Name: rs1397795516
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1397795516

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr15:24918835-24918844 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delATAT / delAT / dupAT / dupATAT …
delATAT / delAT / dupAT / dupATAT / dup(AT)₄
Variation Type: Indel Insertion and Deletion
Frequency: delAT=0.000063 (7/110936, GnomAD)
delATAT=0.00000 (0/11772, ALFA)
delAT=0.00000 (0/11772, ALFA) (+ 3 more)
dupAT=0.00000 (0/11772, ALFA)
dupATAT=0.00000 (0/11772, ALFA)
dup(AT)₄=0.00000 (0/11772, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SNRPN : Intron Variant
SNHG14 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	11772	ATATATATAT=1.00000	ATATAT=0.00000, ATATATAT=0.00000, ATATATATATAT=0.00000, ATATATATATATAT=0.00000, ATATATATATATATATAT=0.00000	1.0	N/A
European	Sub	7616	ATATATATAT=1.0000	ATATAT=0.0000, ATATATAT=0.0000, ATATATATATAT=0.0000, ATATATATATATAT=0.0000, ATATATATATATATATAT=0.0000	1.0	N/A
African	Sub	2742	ATATATATAT=1.0000	ATATAT=0.0000, ATATATAT=0.0000, ATATATATATAT=0.0000, ATATATATATATAT=0.0000, ATATATATATATATATAT=0.0000	1.0	N/A
African Others	Sub	104	ATATATATAT=1.000	ATATAT=0.000, ATATATAT=0.000, ATATATATATAT=0.000, ATATATATATATAT=0.000, ATATATATATATATATAT=0.000	1.0	N/A
African American	Sub	2638	ATATATATAT=1.0000	ATATAT=0.0000, ATATATAT=0.0000, ATATATATATAT=0.0000, ATATATATATATAT=0.0000, ATATATATATATATATAT=0.0000	1.0	N/A
Asian	Sub	106	ATATATATAT=1.000	ATATAT=0.000, ATATATAT=0.000, ATATATATATAT=0.000, ATATATATATATAT=0.000, ATATATATATATATATAT=0.000	1.0	N/A
East Asian	Sub	82	ATATATATAT=1.00	ATATAT=0.00, ATATATAT=0.00, ATATATATATAT=0.00, ATATATATATATAT=0.00, ATATATATATATATATAT=0.00	1.0	N/A
Other Asian	Sub	24	ATATATATAT=1.00	ATATAT=0.00, ATATATAT=0.00, ATATATATATAT=0.00, ATATATATATATAT=0.00, ATATATATATATATATAT=0.00	1.0	N/A
Latin American 1	Sub	146	ATATATATAT=1.000	ATATAT=0.000, ATATATAT=0.000, ATATATATATAT=0.000, ATATATATATATAT=0.000, ATATATATATATATATAT=0.000	1.0	N/A
Latin American 2	Sub	604	ATATATATAT=1.000	ATATAT=0.000, ATATATAT=0.000, ATATATATATAT=0.000, ATATATATATATAT=0.000, ATATATATATATATATAT=0.000	1.0	N/A
South Asian	Sub	94	ATATATATAT=1.00	ATATAT=0.00, ATATATAT=0.00, ATATATATATAT=0.00, ATATATATATATAT=0.00, ATATATATATATATATAT=0.00	1.0	N/A
Other	Sub	464	ATATATATAT=1.000	ATATAT=0.000, ATATATAT=0.000, ATATATATATAT=0.000, ATATATATATATAT=0.000, ATATATATATATATATAT=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
gnomAD - Genomes	Global	Study-wide	110936	(AT)₅=0.999937	delAT=0.000063
gnomAD - Genomes	European	Sub	63462	(AT)₅=0.99989	delAT=0.00011
gnomAD - Genomes	African	Sub	29914	(AT)₅=1.00000	delAT=0.00000
gnomAD - Genomes	American	Sub	9912	(AT)₅=1.0000	delAT=0.0000
gnomAD - Genomes	Ashkenazi Jewish	Sub	3124	(AT)₅=1.0000	delAT=0.0000
gnomAD - Genomes	East Asian	Sub	2854	(AT)₅=1.0000	delAT=0.0000
gnomAD - Genomes	Other	Sub	1670	(AT)₅=1.0000	delAT=0.0000
Allele Frequency Aggregator	Total	Global	11772	(AT)₅=1.00000	delATAT=0.00000, delAT=0.00000, dupAT=0.00000, dupATAT=0.00000, dup(AT)₄=0.00000
Allele Frequency Aggregator	European	Sub	7616	(AT)₅=1.0000	delATAT=0.0000, delAT=0.0000, dupAT=0.0000, dupATAT=0.0000, dup(AT)₄=0.0000
Allele Frequency Aggregator	African	Sub	2742	(AT)₅=1.0000	delATAT=0.0000, delAT=0.0000, dupAT=0.0000, dupATAT=0.0000, dup(AT)₄=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	604	(AT)₅=1.000	delATAT=0.000, delAT=0.000, dupAT=0.000, dupATAT=0.000, dup(AT)₄=0.000
Allele Frequency Aggregator	Other	Sub	464	(AT)₅=1.000	delATAT=0.000, delAT=0.000, dupAT=0.000, dupATAT=0.000, dup(AT)₄=0.000
Allele Frequency Aggregator	Latin American 1	Sub	146	(AT)₅=1.000	delATAT=0.000, delAT=0.000, dupAT=0.000, dupATAT=0.000, dup(AT)₄=0.000
Allele Frequency Aggregator	Asian	Sub	106	(AT)₅=1.000	delATAT=0.000, delAT=0.000, dupAT=0.000, dupATAT=0.000, dup(AT)₄=0.000
