Name: rs1289032640
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1289032640

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr16:67268711-67268715 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTT / dupT / dupTT / dupTTT / du…
delTT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅ / ins(T)₆ / ins(T)₇ / ins(T)₈
Variation Type: Indel Insertion and Deletion
Frequency: delTT=0.01295 (365/28178, 14KJPN)
delTT=0.01301 (217/16682, 8.3KJPN)
delTT=0.00000 (0/11828, ALFA) (+ 8 more)
dupT=0.00000 (0/11828, ALFA)
dupTT=0.00000 (0/11828, ALFA)
dupTTT=0.00000 (0/11828, ALFA)
dup(T)₄=0.00000 (0/11828, ALFA)
dup(T)₅=0.00000 (0/11828, ALFA)
ins(T)₆=0.00000 (0/11828, ALFA)
ins(T)₇=0.00000 (0/11828, ALFA)
ins(T)₈=0.00000 (0/11828, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SLC9A5 : Intron Variant
LOC124903701 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	11828	TTTTT=1.00000	TTT=0.00000, TTTTTT=0.00000, TTTTTTT=0.00000, TTTTTTTT=0.00000, TTTTTTTTT=0.00000, TTTTTTTTTT=0.00000, TTTTTTTTTTT=0.00000, TTTTTTTTTTTT=0.00000, TTTTTTTTTTTTT=0.00000	1.0	N/A
European	Sub	7614	TTTTT=1.0000	TTT=0.0000, TTTTTT=0.0000, TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000	1.0	N/A
African	Sub	2790	TTTTT=1.0000	TTT=0.0000, TTTTTT=0.0000, TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000	1.0	N/A
African Others	Sub	104	TTTTT=1.000	TTT=0.000, TTTTTT=0.000, TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000	1.0	N/A
African American	Sub	2686	TTTTT=1.0000	TTT=0.0000, TTTTTT=0.0000, TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000	1.0	N/A
Asian	Sub	108	TTTTT=1.000	TTT=0.000, TTTTTT=0.000, TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000	1.0	N/A
East Asian	Sub	84	TTTTT=1.00	TTT=0.00, TTTTTT=0.00, TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	1.0	N/A
Other Asian	Sub	24	TTTTT=1.00	TTT=0.00, TTTTTT=0.00, TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	1.0	N/A
Latin American 1	Sub	146	TTTTT=1.000	TTT=0.000, TTTTTT=0.000, TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000	1.0	N/A
Latin American 2	Sub	608	TTTTT=1.000	TTT=0.000, TTTTTT=0.000, TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000	1.0	N/A
South Asian	Sub	94	TTTTT=1.00	TTT=0.00, TTTTTT=0.00, TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00	1.0	N/A
Other	Sub	468	TTTTT=1.000	TTT=0.000, TTTTTT=0.000, TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
14KJPN	JAPANESE	Study-wide	28178	(T)₅=0.98705	delTT=0.01295
8.3KJPN	JAPANESE	Study-wide	16682	(T)₅=0.98699	delTT=0.01301
Allele Frequency Aggregator	Total	Global	11828	(T)₅=1.00000	delTT=0.00000, dupT=0.00000, dupTT=0.00000, dupTTT=0.00000, dup(T)₄=0.00000, dup(T)₅=0.00000, ins(T)₆=0.00000, ins(T)₇=0.00000, ins(T)₈=0.00000
Allele Frequency Aggregator	European	Sub	7614	(T)₅=1.0000	delTT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000, dup(T)₄=0.0000, dup(T)₅=0.0000, ins(T)₆=0.0000, ins(T)₇=0.0000, ins(T)₈=0.0000
Allele Frequency Aggregator	African	Sub	2790	(T)₅=1.0000	delTT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000, dup(T)₄=0.0000, dup(T)₅=0.0000, ins(T)₆=0.0000, ins(T)₇=0.0000, ins(T)₈=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	608	(T)₅=1.000	delTT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000, ins(T)₆=0.000, ins(T)₇=0.000, ins(T)₈=0.000
Allele Frequency Aggregator	Other	Sub	468	(T)₅=1.000	delTT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000, ins(T)₆=0.000, ins(T)₇=0.000, ins(T)₈=0.000
