Name: rs11427289
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11427289

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:42485450-42485462 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₄ / delTT / delT / dupT / du…
del(T)₄ / delTT / delT / dupT / dupTT / dup(T)₁₀
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.0940 (812/8642, ALFA)
delT=0.1589 (551/3467, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: KCNG3 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	8642	TTTTTTTTTTTTT=0.8302	TTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0940, TTTTTTTTTTTTTT=0.0758, TTTTTTTTTTTTTTT=0.0000	0.838658	0.022013	0.139329	32
European	Sub	7368	TTTTTTTTTTTTT=0.8010	TTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.1102, TTTTTTTTTTTTTT=0.0888, TTTTTTTTTTTTTTT=0.0000	0.805439	0.026546	0.168016	34
African	Sub	854	TTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	28	TTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	826	TTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	58	TTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	52	TTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	6	TTTTTTTTTTTTT=1.0	TTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	52	TTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	114	TTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	28	TTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	168	TTTTTTTTTTTTT=0.994	TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.006, TTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	8642	(T)₁₃=0.8302	del(T)₄=0.0000, delTT=0.0000, delT=0.0940, dupT=0.0758, dupTT=0.0000
Allele Frequency Aggregator	European	Sub	7368	(T)₁₃=0.8010	del(T)₄=0.0000, delTT=0.0000, delT=0.1102, dupT=0.0888, dupTT=0.0000
Allele Frequency Aggregator	African	Sub	854	(T)₁₃=1.000	del(T)₄=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Other	Sub	168	(T)₁₃=0.994	del(T)₄=0.000, delTT=0.000, delT=0.000, dupT=0.006, dupTT=0.000
Allele Frequency Aggregator	Latin American 2	Sub	114	(T)₁₃=1.000	del(T)₄=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Asian	Sub	58	(T)₁₃=1.00	del(T)₄=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	52	(T)₁₃=1.00	del(T)₄=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	South Asian	Sub	28	(T)₁₃=1.00	del(T)₄=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
1000Genomes	Global	Study-wide	3467	(T)₁₃=0.8411	delT=0.1589
1000Genomes	Europe	Sub	820	(T)₁₃=0.804	delT=0.196
1000Genomes	African	Sub	785	(T)₁₃=0.938	delT=0.062
1000Genomes	East Asian	Sub	734	(T)₁₃=0.932	delT=0.068
1000Genomes	South Asian	Sub	717	(T)₁₃=0.722	delT=0.278
1000Genomes	American	Sub	411	(T)₁₃=0.776	delT=0.224

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.42485459_42485462del
GRCh38.p14 chr 2	NC_000002.12:g.42485461_42485462del
GRCh38.p14 chr 2	NC_000002.12:g.42485462del
GRCh38.p14 chr 2	NC_000002.12:g.42485462dup
GRCh38.p14 chr 2	NC_000002.12:g.42485461_42485462dup
GRCh38.p14 chr 2	NC_000002.12:g.42485453_42485462dup
GRCh37.p13 chr 2	NC_000002.11:g.42712599_42712602del
GRCh37.p13 chr 2	NC_000002.11:g.42712601_42712602del
GRCh37.p13 chr 2	NC_000002.11:g.42712602del
GRCh37.p13 chr 2	NC_000002.11:g.42712602dup
GRCh37.p13 chr 2	NC_000002.11:g.42712601_42712602dup
GRCh37.p13 chr 2	NC_000002.11:g.42712593_42712602dup

Gene: KCNG3, potassium voltage-gated channel modifier subfamily G member 3 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
KCNG3 transcript variant 1	NM_133329.6:c.665+7384_66… NM_133329.6:c.665+7384_665+7387del	N/A	Intron Variant