Allele Frequency Aggregator	South Asian	Sub	94	(AT)₅=1.00	delATAT=0.00, delAT=0.00, dupAT=0.00, dupATAT=0.00, dup(AT)₄=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 15	NC_000015.10:g.24918835AT[3]
GRCh38.p14 chr 15	NC_000015.10:g.24918835AT[4]
GRCh38.p14 chr 15	NC_000015.10:g.24918835AT[6]
GRCh38.p14 chr 15	NC_000015.10:g.24918835AT[7]
GRCh38.p14 chr 15	NC_000015.10:g.24918835AT[9]
GRCh37.p13 chr 15	NC_000015.9:g.25163982AT[3]
GRCh37.p13 chr 15	NC_000015.9:g.25163982AT[4]
GRCh37.p13 chr 15	NC_000015.9:g.25163982AT[6]
GRCh37.p13 chr 15	NC_000015.9:g.25163982AT[7]
GRCh37.p13 chr 15	NC_000015.9:g.25163982AT[9]
PWSAS genomic region	NG_002690.1:g.137926AT[3]
PWSAS genomic region	NG_002690.1:g.137926AT[4]
PWSAS genomic region	NG_002690.1:g.137926AT[6]
PWSAS genomic region	NG_002690.1:g.137926AT[7]
PWSAS genomic region	NG_002690.1:g.137926AT[9]
SNRPN-SNURF RefSeqGene	NG_012958.1:g.100189AT[3]
SNRPN-SNURF RefSeqGene	NG_012958.1:g.100189AT[4]
SNRPN-SNURF RefSeqGene	NG_012958.1:g.100189AT[6]
SNRPN-SNURF RefSeqGene	NG_012958.1:g.100189AT[7]
SNRPN-SNURF RefSeqGene	NG_012958.1:g.100189AT[9]

Gene: SNRPN, small nuclear ribonucleoprotein polypeptide N (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SNRPN transcript variant 6	NM_001349454.2:c.-559-117… NM_001349454.2:c.-559-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 7	NM_001349455.2:c.-504-117… NM_001349455.2:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 8	NM_001349456.2:c.-579-117… NM_001349456.2:c.-579-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 9	NM_001349457.2:c.-504-117… NM_001349457.2:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 10	NM_001349458.2:c.-504-117… NM_001349458.2:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 11	NM_001349459.2:c.-504-117… NM_001349459.2:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 12	NM_001349460.2:c.-579-117… NM_001349460.2:c.-579-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 13	NM_001349461.2:c.-579-117… NM_001349461.2:c.-579-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 14	NM_001349462.2:c.-504-117… NM_001349462.2:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 19	NM_001378251.1:c.-737-117… NM_001378251.1:c.-737-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 26	NM_001400634.1:c.-353-117… NM_001400634.1:c.-353-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 27	NM_001400635.1:c.-678-117… NM_001400635.1:c.-678-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 28	NM_001400636.1:c.-487-317… NM_001400636.1:c.-487-31759AT[3]	N/A	Intron Variant
SNRPN transcript variant 29	NM_001400637.1:c.-504-117… NM_001400637.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 30	NM_001400638.1:c.-504-117… NM_001400638.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 31	NM_001400639.1:c.-620-117… NM_001400639.1:c.-620-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 32	NM_001400640.1:c.-794-117… NM_001400640.1:c.-794-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 33	NM_001400641.1:c.-620-117… NM_001400641.1:c.-620-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 34	NM_001400643.1:c.-620-117… NM_001400643.1:c.-620-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 35	NM_001400644.1:c.-710-117… NM_001400644.1:c.-710-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 36	NM_001400646.1:c.-751-117… NM_001400646.1:c.-751-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 37	NM_001400647.1:c.-620-117… NM_001400647.1:c.-620-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 38	NM_001400649.1:c.-635-117… NM_001400649.1:c.-635-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 39	NM_001400650.1:c.-390-432… NM_001400650.1:c.-390-43279AT[3]	N/A	Intron Variant
