Name: rs11370658
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11370658

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:8449462-8449479 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₉ / del(T)₆ / del(T)₅ / del(…
del(T)₉ / del(T)₆ / del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅ / dup(T)₆ / dup(T)₈
Variation Type: Indel Insertion and Deletion
Frequency: del(T)₉=0.000004 (1/264690, TOPMED)
dupT=0.1716 (1305/7605, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC02226 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	7605	TTTTTTTTTTTTTTTTTT=0.8155	TTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0084, TTTTTTTTTTTTTTTTTTT=0.1716, TTTTTTTTTTTTTTTTTTTTT=0.0018, TTTTTTTTTTTTTTTTTTTT=0.0026, TTTTTTTTTTTTTTTTTTTTTT=0.0000	0.760875	0.099433	0.139692	32
European	Sub	6445	TTTTTTTTTTTTTTTTTT=0.7826	TTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0099, TTTTTTTTTTTTTTTTTTT=0.2022, TTTTTTTTTTTTTTTTTTTTT=0.0022, TTTTTTTTTTTTTTTTTTTT=0.0031, TTTTTTTTTTTTTTTTTTTTTT=0.0000	0.717078	0.117911	0.165011	32
African	Sub	702	TTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	30	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	672	TTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	0	TTTTTTTTTTTTTTTTTT=0	TTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
East Asian	Sub	0	TTTTTTTTTTTTTTTTTT=0	TTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
Other Asian	Sub	0	TTTTTTTTTTTTTTTTTT=0	TTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
Latin American 1	Sub	38	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	246	TTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	36	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	138	TTTTTTTTTTTTTTTTTT=0.986	TTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.014, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000	0.971014	0.0	0.028986	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(T)₁₈=0.999996	del(T)₉=0.000004
Allele Frequency Aggregator	Total	Global	7605	(T)₁₈=0.8155	del(T)₉=0.0000, del(T)₆=0.0000, del(T)₅=0.0000, del(T)₄=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0084, dupT=0.1716, dupTT=0.0026, dupTTT=0.0018, dup(T)₄=0.0000
Allele Frequency Aggregator	European	Sub	6445	(T)₁₈=0.7826	del(T)₉=0.0000, del(T)₆=0.0000, del(T)₅=0.0000, del(T)₄=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0099, dupT=0.2022, dupTT=0.0031, dupTTT=0.0022, dup(T)₄=0.0000
Allele Frequency Aggregator	African	Sub	702	(T)₁₈=1.000	del(T)₉=0.000, del(T)₆=0.000, del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Latin American 2	Sub	246	(T)₁₈=1.000	del(T)₉=0.000, del(T)₆=0.000, del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Other	Sub	138	(T)₁₈=0.986	del(T)₉=0.000, del(T)₆=0.000, del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.014, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Latin American 1	Sub	38	(T)₁₈=1.00	del(T)₉=0.00, del(T)₆=0.00, del(T)₅=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00
Allele Frequency Aggregator	South Asian	Sub	36	(T)₁₈=1.00	del(T)₉=0.00, del(T)₆=0.00, del(T)₅=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00
Allele Frequency Aggregator	Asian	Sub	0	(T)₁₈=0	del(T)₉=0, del(T)₆=0, del(T)₅=0, del(T)₄=0, delTTT=0, delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)₄=0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.8449471_8449479del
GRCh38.p14 chr 5	NC_000005.10:g.8449474_8449479del
GRCh38.p14 chr 5	NC_000005.10:g.8449475_8449479del
GRCh38.p14 chr 5	NC_000005.10:g.8449476_8449479del
GRCh38.p14 chr 5	NC_000005.10:g.8449477_8449479del
GRCh38.p14 chr 5	NC_000005.10:g.8449478_8449479del
GRCh38.p14 chr 5	NC_000005.10:g.8449479del
GRCh38.p14 chr 5	NC_000005.10:g.8449479dup
GRCh38.p14 chr 5	NC_000005.10:g.8449478_8449479dup
GRCh38.p14 chr 5	NC_000005.10:g.8449477_8449479dup
GRCh38.p14 chr 5	NC_000005.10:g.8449476_8449479dup
GRCh38.p14 chr 5	NC_000005.10:g.8449475_8449479dup
GRCh38.p14 chr 5	NC_000005.10:g.8449474_8449479dup
GRCh38.p14 chr 5	NC_000005.10:g.8449472_8449479dup
GRCh37.p13 chr 5	NC_000005.9:g.8449584_8449592del