KCNG3 transcript variant 2	NM_172344.3:c.632+7417_63… NM_172344.3:c.632+7417_632+7420del	N/A	Intron Variant
KCNG3 transcript variant X1	XR_007069666.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₃=	del(T)₄	delTT	delT	dupT	dupTT	dup(T)₁₀
GRCh38.p14 chr 2	NC_000002.12:g.42485450_42485462=	NC_000002.12:g.42485459_42485462del	NC_000002.12:g.42485461_42485462del	NC_000002.12:g.42485462del	NC_000002.12:g.42485462dup	NC_000002.12:g.42485461_42485462dup	NC_000002.12:g.42485453_42485462dup
GRCh37.p13 chr 2	NC_000002.11:g.42712590_42712602=	NC_000002.11:g.42712599_42712602del	NC_000002.11:g.42712601_42712602del	NC_000002.11:g.42712602del	NC_000002.11:g.42712602dup	NC_000002.11:g.42712601_42712602dup	NC_000002.11:g.42712593_42712602dup
KCNG3 transcript variant 1	NM_133329.5:c.665+7387=	NM_133329.5:c.665+7384_665+7387del	NM_133329.5:c.665+7386_665+7387del	NM_133329.5:c.665+7387del	NM_133329.5:c.665+7387dup	NM_133329.5:c.665+7386_665+7387dup	NM_133329.5:c.665+7378_665+7387dup
KCNG3 transcript variant 1	NM_133329.6:c.665+7387=	NM_133329.6:c.665+7384_665+7387del	NM_133329.6:c.665+7386_665+7387del	NM_133329.6:c.665+7387del	NM_133329.6:c.665+7387dup	NM_133329.6:c.665+7386_665+7387dup	NM_133329.6:c.665+7378_665+7387dup
KCNG3 transcript variant 2	NM_172344.2:c.632+7420=	NM_172344.2:c.632+7417_632+7420del	NM_172344.2:c.632+7419_632+7420del	NM_172344.2:c.632+7420del	NM_172344.2:c.632+7420dup	NM_172344.2:c.632+7419_632+7420dup	NM_172344.2:c.632+7411_632+7420dup
KCNG3 transcript variant 2	NM_172344.3:c.632+7420=	NM_172344.3:c.632+7417_632+7420del	NM_172344.3:c.632+7419_632+7420del	NM_172344.3:c.632+7420del	NM_172344.3:c.632+7420dup	NM_172344.3:c.632+7419_632+7420dup	NM_172344.3:c.632+7411_632+7420dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

46 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	BUSHMAN	ss193536560	Jul 04, 2010 (138)
2	GMI	ss288156000	May 04, 2012 (137)
3	SSMP	ss663308777	Apr 01, 2015 (144)
4	BILGI_BIOE	ss666146085	Apr 25, 2013 (138)
5	1000GENOMES	ss1368188869	Aug 21, 2014 (142)
6	1000GENOMES	ss1368188870	Aug 21, 2014 (142)
7	EVA_UK10K_ALSPAC	ss1702466215	Apr 01, 2015 (144)
8	EVA_UK10K_TWINSUK	ss1702466216	Apr 01, 2015 (144)
9	EVA_UK10K_ALSPAC	ss1709999111	Apr 01, 2015 (144)
10	EVA_UK10K_TWINSUK	ss1709999112	Apr 01, 2015 (144)
11	HAMMER_LAB	ss1796643463	Sep 08, 2015 (146)
12	SWEGEN	ss2989369640	Nov 08, 2017 (151)
13	MCHAISSO	ss3064784521	Nov 08, 2017 (151)
14	EVA_DECODE	ss3703724633	Jul 13, 2019 (153)
15	EVA_DECODE	ss3703724634	Jul 13, 2019 (153)
16	EVA_DECODE	ss3703724635	Jul 13, 2019 (153)
17	EVA_DECODE	ss3703724636	Jul 13, 2019 (153)
18	ACPOP	ss3728363236	Jul 13, 2019 (153)
19	ACPOP	ss3728363237	Jul 13, 2019 (153)
20	ACPOP	ss3728363238	Jul 13, 2019 (153)
21	PACBIO	ss3783842757	Jul 13, 2019 (153)
22	KHV_HUMAN_GENOMES	ss3801030279	Jul 13, 2019 (153)
23	KHV_HUMAN_GENOMES	ss3801030280	Jul 13, 2019 (153)
24	EVA	ss3826942439	Apr 25, 2020 (154)
25	EVA	ss3836879514	Apr 25, 2020 (154)
26	EVA	ss3842294617	Apr 25, 2020 (154)
27	GNOMAD	ss4039720259	Apr 26, 2021 (155)
28	GNOMAD	ss4039720260	Apr 26, 2021 (155)
29	GNOMAD	ss4039720261	Apr 26, 2021 (155)
30	GNOMAD	ss4039720262	Apr 26, 2021 (155)
31	GNOMAD	ss4039720263	Apr 26, 2021 (155)
32	TOMMO_GENOMICS	ss5150964050	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5150964051	Apr 26, 2021 (155)
34	TOMMO_GENOMICS	ss5150964052	Apr 26, 2021 (155)
35	1000G_HIGH_COVERAGE	ss5247759202	Oct 12, 2022 (156)
36	1000G_HIGH_COVERAGE	ss5247759203	Oct 12, 2022 (156)
37	1000G_HIGH_COVERAGE	ss5247759204	Oct 12, 2022 (156)
