Name: rs1208645375
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1208645375

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:37848960-37848988 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(CT)₉ / del(CT)₈ / del(CT)₇ / d…
del(CT)₉ / del(CT)₈ / del(CT)₇ / del(CT)₆ / del(CT)₅ / del(CT)₄ / del(CT)₃ / delCTCT / delCT / dupCT / dupCTCT / dup(CT)₃ / dup(CT)₄ / dup(CT)₅ / dup(CT)₆ / dup(CT)₇ / dup(CT)₈ / dup(CT)₉ / dup(CT)₁₀
Variation Type: Indel Insertion and Deletion
Frequency: del(CT)₉=0.00000 (0/11376, ALFA)
del(CT)₈=0.00000 (0/11376, ALFA)
del(CT)₆=0.00000 (0/11376, ALFA) (+ 11 more)
del(CT)₅=0.00000 (0/11376, ALFA)
del(CT)₄=0.00000 (0/11376, ALFA)
del(CT)₃=0.00000 (0/11376, ALFA)
delCTCT=0.00000 (0/11376, ALFA)
delCT=0.00000 (0/11376, ALFA)
dupCT=0.00000 (0/11376, ALFA)
dupCTCT=0.00000 (0/11376, ALFA)
dup(CT)₃=0.00000 (0/11376, ALFA)
dup(CT)₄=0.00000 (0/11376, ALFA)
dup(CT)₅=0.00000 (0/11376, ALFA)
dup(CT)₆=0.00000 (0/11376, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ITGA9-AS1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	11376	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00000	TCTCTCTCTCT=0.00000, TCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00000	1.0	N/A
European	Sub	7378	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.0000	TCTCTCTCTCT=0.0000, TCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000	1.0	N/A
African	Sub	2620	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.0000	TCTCTCTCTCT=0.0000, TCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000	1.0	N/A
African Others	Sub	100	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00	TCTCTCTCTCT=0.00, TCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00	1.0	N/A
African American	Sub	2520	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.0000	TCTCTCTCTCT=0.0000, TCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.0000	1.0	N/A
Asian	Sub	104	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.000	TCTCTCTCTCT=0.000, TCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000	1.0	N/A
East Asian	Sub	80	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00	TCTCTCTCTCT=0.00, TCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00	1.0	N/A
Other Asian	Sub	24	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00	TCTCTCTCTCT=0.00, TCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00	1.0	N/A
Latin American 1	Sub	142	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.000	TCTCTCTCTCT=0.000, TCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000	1.0	N/A
Latin American 2	Sub	590	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.000	TCTCTCTCTCT=0.000, TCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000	1.0	N/A
South Asian	Sub	92	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.00	TCTCTCTCTCT=0.00, TCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.00	1.0	N/A
Other	Sub	450	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT=1.000	TCTCTCTCTCT=0.000, TCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000, TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	11376	(TC)₁₄T=1.00000	del(CT)₉=0.00000, del(CT)₈=0.00000, del(CT)₆=0.00000, del(CT)₅=0.00000, del(CT)₄=0.00000, del(CT)₃=0.00000, delCTCT=0.00000, delCT=0.00000, dupCT=0.00000, dupCTCT=0.00000, dup(CT)₃=0.00000, dup(CT)₄=0.00000, dup(CT)₅=0.00000, dup(CT)₆=0.00000
Allele Frequency Aggregator	European	Sub	7378	(TC)₁₄T=1.0000	del(CT)₉=0.0000, del(CT)₈=0.0000, del(CT)₆=0.0000, del(CT)₅=0.0000, del(CT)₄=0.0000, del(CT)₃=0.0000, delCTCT=0.0000, delCT=0.0000, dupCT=0.0000, dupCTCT=0.0000, dup(CT)₃=0.0000, dup(CT)₄=0.0000, dup(CT)₅=0.0000, dup(CT)₆=0.0000