SNRPN transcript variant 40	NM_001400652.1:c.-791-117… NM_001400652.1:c.-791-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 41	NM_001400683.1:c.-695-117… NM_001400683.1:c.-695-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 42	NM_001400684.1:c.-692-117… NM_001400684.1:c.-692-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 43	NM_001400685.1:c.-504-117… NM_001400685.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 44	NM_001400686.1:c.-823-117… NM_001400686.1:c.-823-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 45	NM_001400687.1:c.-504-117… NM_001400687.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 46	NM_001400688.1:c.-504-117… NM_001400688.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 47	NM_001400689.1:c.-579-117… NM_001400689.1:c.-579-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 48	NM_001400690.1:c.-692-117… NM_001400690.1:c.-692-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 49	NM_001400691.1:c.-504-117… NM_001400691.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 50	NM_001400692.1:c.-692-117… NM_001400692.1:c.-692-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 51	NM_001400693.1:c.-635-117… NM_001400693.1:c.-635-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 52	NM_001400694.1:c.-635-117… NM_001400694.1:c.-635-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 53	NM_001400695.1:c.-678-117… NM_001400695.1:c.-678-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 54	NM_001400696.1:c.-628-117… NM_001400696.1:c.-628-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 55	NM_001400697.1:c.-318+322… NM_001400697.1:c.-318+32246AT[3]	N/A	Intron Variant
SNRPN transcript variant 56	NM_001400698.1:c.-469-117… NM_001400698.1:c.-469-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 57	NM_001400701.1:c.-751-117… NM_001400701.1:c.-751-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 58	NM_001400702.1:c.-695-117… NM_001400702.1:c.-695-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 59	NM_001400703.1:c.-883-117… NM_001400703.1:c.-883-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 60	NM_001400704.1:c.-692-117… NM_001400704.1:c.-692-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 61	NM_001400706.1:c.-635-117… NM_001400706.1:c.-635-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 62	NM_001400708.1:c.-620-117… NM_001400708.1:c.-620-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 63	NM_001400710.1:c.-808-117… NM_001400710.1:c.-808-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 64	NM_001400712.1:c.-1083-11… NM_001400712.1:c.-1083-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 65	NM_001400713.1:c.-692-117… NM_001400713.1:c.-692-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 66	NM_001400715.1:c.-620-117… NM_001400715.1:c.-620-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 67	NM_001400716.1:c.-620-117… NM_001400716.1:c.-620-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 68	NM_001400717.1:c.-506-317… NM_001400717.1:c.-506-31740AT[3]	N/A	Intron Variant
SNRPN transcript variant 69	NM_001400718.1:c.-635-117… NM_001400718.1:c.-635-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 70	NM_001400719.1:c.-504-117… NM_001400719.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 71	NM_001400720.1:c.-384-117… NM_001400720.1:c.-384-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 72	NM_001400721.1:c.-391+322… NM_001400721.1:c.-391+32246AT[3]	N/A	Intron Variant
SNRPN transcript variant 73	NM_001400722.1:c.-823-117… NM_001400722.1:c.-823-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 74	NM_001400723.1:c.-504-117… NM_001400723.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 75	NM_001400724.1:c.-678-117… NM_001400724.1:c.-678-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 86	NM_001400735.1:c.-390-432… NM_001400735.1:c.-390-43279AT[3]	N/A	Intron Variant