38	HUGCELL_USP	ss5447989242	Oct 12, 2022 (156)
39	HUGCELL_USP	ss5447989243	Oct 12, 2022 (156)
40	TOMMO_GENOMICS	ss5679472771	Oct 12, 2022 (156)
41	TOMMO_GENOMICS	ss5679472772	Oct 12, 2022 (156)
42	TOMMO_GENOMICS	ss5679472773	Oct 12, 2022 (156)
43	EVA	ss5819982869	Oct 12, 2022 (156)
44	EVA	ss5819982870	Oct 12, 2022 (156)
45	EVA	ss5930009782	Oct 12, 2022 (156)
46	EVA	ss5980052052	Oct 12, 2022 (156)
47	1000Genomes	NC_000002.11 - 42712590	Oct 11, 2018 (152)
48	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 4343843 (NC_000002.11:42712589::T 793/3854) Row 4343844 (NC_000002.11:42712589:T: 599/3854)	-	Oct 11, 2018 (152)
49	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 4343843 (NC_000002.11:42712589::T 793/3854) Row 4343844 (NC_000002.11:42712589:T: 599/3854)	-	Oct 11, 2018 (152)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 55499556 (NC_000002.12:42485449::T 38223/135664) Row 55499557 (NC_000002.12:42485449::TT 34/135808) Row 55499558 (NC_000002.12:42485449:T: 16822/135558)...	-	Apr 26, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 55499556 (NC_000002.12:42485449::T 38223/135664) Row 55499557 (NC_000002.12:42485449::TT 34/135808) Row 55499558 (NC_000002.12:42485449:T: 16822/135558)...	-	Apr 26, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 55499556 (NC_000002.12:42485449::T 38223/135664) Row 55499557 (NC_000002.12:42485449::TT 34/135808) Row 55499558 (NC_000002.12:42485449:T: 16822/135558)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 55499556 (NC_000002.12:42485449::T 38223/135664) Row 55499557 (NC_000002.12:42485449::TT 34/135808) Row 55499558 (NC_000002.12:42485449:T: 16822/135558)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 55499556 (NC_000002.12:42485449::T 38223/135664) Row 55499557 (NC_000002.12:42485449::TT 34/135808) Row 55499558 (NC_000002.12:42485449:T: 16822/135558)...	-	Apr 26, 2021 (155)
55	Northern Sweden Submission ignored due to conflicting rows: Row 1648101 (NC_000002.11:42712589::T 121/600) Row 1648102 (NC_000002.11:42712589:T: 92/600) Row 1648103 (NC_000002.11:42712589:TT: 1/600)	-	Jul 13, 2019 (153)
56	Northern Sweden Submission ignored due to conflicting rows: Row 1648101 (NC_000002.11:42712589::T 121/600) Row 1648102 (NC_000002.11:42712589:T: 92/600) Row 1648103 (NC_000002.11:42712589:TT: 1/600)	-	Jul 13, 2019 (153)
57	Northern Sweden Submission ignored due to conflicting rows: Row 1648101 (NC_000002.11:42712589::T 121/600) Row 1648102 (NC_000002.11:42712589:T: 92/600) Row 1648103 (NC_000002.11:42712589:TT: 1/600)	-	Jul 13, 2019 (153)
58	8.3KJPN Submission ignored due to conflicting rows: Row 8933357 (NC_000002.11:42712589::T 2823/16760) Row 8933358 (NC_000002.11:42712589:T: 368/16760) Row 8933359 (NC_000002.11:42712589::TT 2/16760)	-	Apr 26, 2021 (155)
59	8.3KJPN Submission ignored due to conflicting rows: Row 8933357 (NC_000002.11:42712589::T 2823/16760) Row 8933358 (NC_000002.11:42712589:T: 368/16760) Row 8933359 (NC_000002.11:42712589::TT 2/16760)	-	Apr 26, 2021 (155)
60	8.3KJPN Submission ignored due to conflicting rows: Row 8933357 (NC_000002.11:42712589::T 2823/16760) Row 8933358 (NC_000002.11:42712589:T: 368/16760) Row 8933359 (NC_000002.11:42712589::TT 2/16760)	-	Apr 26, 2021 (155)
61	14KJPN Submission ignored due to conflicting rows: Row 13309875 (NC_000002.12:42485449::T 4786/28258) Row 13309876 (NC_000002.12:42485449:T: 653/28258) Row 13309877 (NC_000002.12:42485449::TT 4/28258)	-	Oct 12, 2022 (156)