Allele Frequency Aggregator	African	Sub	2620	(TC)₁₄T=1.0000	del(CT)₉=0.0000, del(CT)₈=0.0000, del(CT)₆=0.0000, del(CT)₅=0.0000, del(CT)₄=0.0000, del(CT)₃=0.0000, delCTCT=0.0000, delCT=0.0000, dupCT=0.0000, dupCTCT=0.0000, dup(CT)₃=0.0000, dup(CT)₄=0.0000, dup(CT)₅=0.0000, dup(CT)₆=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	590	(TC)₁₄T=1.000	del(CT)₉=0.000, del(CT)₈=0.000, del(CT)₆=0.000, del(CT)₅=0.000, del(CT)₄=0.000, del(CT)₃=0.000, delCTCT=0.000, delCT=0.000, dupCT=0.000, dupCTCT=0.000, dup(CT)₃=0.000, dup(CT)₄=0.000, dup(CT)₅=0.000, dup(CT)₆=0.000
Allele Frequency Aggregator	Other	Sub	450	(TC)₁₄T=1.000	del(CT)₉=0.000, del(CT)₈=0.000, del(CT)₆=0.000, del(CT)₅=0.000, del(CT)₄=0.000, del(CT)₃=0.000, delCTCT=0.000, delCT=0.000, dupCT=0.000, dupCTCT=0.000, dup(CT)₃=0.000, dup(CT)₄=0.000, dup(CT)₅=0.000, dup(CT)₆=0.000
Allele Frequency Aggregator	Latin American 1	Sub	142	(TC)₁₄T=1.000	del(CT)₉=0.000, del(CT)₈=0.000, del(CT)₆=0.000, del(CT)₅=0.000, del(CT)₄=0.000, del(CT)₃=0.000, delCTCT=0.000, delCT=0.000, dupCT=0.000, dupCTCT=0.000, dup(CT)₃=0.000, dup(CT)₄=0.000, dup(CT)₅=0.000, dup(CT)₆=0.000
Allele Frequency Aggregator	Asian	Sub	104	(TC)₁₄T=1.000	del(CT)₉=0.000, del(CT)₈=0.000, del(CT)₆=0.000, del(CT)₅=0.000, del(CT)₄=0.000, del(CT)₃=0.000, delCTCT=0.000, delCT=0.000, dupCT=0.000, dupCTCT=0.000, dup(CT)₃=0.000, dup(CT)₄=0.000, dup(CT)₅=0.000, dup(CT)₆=0.000
Allele Frequency Aggregator	South Asian	Sub	92	(TC)₁₄T=1.00	del(CT)₉=0.00, del(CT)₈=0.00, del(CT)₆=0.00, del(CT)₅=0.00, del(CT)₄=0.00, del(CT)₃=0.00, delCTCT=0.00, delCT=0.00, dupCT=0.00, dupCTCT=0.00, dup(CT)₃=0.00, dup(CT)₄=0.00, dup(CT)₅=0.00, dup(CT)₆=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[5]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[6]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[7]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[8]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[9]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[10]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[11]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[12]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[13]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[15]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[16]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[17]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[18]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[19]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[20]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[21]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[22]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[23]
GRCh38.p14 chr 3	NC_000003.12:g.37848961CT[24]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[5]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[6]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[7]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[8]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[9]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[10]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[11]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[12]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[13]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[15]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[16]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[17]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[18]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[19]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[20]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[21]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[22]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[23]