GRCh37.p13 chr 5	NC_000005.9:g.8449587_8449592del
GRCh37.p13 chr 5	NC_000005.9:g.8449588_8449592del
GRCh37.p13 chr 5	NC_000005.9:g.8449589_8449592del
GRCh37.p13 chr 5	NC_000005.9:g.8449590_8449592del
GRCh37.p13 chr 5	NC_000005.9:g.8449591_8449592del
GRCh37.p13 chr 5	NC_000005.9:g.8449592del
GRCh37.p13 chr 5	NC_000005.9:g.8449592dup
GRCh37.p13 chr 5	NC_000005.9:g.8449591_8449592dup
GRCh37.p13 chr 5	NC_000005.9:g.8449590_8449592dup
GRCh37.p13 chr 5	NC_000005.9:g.8449589_8449592dup
GRCh37.p13 chr 5	NC_000005.9:g.8449588_8449592dup
GRCh37.p13 chr 5	NC_000005.9:g.8449587_8449592dup
GRCh37.p13 chr 5	NC_000005.9:g.8449585_8449592dup

Gene: LINC02226, long intergenic non-protein coding RNA 2226 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC02226 transcript	NR_039984.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₈=	del(T)₉	del(T)₆	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅	dup(T)₆	dup(T)₈
GRCh38.p14 chr 5	NC_000005.10:g.8449462_8449479=	NC_000005.10:g.8449471_8449479del	NC_000005.10:g.8449474_8449479del	NC_000005.10:g.8449475_8449479del	NC_000005.10:g.8449476_8449479del	NC_000005.10:g.8449477_8449479del	NC_000005.10:g.8449478_8449479del	NC_000005.10:g.8449479del	NC_000005.10:g.8449479dup	NC_000005.10:g.8449478_8449479dup	NC_000005.10:g.8449477_8449479dup	NC_000005.10:g.8449476_8449479dup	NC_000005.10:g.8449475_8449479dup	NC_000005.10:g.8449474_8449479dup	NC_000005.10:g.8449472_8449479dup
GRCh37.p13 chr 5	NC_000005.9:g.8449575_8449592=	NC_000005.9:g.8449584_8449592del	NC_000005.9:g.8449587_8449592del	NC_000005.9:g.8449588_8449592del	NC_000005.9:g.8449589_8449592del	NC_000005.9:g.8449590_8449592del	NC_000005.9:g.8449591_8449592del	NC_000005.9:g.8449592del	NC_000005.9:g.8449592dup	NC_000005.9:g.8449591_8449592dup	NC_000005.9:g.8449590_8449592dup	NC_000005.9:g.8449589_8449592dup	NC_000005.9:g.8449588_8449592dup	NC_000005.9:g.8449587_8449592dup	NC_000005.9:g.8449585_8449592dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

41 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42627925	Mar 13, 2006 (126)
2	HGSV	ss83661840	Dec 14, 2007 (130)
3	HGSV	ss83666291	Dec 14, 2007 (130)
4	HUMANGENOME_JCVI	ss95385521	Feb 05, 2009 (130)
5	HUMANGENOME_JCVI	ss98671944	Feb 13, 2009 (130)
6	PJP	ss295211650	May 09, 2011 (142)
7	SWEGEN	ss2996410554	Nov 08, 2017 (151)
8	MCHAISSO	ss3064145479	Nov 08, 2017 (151)
9	MCHAISSO	ss3065015487	Nov 08, 2017 (151)
10	MCHAISSO	ss3066002343	Nov 08, 2017 (151)
11	PACBIO	ss3785018789	Jul 13, 2019 (153)
12	EVA	ss3829085466	Apr 26, 2020 (154)
13	GNOMAD	ss4098989727	Apr 26, 2021 (155)
14	GNOMAD	ss4098989728	Apr 26, 2021 (155)
15	GNOMAD	ss4098989729	Apr 26, 2021 (155)
16	GNOMAD	ss4098989730	Apr 26, 2021 (155)
17	GNOMAD	ss4098989731	Apr 26, 2021 (155)
18	GNOMAD	ss4098989732	Apr 26, 2021 (155)
19	GNOMAD	ss4098989733	Apr 26, 2021 (155)
20	GNOMAD	ss4098989734	Apr 26, 2021 (155)
21	GNOMAD	ss4098989735	Apr 26, 2021 (155)
22	GNOMAD	ss4098989736	Apr 26, 2021 (155)
23	GNOMAD	ss4098989737	Apr 26, 2021 (155)
24	GNOMAD	ss4098989738	Apr 26, 2021 (155)
25	TOPMED	ss4649010591	Apr 26, 2021 (155)
26	TOMMO_GENOMICS	ss5170303625	Apr 26, 2021 (155)
27	TOMMO_GENOMICS	ss5170303626	Apr 26, 2021 (155)
28	TOMMO_GENOMICS	ss5170303627	Apr 26, 2021 (155)
29	1000G_HIGH_COVERAGE	ss5262816225	Oct 13, 2022 (156)
30	1000G_HIGH_COVERAGE	ss5262816226	Oct 13, 2022 (156)
31	1000G_HIGH_COVERAGE	ss5262816227	Oct 13, 2022 (156)
32	1000G_HIGH_COVERAGE	ss5262816228	Oct 13, 2022 (156)
33	HUGCELL_USP	ss5461167767	Oct 13, 2022 (156)
34	HUGCELL_USP	ss5461167768	Oct 13, 2022 (156)
35	HUGCELL_USP	ss5461167769	Oct 13, 2022 (156)
36	TOMMO_GENOMICS	ss5705955594	Oct 13, 2022 (156)
37	TOMMO_GENOMICS	ss5705955596	Oct 13, 2022 (156)
38	TOMMO_GENOMICS	ss5705955597	Oct 13, 2022 (156)
39	EVA	ss5834495169	Oct 13, 2022 (156)
40	EVA	ss5834495170	Oct 13, 2022 (156)
41	EVA	ss5854674383	Oct 13, 2022 (156)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179424268 (NC_000005.10:8449461::T 54752/112156) Row 179424269 (NC_000005.10:8449461::TT 636/112142) Row 179424270 (NC_000005.10:8449461::TTT 169/112156)...	-	Apr 26, 2021 (155)