SNRPN transcript variant 87	NM_001400736.1:c.-391+322… NM_001400736.1:c.-391+32246AT[3]	N/A	Intron Variant
SNRPN transcript variant 88	NM_001400737.1:c.-353-117… NM_001400737.1:c.-353-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 89	NM_001400738.1:c.-620-117… NM_001400738.1:c.-620-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 90	NM_001400739.1:c.-767-117… NM_001400739.1:c.-767-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 91	NM_001400740.1:c.-979-117… NM_001400740.1:c.-979-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 92	NM_001400741.1:c.-504-117… NM_001400741.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 93	NM_001400742.1:c.-579-117… NM_001400742.1:c.-579-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 94	NM_001400743.1:c.-635-117… NM_001400743.1:c.-635-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 95	NM_001400744.1:c.-452-117… NM_001400744.1:c.-452-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 96	NM_001400745.1:c.-504-117… NM_001400745.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 97	NM_001400746.1:c.-579-117… NM_001400746.1:c.-579-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 98	NM_001400747.1:c.-544-117… NM_001400747.1:c.-544-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 99	NM_001400748.1:c.-504-117… NM_001400748.1:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 100	NM_001400753.1:c.-840-117… NM_001400753.1:c.-840-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 101	NM_001400754.1:c.-451-117… NM_001400754.1:c.-451-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 102	NM_001400755.1:c.-767-117… NM_001400755.1:c.-767-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 103	NM_001400756.1:c.-428-117… NM_001400756.1:c.-428-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 104	NM_001400757.1:c.-751-117… NM_001400757.1:c.-751-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 105	NM_001400758.1:c.-794-117… NM_001400758.1:c.-794-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 106	NM_001400759.1:c.-414+322… NM_001400759.1:c.-414+32263AT[3]	N/A	Intron Variant
SNRPN transcript variant 2	NM_022805.5:c.-504-1176AT… NM_022805.5:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 3	NM_022806.5:c.-504-1176AT… NM_022806.5:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 4	NM_022807.5:c.-504-1176AT… NM_022807.5:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 5	NM_022808.5:c.-504-1176AT… NM_022808.5:c.-504-1176AT[3]	N/A	Intron Variant
SNRPN transcript variant 15	NM_001349463.2:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 16	NM_001349464.2:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 17	NM_001349465.2:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 18	NM_001378249.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 20	NM_001378252.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 21	NM_001378253.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 22	NM_001378254.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 23	NM_001378255.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 24	NM_001378256.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 25	NM_001378257.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 76	NM_001400725.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 77	NM_001400726.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 78	NM_001400727.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 79	NM_001400728.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 80	NM_001400729.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 81	NM_001400730.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 82	NM_001400731.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 83	NM_001400732.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 84	NM_001400733.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 85	NM_001400734.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 107	NM_001400762.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 108	NM_001400763.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 109	NM_001400764.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 110	NM_001400765.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 111	NM_001400767.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 112	NM_001400768.1:c.	N/A	Genic Upstream Transcript Variant