GRCh37.p13 chr 3	NC_000003.11:g.37890452CT[24]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[5]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[6]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[7]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[8]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[9]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[10]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[11]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[12]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[13]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[15]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[16]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[17]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[18]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[19]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[20]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[21]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[22]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[23]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421618CT[24]

Gene: ITGA9-AS1, ITGA9 antisense RNA 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ITGA9-AS1 transcript variant 1	NR_110531.1:n.	N/A	Intron Variant
ITGA9-AS1 transcript variant 2	NR_110532.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(TC)₁₄T=	del(CT)₉	del(CT)₈	del(CT)₇	del(CT)₆	del(CT)₅	del(CT)₄	del(CT)₃	delCTCT	delCT	dupCT	dupCTCT	dup(CT)₃	dup(CT)₄	dup(CT)₅	dup(CT)₆	dup(CT)₇	dup(CT)₈	dup(CT)₉	dup(CT)₁₀
GRCh38.p14 chr 3	NC_000003.12:g.37848960_37848988=	NC_000003.12:g.37848961CT[5]	NC_000003.12:g.37848961CT[6]	NC_000003.12:g.37848961CT[7]	NC_000003.12:g.37848961CT[8]	NC_000003.12:g.37848961CT[9]	NC_000003.12:g.37848961CT[10]	NC_000003.12:g.37848961CT[11]	NC_000003.12:g.37848961CT[12]	NC_000003.12:g.37848961CT[13]	NC_000003.12:g.37848961CT[15]	NC_000003.12:g.37848961CT[16]	NC_000003.12:g.37848961CT[17]	NC_000003.12:g.37848961CT[18]	NC_000003.12:g.37848961CT[19]	NC_000003.12:g.37848961CT[20]	NC_000003.12:g.37848961CT[21]	NC_000003.12:g.37848961CT[22]	NC_000003.12:g.37848961CT[23]	NC_000003.12:g.37848961CT[24]
GRCh37.p13 chr 3	NC_000003.11:g.37890451_37890479=	NC_000003.11:g.37890452CT[5]	NC_000003.11:g.37890452CT[6]	NC_000003.11:g.37890452CT[7]	NC_000003.11:g.37890452CT[8]	NC_000003.11:g.37890452CT[9]	NC_000003.11:g.37890452CT[10]	NC_000003.11:g.37890452CT[11]	NC_000003.11:g.37890452CT[12]	NC_000003.11:g.37890452CT[13]	NC_000003.11:g.37890452CT[15]	NC_000003.11:g.37890452CT[16]	NC_000003.11:g.37890452CT[17]	NC_000003.11:g.37890452CT[18]	NC_000003.11:g.37890452CT[19]	NC_000003.11:g.37890452CT[20]	NC_000003.11:g.37890452CT[21]	NC_000003.11:g.37890452CT[22]	NC_000003.11:g.37890452CT[23]	NC_000003.11:g.37890452CT[24]
GRCh38.p14 chr 3 fix patch HG2069_PATCH	NW_025791771.1:g.421617_421645=	NW_025791771.1:g.421618CT[5]	NW_025791771.1:g.421618CT[6]	NW_025791771.1:g.421618CT[7]	NW_025791771.1:g.421618CT[8]	NW_025791771.1:g.421618CT[9]	NW_025791771.1:g.421618CT[10]	NW_025791771.1:g.421618CT[11]	NW_025791771.1:g.421618CT[12]	NW_025791771.1:g.421618CT[13]	NW_025791771.1:g.421618CT[15]	NW_025791771.1:g.421618CT[16]	NW_025791771.1:g.421618CT[17]	NW_025791771.1:g.421618CT[18]	NW_025791771.1:g.421618CT[19]	NW_025791771.1:g.421618CT[20]	NW_025791771.1:g.421618CT[21]	NW_025791771.1:g.421618CT[22]	NW_025791771.1:g.421618CT[23]	NW_025791771.1:g.421618CT[24]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

40 SubSNP, 29 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	MCHAISSO	ss3065875945	Nov 08, 2017 (151)
2	EVA_DECODE	ss3709029094	Jul 13, 2019 (153)
3	EVA_DECODE	ss3709029095	Jul 13, 2019 (153)
4	EVA_DECODE	ss3709029096	Jul 13, 2019 (153)
5	EVA_DECODE	ss3709029097	Jul 13, 2019 (153)
6	EVA_DECODE	ss3709029098	Jul 13, 2019 (153)
7	EVA_DECODE	ss3709029099	Jul 13, 2019 (153)