Allele Frequency Aggregator	Latin American 1	Sub	146	(T)₅=1.000	delTT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000, ins(T)₆=0.000, ins(T)₇=0.000, ins(T)₈=0.000
Allele Frequency Aggregator	Asian	Sub	108	(T)₅=1.000	delTT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000, ins(T)₆=0.000, ins(T)₇=0.000, ins(T)₈=0.000
Allele Frequency Aggregator	South Asian	Sub	94	(T)₅=1.00	delTT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00, ins(T)₆=0.00, ins(T)₇=0.00, ins(T)₈=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 16	NC_000016.10:g.67268714_67268715del
GRCh38.p14 chr 16	NC_000016.10:g.67268715dup
GRCh38.p14 chr 16	NC_000016.10:g.67268714_67268715dup
GRCh38.p14 chr 16	NC_000016.10:g.67268713_67268715dup
GRCh38.p14 chr 16	NC_000016.10:g.67268712_67268715dup
GRCh38.p14 chr 16	NC_000016.10:g.67268711_67268715dup
GRCh38.p14 chr 16	NC_000016.10:g.67268715_67268716insTTTTTT
GRCh38.p14 chr 16	NC_000016.10:g.67268715_67268716insTTTTTTT
GRCh38.p14 chr 16	NC_000016.10:g.67268715_67268716insTTTTTTTT
GRCh37.p13 chr 16	NC_000016.9:g.67302617_67302618del
GRCh37.p13 chr 16	NC_000016.9:g.67302618dup
GRCh37.p13 chr 16	NC_000016.9:g.67302617_67302618dup
GRCh37.p13 chr 16	NC_000016.9:g.67302616_67302618dup
GRCh37.p13 chr 16	NC_000016.9:g.67302615_67302618dup
GRCh37.p13 chr 16	NC_000016.9:g.67302614_67302618dup
GRCh37.p13 chr 16	NC_000016.9:g.67302618_67302619insTTTTTT
GRCh37.p13 chr 16	NC_000016.9:g.67302618_67302619insTTTTTTT
GRCh37.p13 chr 16	NC_000016.9:g.67302618_67302619insTTTTTTTT

Gene: SLC9A5, solute carrier family 9 member A5 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SLC9A5 transcript variant 2	NM_001323971.2:c.1843-202… NM_001323971.2:c.1843-2024_1843-2023del	N/A	Intron Variant
SLC9A5 transcript variant 3	NM_001323972.2:c.1916-202… NM_001323972.2:c.1916-2024_1916-2023del	N/A	Intron Variant
SLC9A5 transcript variant 4	NM_001323973.2:c.2216-202… NM_001323973.2:c.2216-2024_2216-2023del	N/A	Intron Variant
SLC9A5 transcript variant 5	NM_001323974.2:c.1331-202… NM_001323974.2:c.1331-2024_1331-2023del	N/A	Intron Variant
SLC9A5 transcript variant 6	NM_001323975.2:c.1334-202… NM_001323975.2:c.1334-2024_1334-2023del	N/A	Intron Variant
SLC9A5 transcript variant 1	NM_004594.3:c.2219-2024_2… NM_004594.3:c.2219-2024_2219-2023del	N/A	Intron Variant
SLC9A5 transcript variant 7	NR_136664.2:n.	N/A	Intron Variant
SLC9A5 transcript variant 8	NR_136665.2:n.	N/A	Intron Variant
SLC9A5 transcript variant 9	NR_136666.2:n.	N/A	Intron Variant
SLC9A5 transcript variant 10	NR_136667.2:n.	N/A	Intron Variant
SLC9A5 transcript variant X3	XM_017023594.2:c.	N/A	Genic Downstream Transcript Variant
SLC9A5 transcript variant X1	XM_047434519.1:c.	N/A	Genic Downstream Transcript Variant
SLC9A5 transcript variant X2	XM_047434520.1:c.	N/A	Genic Downstream Transcript Variant
SLC9A5 transcript variant X4	XM_047434521.1:c.	N/A	Genic Downstream Transcript Variant

Gene: LOC124903701, uncharacterized LOC124903701 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC124903701 transcript variant X2	XR_007065092.1:n.	N/A	Intron Variant
LOC124903701 transcript variant X1	XR_007065091.1:n.	N/A	Genic Downstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₅=	delTT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅	ins(T)₆	ins(T)₇	ins(T)₈
GRCh38.p14 chr 16	NC_000016.10:g.67268711_67268715=	NC_000016.10:g.67268714_67268715del	NC_000016.10:g.67268715dup	NC_000016.10:g.67268714_67268715dup	NC_000016.10:g.67268713_67268715dup	NC_000016.10:g.67268712_67268715dup	NC_000016.10:g.67268711_67268715dup	NC_000016.10:g.67268715_67268716insTTTTTT	NC_000016.10:g.67268715_67268716insTTTTTTT	NC_000016.10:g.67268715_67268716insTTTTTTTT