SNRPN transcript variant 1	NM_003097.6:c.	N/A	Genic Upstream Transcript Variant

Gene: SNHG14, small nucleolar RNA host gene 14 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SNHG14 transcript	NR_146177.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(AT)₅=	delATAT	delAT	dupAT	dupATAT	dup(AT)₄
GRCh38.p14 chr 15	NC_000015.10:g.24918835_24918844=	NC_000015.10:g.24918835AT[3]	NC_000015.10:g.24918835AT[4]	NC_000015.10:g.24918835AT[6]	NC_000015.10:g.24918835AT[7]	NC_000015.10:g.24918835AT[9]
GRCh37.p13 chr 15	NC_000015.9:g.25163982_25163991=	NC_000015.9:g.25163982AT[3]	NC_000015.9:g.25163982AT[4]	NC_000015.9:g.25163982AT[6]	NC_000015.9:g.25163982AT[7]	NC_000015.9:g.25163982AT[9]
PWSAS genomic region	NG_002690.1:g.137926_137935=	NG_002690.1:g.137926AT[3]	NG_002690.1:g.137926AT[4]	NG_002690.1:g.137926AT[6]	NG_002690.1:g.137926AT[7]	NG_002690.1:g.137926AT[9]
SNRPN-SNURF RefSeqGene	NG_012958.1:g.100189_100198=	NG_012958.1:g.100189AT[3]	NG_012958.1:g.100189AT[4]	NG_012958.1:g.100189AT[6]	NG_012958.1:g.100189AT[7]	NG_012958.1:g.100189AT[9]
SNRPN transcript variant 6	NM_001349454.2:c.-559-1176=	NM_001349454.2:c.-559-1176AT[3]	NM_001349454.2:c.-559-1176AT[4]	NM_001349454.2:c.-559-1176AT[6]	NM_001349454.2:c.-559-1176AT[7]	NM_001349454.2:c.-559-1176AT[9]
SNRPN transcript variant 7	NM_001349455.2:c.-504-1176=	NM_001349455.2:c.-504-1176AT[3]	NM_001349455.2:c.-504-1176AT[4]	NM_001349455.2:c.-504-1176AT[6]	NM_001349455.2:c.-504-1176AT[7]	NM_001349455.2:c.-504-1176AT[9]
SNRPN transcript variant 8	NM_001349456.2:c.-579-1176=	NM_001349456.2:c.-579-1176AT[3]	NM_001349456.2:c.-579-1176AT[4]	NM_001349456.2:c.-579-1176AT[6]	NM_001349456.2:c.-579-1176AT[7]	NM_001349456.2:c.-579-1176AT[9]
SNRPN transcript variant 9	NM_001349457.2:c.-504-1176=	NM_001349457.2:c.-504-1176AT[3]	NM_001349457.2:c.-504-1176AT[4]	NM_001349457.2:c.-504-1176AT[6]	NM_001349457.2:c.-504-1176AT[7]	NM_001349457.2:c.-504-1176AT[9]
SNRPN transcript variant 10	NM_001349458.2:c.-504-1176=	NM_001349458.2:c.-504-1176AT[3]	NM_001349458.2:c.-504-1176AT[4]	NM_001349458.2:c.-504-1176AT[6]	NM_001349458.2:c.-504-1176AT[7]	NM_001349458.2:c.-504-1176AT[9]
SNRPN transcript variant 11	NM_001349459.2:c.-504-1176=	NM_001349459.2:c.-504-1176AT[3]	NM_001349459.2:c.-504-1176AT[4]	NM_001349459.2:c.-504-1176AT[6]	NM_001349459.2:c.-504-1176AT[7]	NM_001349459.2:c.-504-1176AT[9]
SNRPN transcript variant 12	NM_001349460.2:c.-579-1176=	NM_001349460.2:c.-579-1176AT[3]	NM_001349460.2:c.-579-1176AT[4]	NM_001349460.2:c.-579-1176AT[6]	NM_001349460.2:c.-579-1176AT[7]	NM_001349460.2:c.-579-1176AT[9]
SNRPN transcript variant 13	NM_001349461.2:c.-579-1176=	NM_001349461.2:c.-579-1176AT[3]	NM_001349461.2:c.-579-1176AT[4]	NM_001349461.2:c.-579-1176AT[6]	NM_001349461.2:c.-579-1176AT[7]	NM_001349461.2:c.-579-1176AT[9]
SNRPN transcript variant 14	NM_001349462.2:c.-504-1176=	NM_001349462.2:c.-504-1176AT[3]	NM_001349462.2:c.-504-1176AT[4]	NM_001349462.2:c.-504-1176AT[6]	NM_001349462.2:c.-504-1176AT[7]	NM_001349462.2:c.-504-1176AT[9]
SNRPN transcript variant 19	NM_001378251.1:c.-737-1176=	NM_001378251.1:c.-737-1176AT[3]	NM_001378251.1:c.-737-1176AT[4]	NM_001378251.1:c.-737-1176AT[6]	NM_001378251.1:c.-737-1176AT[7]	NM_001378251.1:c.-737-1176AT[9]