8	ACPOP	ss3729803536	Jul 13, 2019 (153)
9	ACPOP	ss3729803537	Jul 13, 2019 (153)
10	GNOMAD	ss4069230453	Apr 26, 2021 (155)
11	GNOMAD	ss4069230454	Apr 26, 2021 (155)
12	GNOMAD	ss4069230455	Apr 26, 2021 (155)
13	GNOMAD	ss4069230456	Apr 26, 2021 (155)
14	GNOMAD	ss4069230458	Apr 26, 2021 (155)
15	GNOMAD	ss4069230459	Apr 26, 2021 (155)
16	GNOMAD	ss4069230460	Apr 26, 2021 (155)
17	GNOMAD	ss4069230461	Apr 26, 2021 (155)
18	GNOMAD	ss4069230462	Apr 26, 2021 (155)
19	GNOMAD	ss4069230463	Apr 26, 2021 (155)
20	GNOMAD	ss4069230465	Apr 26, 2021 (155)
21	GNOMAD	ss4069230466	Apr 26, 2021 (155)
22	GNOMAD	ss4069230467	Apr 26, 2021 (155)
23	GNOMAD	ss4069230468	Apr 26, 2021 (155)
24	GNOMAD	ss4069230469	Apr 26, 2021 (155)
25	GNOMAD	ss4069230470	Apr 26, 2021 (155)
26	GNOMAD	ss4069230471	Apr 26, 2021 (155)
27	TOMMO_GENOMICS	ss5158678906	Apr 26, 2021 (155)
28	TOMMO_GENOMICS	ss5158678907	Apr 26, 2021 (155)
29	TOMMO_GENOMICS	ss5158678908	Apr 26, 2021 (155)
30	TOMMO_GENOMICS	ss5158678909	Apr 26, 2021 (155)
31	TOMMO_GENOMICS	ss5158678910	Apr 26, 2021 (155)
32	1000G_HIGH_COVERAGE	ss5253731018	Oct 13, 2022 (156)
33	1000G_HIGH_COVERAGE	ss5253731019	Oct 13, 2022 (156)
34	1000G_HIGH_COVERAGE	ss5253731020	Oct 13, 2022 (156)
35	HUGCELL_USP	ss5453162025	Oct 13, 2022 (156)
36	HUGCELL_USP	ss5453162026	Oct 13, 2022 (156)
37	TOMMO_GENOMICS	ss5690192435	Oct 13, 2022 (156)
38	TOMMO_GENOMICS	ss5690192436	Oct 13, 2022 (156)
39	TOMMO_GENOMICS	ss5690192437	Oct 13, 2022 (156)
40	TOMMO_GENOMICS	ss5690192438	Oct 13, 2022 (156)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 104723125 (NC_000003.12:37848959::TC 1827/88984) Row 104723126 (NC_000003.12:37848959::TCTC 475/89034) Row 104723127 (NC_000003.12:37848959::TCTCTC 42/89066)...	-	Apr 26, 2021 (155)
58	Northern Sweden Submission ignored due to conflicting rows: Row 3088401 (NC_000003.11:37890450::TC 12/578) Row 3088402 (NC_000003.11:37890450::TCTC 11/578)	-	Jul 13, 2019 (153)
59	Northern Sweden Submission ignored due to conflicting rows: Row 3088401 (NC_000003.11:37890450::TC 12/578) Row 3088402 (NC_000003.11:37890450::TCTC 11/578)	-	Jul 13, 2019 (153)
60	8.3KJPN Submission ignored due to conflicting rows: Row 16648213 (NC_000003.11:37890450:TC: 119/16746) Row 16648214 (NC_000003.11:37890450::TC 399/16746) Row 16648215 (NC_000003.11:37890450:TCTC: 99/16746)...	-	Apr 26, 2021 (155)
61	8.3KJPN Submission ignored due to conflicting rows: Row 16648213 (NC_000003.11:37890450:TC: 119/16746) Row 16648214 (NC_000003.11:37890450::TC 399/16746) Row 16648215 (NC_000003.11:37890450:TCTC: 99/16746)...	-	Apr 26, 2021 (155)
62	8.3KJPN Submission ignored due to conflicting rows: Row 16648213 (NC_000003.11:37890450:TC: 119/16746) Row 16648214 (NC_000003.11:37890450::TC 399/16746) Row 16648215 (NC_000003.11:37890450:TCTC: 99/16746)...	-	Apr 26, 2021 (155)
63	8.3KJPN Submission ignored due to conflicting rows: Row 16648213 (NC_000003.11:37890450:TC: 119/16746) Row 16648214 (NC_000003.11:37890450::TC 399/16746) Row 16648215 (NC_000003.11:37890450:TCTC: 99/16746)...	-	Apr 26, 2021 (155)
64	8.3KJPN Submission ignored due to conflicting rows: Row 16648213 (NC_000003.11:37890450:TC: 119/16746) Row 16648214 (NC_000003.11:37890450::TC 399/16746) Row 16648215 (NC_000003.11:37890450:TCTC: 99/16746)...	-	Apr 26, 2021 (155)
65	14KJPN Submission ignored due to conflicting rows: Row 24029539 (NC_000003.12:37848959::TC 687/28180) Row 24029540 (NC_000003.12:37848959:TCTC: 163/28180) Row 24029541 (NC_000003.12:37848959::TCTC 94/28180)...	-	Oct 13, 2022 (156)
66	14KJPN Submission ignored due to conflicting rows: Row 24029539 (NC_000003.12:37848959::TC 687/28180) Row 24029540 (NC_000003.12:37848959:TCTC: 163/28180) Row 24029541 (NC_000003.12:37848959::TCTC 94/28180)...	-	Oct 13, 2022 (156)