GRCh37.p13 chr 16	NC_000016.9:g.67302614_67302618=	NC_000016.9:g.67302617_67302618del	NC_000016.9:g.67302618dup	NC_000016.9:g.67302617_67302618dup	NC_000016.9:g.67302616_67302618dup	NC_000016.9:g.67302615_67302618dup	NC_000016.9:g.67302614_67302618dup	NC_000016.9:g.67302618_67302619insTTTTTT	NC_000016.9:g.67302618_67302619insTTTTTTT	NC_000016.9:g.67302618_67302619insTTTTTTTT
SLC9A5 transcript variant 2	NM_001323971.2:c.1843-2027=	NM_001323971.2:c.1843-2024_1843-2023del	NM_001323971.2:c.1843-2023dup	NM_001323971.2:c.1843-2024_1843-2023dup	NM_001323971.2:c.1843-2025_1843-2023dup	NM_001323971.2:c.1843-2026_1843-2023dup	NM_001323971.2:c.1843-2027_1843-2023dup	NM_001323971.2:c.1843-2023_1843-2022insTTTTTT	NM_001323971.2:c.1843-2023_1843-2022insTTTTTTT	NM_001323971.2:c.1843-2023_1843-2022insTTTTTTTT
SLC9A5 transcript variant 3	NM_001323972.2:c.1916-2027=	NM_001323972.2:c.1916-2024_1916-2023del	NM_001323972.2:c.1916-2023dup	NM_001323972.2:c.1916-2024_1916-2023dup	NM_001323972.2:c.1916-2025_1916-2023dup	NM_001323972.2:c.1916-2026_1916-2023dup	NM_001323972.2:c.1916-2027_1916-2023dup	NM_001323972.2:c.1916-2023_1916-2022insTTTTTT	NM_001323972.2:c.1916-2023_1916-2022insTTTTTTT	NM_001323972.2:c.1916-2023_1916-2022insTTTTTTTT
SLC9A5 transcript variant 4	NM_001323973.2:c.2216-2027=	NM_001323973.2:c.2216-2024_2216-2023del	NM_001323973.2:c.2216-2023dup	NM_001323973.2:c.2216-2024_2216-2023dup	NM_001323973.2:c.2216-2025_2216-2023dup	NM_001323973.2:c.2216-2026_2216-2023dup	NM_001323973.2:c.2216-2027_2216-2023dup	NM_001323973.2:c.2216-2023_2216-2022insTTTTTT	NM_001323973.2:c.2216-2023_2216-2022insTTTTTTT	NM_001323973.2:c.2216-2023_2216-2022insTTTTTTTT
SLC9A5 transcript variant 5	NM_001323974.2:c.1331-2027=	NM_001323974.2:c.1331-2024_1331-2023del	NM_001323974.2:c.1331-2023dup	NM_001323974.2:c.1331-2024_1331-2023dup	NM_001323974.2:c.1331-2025_1331-2023dup	NM_001323974.2:c.1331-2026_1331-2023dup	NM_001323974.2:c.1331-2027_1331-2023dup	NM_001323974.2:c.1331-2023_1331-2022insTTTTTT	NM_001323974.2:c.1331-2023_1331-2022insTTTTTTT	NM_001323974.2:c.1331-2023_1331-2022insTTTTTTTT
SLC9A5 transcript variant 6	NM_001323975.2:c.1334-2027=	NM_001323975.2:c.1334-2024_1334-2023del	NM_001323975.2:c.1334-2023dup	NM_001323975.2:c.1334-2024_1334-2023dup	NM_001323975.2:c.1334-2025_1334-2023dup	NM_001323975.2:c.1334-2026_1334-2023dup	NM_001323975.2:c.1334-2027_1334-2023dup	NM_001323975.2:c.1334-2023_1334-2022insTTTTTT	NM_001323975.2:c.1334-2023_1334-2022insTTTTTTT	NM_001323975.2:c.1334-2023_1334-2022insTTTTTTTT
SLC9A5 transcript variant 1	NM_004594.2:c.2219-2027=	NM_004594.2:c.2219-2024_2219-2023del	NM_004594.2:c.2219-2023dup	NM_004594.2:c.2219-2024_2219-2023dup	NM_004594.2:c.2219-2025_2219-2023dup	NM_004594.2:c.2219-2026_2219-2023dup	NM_004594.2:c.2219-2027_2219-2023dup	NM_004594.2:c.2219-2023_2219-2022insTTTTTT	NM_004594.2:c.2219-2023_2219-2022insTTTTTTT	NM_004594.2:c.2219-2023_2219-2022insTTTTTTTT
SLC9A5 transcript variant 1	NM_004594.3:c.2219-2027=	NM_004594.3:c.2219-2024_2219-2023del	NM_004594.3:c.2219-2023dup	NM_004594.3:c.2219-2024_2219-2023dup	NM_004594.3:c.2219-2025_2219-2023dup	NM_004594.3:c.2219-2026_2219-2023dup	NM_004594.3:c.2219-2027_2219-2023dup	NM_004594.3:c.2219-2023_2219-2022insTTTTTT	NM_004594.3:c.2219-2023_2219-2022insTTTTTTT	NM_004594.3:c.2219-2023_2219-2022insTTTTTTTT

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