SNRPN transcript variant 26	NM_001400634.1:c.-353-1176=	NM_001400634.1:c.-353-1176AT[3]	NM_001400634.1:c.-353-1176AT[4]	NM_001400634.1:c.-353-1176AT[6]	NM_001400634.1:c.-353-1176AT[7]	NM_001400634.1:c.-353-1176AT[9]
SNRPN transcript variant 27	NM_001400635.1:c.-678-1176=	NM_001400635.1:c.-678-1176AT[3]	NM_001400635.1:c.-678-1176AT[4]	NM_001400635.1:c.-678-1176AT[6]	NM_001400635.1:c.-678-1176AT[7]	NM_001400635.1:c.-678-1176AT[9]
SNRPN transcript variant 28	NM_001400636.1:c.-487-31759=	NM_001400636.1:c.-487-31759AT[3]	NM_001400636.1:c.-487-31759AT[4]	NM_001400636.1:c.-487-31759AT[6]	NM_001400636.1:c.-487-31759AT[7]	NM_001400636.1:c.-487-31759AT[9]
SNRPN transcript variant 29	NM_001400637.1:c.-504-1176=	NM_001400637.1:c.-504-1176AT[3]	NM_001400637.1:c.-504-1176AT[4]	NM_001400637.1:c.-504-1176AT[6]	NM_001400637.1:c.-504-1176AT[7]	NM_001400637.1:c.-504-1176AT[9]
SNRPN transcript variant 30	NM_001400638.1:c.-504-1176=	NM_001400638.1:c.-504-1176AT[3]	NM_001400638.1:c.-504-1176AT[4]	NM_001400638.1:c.-504-1176AT[6]	NM_001400638.1:c.-504-1176AT[7]	NM_001400638.1:c.-504-1176AT[9]
SNRPN transcript variant 31	NM_001400639.1:c.-620-1176=	NM_001400639.1:c.-620-1176AT[3]	NM_001400639.1:c.-620-1176AT[4]	NM_001400639.1:c.-620-1176AT[6]	NM_001400639.1:c.-620-1176AT[7]	NM_001400639.1:c.-620-1176AT[9]
SNRPN transcript variant 32	NM_001400640.1:c.-794-1176=	NM_001400640.1:c.-794-1176AT[3]	NM_001400640.1:c.-794-1176AT[4]	NM_001400640.1:c.-794-1176AT[6]	NM_001400640.1:c.-794-1176AT[7]	NM_001400640.1:c.-794-1176AT[9]
SNRPN transcript variant 33	NM_001400641.1:c.-620-1176=	NM_001400641.1:c.-620-1176AT[3]	NM_001400641.1:c.-620-1176AT[4]	NM_001400641.1:c.-620-1176AT[6]	NM_001400641.1:c.-620-1176AT[7]	NM_001400641.1:c.-620-1176AT[9]
SNRPN transcript variant 34	NM_001400643.1:c.-620-1176=	NM_001400643.1:c.-620-1176AT[3]	NM_001400643.1:c.-620-1176AT[4]	NM_001400643.1:c.-620-1176AT[6]	NM_001400643.1:c.-620-1176AT[7]	NM_001400643.1:c.-620-1176AT[9]
SNRPN transcript variant 35	NM_001400644.1:c.-710-1176=	NM_001400644.1:c.-710-1176AT[3]	NM_001400644.1:c.-710-1176AT[4]	NM_001400644.1:c.-710-1176AT[6]	NM_001400644.1:c.-710-1176AT[7]	NM_001400644.1:c.-710-1176AT[9]
SNRPN transcript variant 36	NM_001400646.1:c.-751-1176=	NM_001400646.1:c.-751-1176AT[3]	NM_001400646.1:c.-751-1176AT[4]	NM_001400646.1:c.-751-1176AT[6]	NM_001400646.1:c.-751-1176AT[7]	NM_001400646.1:c.-751-1176AT[9]
SNRPN transcript variant 37	NM_001400647.1:c.-620-1176=	NM_001400647.1:c.-620-1176AT[3]	NM_001400647.1:c.-620-1176AT[4]	NM_001400647.1:c.-620-1176AT[6]	NM_001400647.1:c.-620-1176AT[7]	NM_001400647.1:c.-620-1176AT[9]
SNRPN transcript variant 38	NM_001400649.1:c.-635-1176=	NM_001400649.1:c.-635-1176AT[3]	NM_001400649.1:c.-635-1176AT[4]	NM_001400649.1:c.-635-1176AT[6]	NM_001400649.1:c.-635-1176AT[7]	NM_001400649.1:c.-635-1176AT[9]
SNRPN transcript variant 39	NM_001400650.1:c.-390-43279=	NM_001400650.1:c.-390-43279AT[3]	NM_001400650.1:c.-390-43279AT[4]	NM_001400650.1:c.-390-43279AT[6]	NM_001400650.1:c.-390-43279AT[7]	NM_001400650.1:c.-390-43279AT[9]
SNRPN transcript variant 40	NM_001400652.1:c.-791-1176=	NM_001400652.1:c.-791-1176AT[3]	NM_001400652.1:c.-791-1176AT[4]	NM_001400652.1:c.-791-1176AT[6]	NM_001400652.1:c.-791-1176AT[7]	NM_001400652.1:c.-791-1176AT[9]
SNRPN transcript variant 41	NM_001400683.1:c.-695-1176=	NM_001400683.1:c.-695-1176AT[3]	NM_001400683.1:c.-695-1176AT[4]	NM_001400683.1:c.-695-1176AT[6]	NM_001400683.1:c.-695-1176AT[7]	NM_001400683.1:c.-695-1176AT[9]
SNRPN transcript variant 42	NM_001400684.1:c.-692-1176=	NM_001400684.1:c.-692-1176AT[3]	NM_001400684.1:c.-692-1176AT[4]	NM_001400684.1:c.-692-1176AT[6]	NM_001400684.1:c.-692-1176AT[7]	NM_001400684.1:c.-692-1176AT[9]
SNRPN transcript variant 43	NM_001400685.1:c.-504-1176=	NM_001400685.1:c.-504-1176AT[3]	NM_001400685.1:c.-504-1176AT[4]	NM_001400685.1:c.-504-1176AT[6]	NM_001400685.1:c.-504-1176AT[7]	NM_001400685.1:c.-504-1176AT[9]