67	14KJPN Submission ignored due to conflicting rows: Row 24029539 (NC_000003.12:37848959::TC 687/28180) Row 24029540 (NC_000003.12:37848959:TCTC: 163/28180) Row 24029541 (NC_000003.12:37848959::TCTC 94/28180)...	-	Oct 13, 2022 (156)
68	14KJPN Submission ignored due to conflicting rows: Row 24029539 (NC_000003.12:37848959::TC 687/28180) Row 24029540 (NC_000003.12:37848959:TCTC: 163/28180) Row 24029541 (NC_000003.12:37848959::TCTC 94/28180)...	-	Oct 13, 2022 (156)
69	ALFA	NC_000003.12 - 37848960	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCT	(self)
ss4069230471	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCT	(self)
ss4069230470	NC_000003.12:37848959:TCTCTCTCTCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCT	(self)
ss4069230469	NC_000003.12:37848959:TCTCTCTCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCT	(self)
ss4069230468	NC_000003.12:37848959:TCTCTCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCT	(self)
ss3709029094, ss4069230467	NC_000003.12:37848959:TCTCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCT	(self)
ss5158678908	NC_000003.11:37890450:TCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230466, ss5690192436	NC_000003.12:37848959:TCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss3709029095	NC_000003.12:37848961:TCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss5158678906	NC_000003.11:37890450:TC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230465, ss5253731018	NC_000003.12:37848959:TC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss3709029096	NC_000003.12:37848963:TC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss3729803536, ss5158678907	NC_000003.11:37890450::TC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230453, ss5253731020, ss5453162025, ss5690192435	NC_000003.12:37848959::TC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss3709029097	NC_000003.12:37848965::TC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss3729803537, ss5158678909	NC_000003.11:37890450::TCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230454, ss5253731019, ss5453162026, ss5690192437	NC_000003.12:37848959::TCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss3709029098	NC_000003.12:37848965::TCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss5158678910	NC_000003.11:37890450::TCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230455, ss5690192438	NC_000003.12:37848959::TCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss3709029099	NC_000003.12:37848965::TCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230456	NC_000003.12:37848959::TCTCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss3065875945, ss4069230458	NC_000003.12:37848959::TCTCTCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230459	NC_000003.12:37848959::TCTCTCTCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
6716153962	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230460	NC_000003.12:37848959::TCTCTCTCTCT… NC_000003.12:37848959::TCTCTCTCTCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230461	NC_000003.12:37848959::TCTCTCTCTCT… NC_000003.12:37848959::TCTCTCTCTCTCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230462	NC_000003.12:37848959::TCTCTCTCTCT… NC_000003.12:37848959::TCTCTCTCTCTCTCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)
ss4069230463	NC_000003.12:37848959::TCTCTCTCTCT… NC_000003.12:37848959::TCTCTCTCTCTCTCTCTCTC	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3387784886	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTC:	NC_000003.12:37848959:TCTCTCTCTCTC… NC_000003.12:37848959:TCTCTCTCTCTCTCTCTCTCTCTCTCTCT:TCTCTCTCTCTCT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1208645375

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1208645375