54	8.3KJPN Submission ignored due to conflicting rows: Row 28272932 (NC_000005.9:8449574::T 11933/16390) Row 28272933 (NC_000005.9:8449574::TT 51/16390) Row 28272934 (NC_000005.9:8449574:T: 1/16390)	-	Apr 26, 2021 (155)
55	8.3KJPN Submission ignored due to conflicting rows: Row 28272932 (NC_000005.9:8449574::T 11933/16390) Row 28272933 (NC_000005.9:8449574::TT 51/16390) Row 28272934 (NC_000005.9:8449574:T: 1/16390)	-	Apr 26, 2021 (155)
56	8.3KJPN Submission ignored due to conflicting rows: Row 28272932 (NC_000005.9:8449574::T 11933/16390) Row 28272933 (NC_000005.9:8449574::TT 51/16390) Row 28272934 (NC_000005.9:8449574:T: 1/16390)	-	Apr 26, 2021 (155)
57	14KJPN Submission ignored due to conflicting rows: Row 39792698 (NC_000005.10:8449461::T 20898/28256) Row 39792700 (NC_000005.10:8449461:T: 2/28256) Row 39792701 (NC_000005.10:8449461::TT 67/28256)	-	Oct 13, 2022 (156)
58	14KJPN Submission ignored due to conflicting rows: Row 39792698 (NC_000005.10:8449461::T 20898/28256) Row 39792700 (NC_000005.10:8449461:T: 2/28256) Row 39792701 (NC_000005.10:8449461::TT 67/28256)	-	Oct 13, 2022 (156)
59	14KJPN Submission ignored due to conflicting rows: Row 39792698 (NC_000005.10:8449461::T 20898/28256) Row 39792700 (NC_000005.10:8449461:T: 2/28256) Row 39792701 (NC_000005.10:8449461::TT 67/28256)	-	Oct 13, 2022 (156)
60	TopMed	NC_000005.10 - 8449462	Apr 26, 2021 (155)
61	ALFA	NC_000005.10 - 8449462	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs58097873	May 25, 2008 (130)
rs71898329	Aug 21, 2014 (142)
rs144686036	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
486388148, ss4649010591	NC_000005.10:8449461:TTTTTTTTT:	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss4098989738	NC_000005.10:8449461:TTTTT:	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4098989737	NC_000005.10:8449461:TTTT:	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4098989736	NC_000005.10:8449461:TTT:	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4098989735	NC_000005.10:8449461:TT:	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss2996410554, ss3785018789, ss5170303627	NC_000005.9:8449574:T:	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss4098989734, ss5262816226, ss5461167768, ss5705955596	NC_000005.10:8449461:T:	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss295211650	NC_000005.8:8502592::T	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss3829085466, ss5170303625, ss5834495169	NC_000005.9:8449574::T	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss3064145479, ss3065015487, ss3066002343, ss4098989727, ss5262816225, ss5461167767, ss5705955594, ss5854674383	NC_000005.10:8449461::T	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss98671944	NT_006576.16:8439574::T	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss42627925, ss95385521	NT_006576.16:8439592::T	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss5170303626, ss5834495170	NC_000005.9:8449574::TT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss4098989728, ss5262816227, ss5461167769, ss5705955597	NC_000005.10:8449461::TT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss83661840, ss83666291	NT_006576.16:8439592::TT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss4098989729, ss5262816228	NC_000005.10:8449461::TTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4098989730	NC_000005.10:8449461::TTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
8793804378	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss4098989731	NC_000005.10:8449461::TTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4098989732	NC_000005.10:8449461::TTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4098989733	NC_000005.10:8449461::TTTTTTTT	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss2439218654	NC_000005.9:8449574:TTTTTTTTT:	NC_000005.10:8449461:TTTTTTTTTTTTT… NC_000005.10:8449461:TTTTTTTTTTTTTTTTTT:TTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11370658

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11370658