SNRPN transcript variant 44	NM_001400686.1:c.-823-1176=	NM_001400686.1:c.-823-1176AT[3]	NM_001400686.1:c.-823-1176AT[4]	NM_001400686.1:c.-823-1176AT[6]	NM_001400686.1:c.-823-1176AT[7]	NM_001400686.1:c.-823-1176AT[9]
SNRPN transcript variant 45	NM_001400687.1:c.-504-1176=	NM_001400687.1:c.-504-1176AT[3]	NM_001400687.1:c.-504-1176AT[4]	NM_001400687.1:c.-504-1176AT[6]	NM_001400687.1:c.-504-1176AT[7]	NM_001400687.1:c.-504-1176AT[9]
SNRPN transcript variant 46	NM_001400688.1:c.-504-1176=	NM_001400688.1:c.-504-1176AT[3]	NM_001400688.1:c.-504-1176AT[4]	NM_001400688.1:c.-504-1176AT[6]	NM_001400688.1:c.-504-1176AT[7]	NM_001400688.1:c.-504-1176AT[9]
SNRPN transcript variant 47	NM_001400689.1:c.-579-1176=	NM_001400689.1:c.-579-1176AT[3]	NM_001400689.1:c.-579-1176AT[4]	NM_001400689.1:c.-579-1176AT[6]	NM_001400689.1:c.-579-1176AT[7]	NM_001400689.1:c.-579-1176AT[9]
SNRPN transcript variant 48	NM_001400690.1:c.-692-1176=	NM_001400690.1:c.-692-1176AT[3]	NM_001400690.1:c.-692-1176AT[4]	NM_001400690.1:c.-692-1176AT[6]	NM_001400690.1:c.-692-1176AT[7]	NM_001400690.1:c.-692-1176AT[9]
SNRPN transcript variant 49	NM_001400691.1:c.-504-1176=	NM_001400691.1:c.-504-1176AT[3]	NM_001400691.1:c.-504-1176AT[4]	NM_001400691.1:c.-504-1176AT[6]	NM_001400691.1:c.-504-1176AT[7]	NM_001400691.1:c.-504-1176AT[9]
SNRPN transcript variant 50	NM_001400692.1:c.-692-1176=	NM_001400692.1:c.-692-1176AT[3]	NM_001400692.1:c.-692-1176AT[4]	NM_001400692.1:c.-692-1176AT[6]	NM_001400692.1:c.-692-1176AT[7]	NM_001400692.1:c.-692-1176AT[9]
SNRPN transcript variant 51	NM_001400693.1:c.-635-1176=	NM_001400693.1:c.-635-1176AT[3]	NM_001400693.1:c.-635-1176AT[4]	NM_001400693.1:c.-635-1176AT[6]	NM_001400693.1:c.-635-1176AT[7]	NM_001400693.1:c.-635-1176AT[9]
SNRPN transcript variant 52	NM_001400694.1:c.-635-1176=	NM_001400694.1:c.-635-1176AT[3]	NM_001400694.1:c.-635-1176AT[4]	NM_001400694.1:c.-635-1176AT[6]	NM_001400694.1:c.-635-1176AT[7]	NM_001400694.1:c.-635-1176AT[9]
SNRPN transcript variant 53	NM_001400695.1:c.-678-1176=	NM_001400695.1:c.-678-1176AT[3]	NM_001400695.1:c.-678-1176AT[4]	NM_001400695.1:c.-678-1176AT[6]	NM_001400695.1:c.-678-1176AT[7]	NM_001400695.1:c.-678-1176AT[9]
SNRPN transcript variant 54	NM_001400696.1:c.-628-1176=	NM_001400696.1:c.-628-1176AT[3]	NM_001400696.1:c.-628-1176AT[4]	NM_001400696.1:c.-628-1176AT[6]	NM_001400696.1:c.-628-1176AT[7]	NM_001400696.1:c.-628-1176AT[9]
SNRPN transcript variant 55	NM_001400697.1:c.-318+32246=	NM_001400697.1:c.-318+32246AT[3]	NM_001400697.1:c.-318+32246AT[4]	NM_001400697.1:c.-318+32246AT[6]	NM_001400697.1:c.-318+32246AT[7]	NM_001400697.1:c.-318+32246AT[9]
SNRPN transcript variant 56	NM_001400698.1:c.-469-1176=	NM_001400698.1:c.-469-1176AT[3]	NM_001400698.1:c.-469-1176AT[4]	NM_001400698.1:c.-469-1176AT[6]	NM_001400698.1:c.-469-1176AT[7]	NM_001400698.1:c.-469-1176AT[9]
SNRPN transcript variant 57	NM_001400701.1:c.-751-1176=	NM_001400701.1:c.-751-1176AT[3]	NM_001400701.1:c.-751-1176AT[4]	NM_001400701.1:c.-751-1176AT[6]	NM_001400701.1:c.-751-1176AT[7]	NM_001400701.1:c.-751-1176AT[9]
SNRPN transcript variant 58	NM_001400702.1:c.-695-1176=	NM_001400702.1:c.-695-1176AT[3]	NM_001400702.1:c.-695-1176AT[4]	NM_001400702.1:c.-695-1176AT[6]	NM_001400702.1:c.-695-1176AT[7]	NM_001400702.1:c.-695-1176AT[9]
SNRPN transcript variant 59	NM_001400703.1:c.-883-1176=	NM_001400703.1:c.-883-1176AT[3]	NM_001400703.1:c.-883-1176AT[4]	NM_001400703.1:c.-883-1176AT[6]	NM_001400703.1:c.-883-1176AT[7]	NM_001400703.1:c.-883-1176AT[9]
SNRPN transcript variant 60	NM_001400704.1:c.-692-1176=	NM_001400704.1:c.-692-1176AT[3]	NM_001400704.1:c.-692-1176AT[4]	NM_001400704.1:c.-692-1176AT[6]	NM_001400704.1:c.-692-1176AT[7]	NM_001400704.1:c.-692-1176AT[9]