12 SubSNP, 8 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	EVA_DECODE	ss3699479792	Jul 13, 2019 (153)
2	EVA_DECODE	ss3699479797	Jul 13, 2019 (153)
3	EVA_DECODE	ss3699479799	Jul 13, 2019 (153)
4	EVA_DECODE	ss3699479800	Jul 13, 2019 (153)
5	GNOMAD	ss4302909781	Apr 26, 2021 (155)
6	GNOMAD	ss4302909782	Apr 26, 2021 (155)
7	GNOMAD	ss4302909783	Apr 26, 2021 (155)
8	GNOMAD	ss4302909784	Apr 26, 2021 (155)
9	GNOMAD	ss4302909785	Apr 26, 2021 (155)
10	TOMMO_GENOMICS	ss5220070028	Apr 26, 2021 (155)
11	1000G_HIGH_COVERAGE	ss5301339292	Oct 16, 2022 (156)
12	TOMMO_GENOMICS	ss5775221470	Oct 16, 2022 (156)
13	gnomAD - Genomes Submission ignored due to conflicting rows: Row 492749490 (NC_000016.10:67268710::TT 140/82518) Row 492749491 (NC_000016.10:67268710::TTTT 110/82528) Row 492749492 (NC_000016.10:67268710::TTTTTT 10/82548)...	-	Apr 26, 2021 (155)
14	gnomAD - Genomes Submission ignored due to conflicting rows: Row 492749490 (NC_000016.10:67268710::TT 140/82518) Row 492749491 (NC_000016.10:67268710::TTTT 110/82528) Row 492749492 (NC_000016.10:67268710::TTTTTT 10/82548)...	-	Apr 26, 2021 (155)
15	gnomAD - Genomes Submission ignored due to conflicting rows: Row 492749490 (NC_000016.10:67268710::TT 140/82518) Row 492749491 (NC_000016.10:67268710::TTTT 110/82528) Row 492749492 (NC_000016.10:67268710::TTTTTT 10/82548)...	-	Apr 26, 2021 (155)
16	gnomAD - Genomes Submission ignored due to conflicting rows: Row 492749490 (NC_000016.10:67268710::TT 140/82518) Row 492749491 (NC_000016.10:67268710::TTTT 110/82528) Row 492749492 (NC_000016.10:67268710::TTTTTT 10/82548)...	-	Apr 26, 2021 (155)
17	gnomAD - Genomes Submission ignored due to conflicting rows: Row 492749490 (NC_000016.10:67268710::TT 140/82518) Row 492749491 (NC_000016.10:67268710::TTTT 110/82528) Row 492749492 (NC_000016.10:67268710::TTTTTT 10/82548)...	-	Apr 26, 2021 (155)
18	8.3KJPN	NC_000016.9 - 67302614	Apr 26, 2021 (155)
19	14KJPN	NC_000016.10 - 67268711	Oct 16, 2022 (156)
20	ALFA	NC_000016.10 - 67268711	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
78039335, ss5220070028	NC_000016.9:67302613:TT:	NC_000016.10:67268710:TTTTT:TTT	(self)
109058574, ss3699479792, ss4302909785, ss5301339292, ss5775221470	NC_000016.10:67268710:TT:	NC_000016.10:67268710:TTTTT:TTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTT	NC_000016.10:67268710:TTTTT:TTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT	(self)
ss4302909781	NC_000016.10:67268710::TT	NC_000016.10:67268710:TTTTT:TTTTTTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTTTTTT	NC_000016.10:67268710:TTTTT:TTTTTTT	(self)
ss3699479797	NC_000016.10:67268712::TT	NC_000016.10:67268710:TTTTT:TTTTTTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTT	(self)
ss4302909782	NC_000016.10:67268710::TTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTT	(self)
ss3699479799	NC_000016.10:67268713::TTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTT	(self)
ss3699479800	NC_000016.10:67268715::TTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTT	(self)
ss4302909783	NC_000016.10:67268710::TTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTTTT	(self)
ss4302909784	NC_000016.10:67268710::TTTTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTTTTT	(self)
7089447019	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3249378499	NC_000016.10:67268710::TTTTT	NC_000016.10:67268710:TTTTT:TTTTTT… NC_000016.10:67268710:TTTTT:TTTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1289032640

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1289032640