83803034:A:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss3790220978, ss3795096329, ss5166573044	NC_000004.11:83584010:A:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss4114692155, ss5259883320, ss5458569451, ss5701159915	NC_000004.12:82662857:A:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
13411926446	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss3954534130	NC_000004.12:82662858:A:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss42238547	NT_016354.19:8131731:A:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss95360721	NT_016354.19:8131749:A:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss663533377, ss3828643825, ss5166573045	NC_000004.11:83584010::A	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4114692147, ss5458569452, ss5701159916	NC_000004.12:82662857::A	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
13411926446	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss3954534132	NC_000004.12:82662859::A	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4114692148, ss5458569453	NC_000004.12:82662857::AA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA	(self)
13411926446	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA	(self)
ss4114692149	NC_000004.12:82662857::AAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA	(self)
ss4114692150	NC_000004.12:82662857::AAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4114692151	NC_000004.12:82662857::AAAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4114692152	NC_000004.12:82662857::AAAAAAAAAAA… NC_000004.12:82662857::AAAAAAAAAAAAAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4114692153	NC_000004.12:82662857::AAAAAAAAAAA… NC_000004.12:82662857::AAAAAAAAAAAAAAAAAAA	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3434193455	NC_000004.12:82662857:AAAAAAAA:	NC_000004.12:82662857:AAAAAAAAAAAA… NC_000004.12:82662857:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11340677

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11340677