62	14KJPN Submission ignored due to conflicting rows: Row 13309875 (NC_000002.12:42485449::T 4786/28258) Row 13309876 (NC_000002.12:42485449:T: 653/28258) Row 13309877 (NC_000002.12:42485449::TT 4/28258)	-	Oct 12, 2022 (156)
63	14KJPN Submission ignored due to conflicting rows: Row 13309875 (NC_000002.12:42485449::T 4786/28258) Row 13309876 (NC_000002.12:42485449:T: 653/28258) Row 13309877 (NC_000002.12:42485449::TT 4/28258)	-	Oct 12, 2022 (156)
64	UK 10K study - Twins Submission ignored due to conflicting rows: Row 4343843 (NC_000002.11:42712589::T 694/3708) Row 4343844 (NC_000002.11:42712589:T: 544/3708)	-	Oct 11, 2018 (152)
65	UK 10K study - Twins Submission ignored due to conflicting rows: Row 4343843 (NC_000002.11:42712589::T 694/3708) Row 4343844 (NC_000002.11:42712589:T: 544/3708)	-	Oct 11, 2018 (152)
66	ALFA	NC_000002.12 - 42485450	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs11452818	May 11, 2012 (137)
rs11461959	May 15, 2013 (138)
rs35304232	May 11, 2012 (137)
rs66459546	May 11, 2012 (137)
rs67029006	May 11, 2012 (137)
rs67029007	Feb 26, 2009 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4039720263	NC_000002.12:42485449:TTTT:	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTT	(self)
10472466254	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTT	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTT	(self)
ss3728363238	NC_000002.11:42712589:TT:	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss3703724633, ss4039720262	NC_000002.12:42485449:TT:	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTT	(self)
10472466254	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTT	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTT	(self)
7820599, ss1368188869, ss1702466215, ss1702466216, ss2989369640, ss3728363237, ss3783842757, ss3826942439, ss5150964051, ss5819982870, ss5980052052	NC_000002.11:42712589:T:	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3801030279, ss4039720261, ss5247759202, ss5447989242, ss5679472772	NC_000002.12:42485449:T:	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
10472466254	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3703724634	NC_000002.12:42485450:T:	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss288156000	NC_000002.10:42566106::T	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss663308777, ss666146085, ss1796643463, ss3728363236, ss3836879514, ss5150964050, ss5819982869	NC_000002.11:42712589::T	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss1368188870, ss1709999111, ss1709999112	NC_000002.11:42712590::T	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3064784521, ss3842294617, ss4039720259, ss5247759203, ss5447989243, ss5679472771, ss5930009782	NC_000002.12:42485449::T	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
10472466254	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3801030280	NC_000002.12:42485450::T	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3703724635	NC_000002.12:42485451::T	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss193536560	NT_022184.16:26339330::T	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss5150964052	NC_000002.11:42712589::TT	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4039720260, ss5247759204, ss5679472773	NC_000002.12:42485449::TT	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
10472466254	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3703724636	NC_000002.12:42485451::TTTTTTTTTT	NC_000002.12:42485449:TTTTTTTTTTTT… NC_000002.12:42485449:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11427289

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11427289