SNRPN transcript variant 61	NM_001400706.1:c.-635-1176=	NM_001400706.1:c.-635-1176AT[3]	NM_001400706.1:c.-635-1176AT[4]	NM_001400706.1:c.-635-1176AT[6]	NM_001400706.1:c.-635-1176AT[7]	NM_001400706.1:c.-635-1176AT[9]
SNRPN transcript variant 62	NM_001400708.1:c.-620-1176=	NM_001400708.1:c.-620-1176AT[3]	NM_001400708.1:c.-620-1176AT[4]	NM_001400708.1:c.-620-1176AT[6]	NM_001400708.1:c.-620-1176AT[7]	NM_001400708.1:c.-620-1176AT[9]
SNRPN transcript variant 63	NM_001400710.1:c.-808-1176=	NM_001400710.1:c.-808-1176AT[3]	NM_001400710.1:c.-808-1176AT[4]	NM_001400710.1:c.-808-1176AT[6]	NM_001400710.1:c.-808-1176AT[7]	NM_001400710.1:c.-808-1176AT[9]
SNRPN transcript variant 64	NM_001400712.1:c.-1083-1176=	NM_001400712.1:c.-1083-1176AT[3]	NM_001400712.1:c.-1083-1176AT[4]	NM_001400712.1:c.-1083-1176AT[6]	NM_001400712.1:c.-1083-1176AT[7]	NM_001400712.1:c.-1083-1176AT[9]
SNRPN transcript variant 65	NM_001400713.1:c.-692-1176=	NM_001400713.1:c.-692-1176AT[3]	NM_001400713.1:c.-692-1176AT[4]	NM_001400713.1:c.-692-1176AT[6]	NM_001400713.1:c.-692-1176AT[7]	NM_001400713.1:c.-692-1176AT[9]
SNRPN transcript variant 66	NM_001400715.1:c.-620-1176=	NM_001400715.1:c.-620-1176AT[3]	NM_001400715.1:c.-620-1176AT[4]	NM_001400715.1:c.-620-1176AT[6]	NM_001400715.1:c.-620-1176AT[7]	NM_001400715.1:c.-620-1176AT[9]
SNRPN transcript variant 67	NM_001400716.1:c.-620-1176=	NM_001400716.1:c.-620-1176AT[3]	NM_001400716.1:c.-620-1176AT[4]	NM_001400716.1:c.-620-1176AT[6]	NM_001400716.1:c.-620-1176AT[7]	NM_001400716.1:c.-620-1176AT[9]
SNRPN transcript variant 68	NM_001400717.1:c.-506-31740=	NM_001400717.1:c.-506-31740AT[3]	NM_001400717.1:c.-506-31740AT[4]	NM_001400717.1:c.-506-31740AT[6]	NM_001400717.1:c.-506-31740AT[7]	NM_001400717.1:c.-506-31740AT[9]
SNRPN transcript variant 69	NM_001400718.1:c.-635-1176=	NM_001400718.1:c.-635-1176AT[3]	NM_001400718.1:c.-635-1176AT[4]	NM_001400718.1:c.-635-1176AT[6]	NM_001400718.1:c.-635-1176AT[7]	NM_001400718.1:c.-635-1176AT[9]
SNRPN transcript variant 70	NM_001400719.1:c.-504-1176=	NM_001400719.1:c.-504-1176AT[3]	NM_001400719.1:c.-504-1176AT[4]	NM_001400719.1:c.-504-1176AT[6]	NM_001400719.1:c.-504-1176AT[7]	NM_001400719.1:c.-504-1176AT[9]
SNRPN transcript variant 71	NM_001400720.1:c.-384-1176=	NM_001400720.1:c.-384-1176AT[3]	NM_001400720.1:c.-384-1176AT[4]	NM_001400720.1:c.-384-1176AT[6]	NM_001400720.1:c.-384-1176AT[7]	NM_001400720.1:c.-384-1176AT[9]
SNRPN transcript variant 72	NM_001400721.1:c.-391+32246=	NM_001400721.1:c.-391+32246AT[3]	NM_001400721.1:c.-391+32246AT[4]	NM_001400721.1:c.-391+32246AT[6]	NM_001400721.1:c.-391+32246AT[7]	NM_001400721.1:c.-391+32246AT[9]
SNRPN transcript variant 73	NM_001400722.1:c.-823-1176=	NM_001400722.1:c.-823-1176AT[3]	NM_001400722.1:c.-823-1176AT[4]	NM_001400722.1:c.-823-1176AT[6]	NM_001400722.1:c.-823-1176AT[7]	NM_001400722.1:c.-823-1176AT[9]
SNRPN transcript variant 74	NM_001400723.1:c.-504-1176=	NM_001400723.1:c.-504-1176AT[3]	NM_001400723.1:c.-504-1176AT[4]	NM_001400723.1:c.-504-1176AT[6]	NM_001400723.1:c.-504-1176AT[7]	NM_001400723.1:c.-504-1176AT[9]
SNRPN transcript variant 75	NM_001400724.1:c.-678-1176=	NM_001400724.1:c.-678-1176AT[3]	NM_001400724.1:c.-678-1176AT[4]	NM_001400724.1:c.-678-1176AT[6]	NM_001400724.1:c.-678-1176AT[7]	NM_001400724.1:c.-678-1176AT[9]
SNRPN transcript variant 86	NM_001400735.1:c.-390-43279=	NM_001400735.1:c.-390-43279AT[3]	NM_001400735.1:c.-390-43279AT[4]	NM_001400735.1:c.-390-43279AT[6]	NM_001400735.1:c.-390-43279AT[7]	NM_001400735.1:c.-390-43279AT[9]
SNRPN transcript variant 87	NM_001400736.1:c.-391+32246=	NM_001400736.1:c.-391+32246AT[3]	NM_001400736.1:c.-391+32246AT[4]	NM_001400736.1:c.-391+32246AT[6]	NM_001400736.1:c.-391+32246AT[7]	NM_001400736.1:c.-391+32246AT[9]
SNRPN transcript variant 88	NM_001400737.1:c.-353-1176=	NM_001400737.1:c.-353-1176AT[3]	NM_001400737.1:c.-353-1176AT[4]	NM_001400737.1:c.-353-1176AT[6]	NM_001400737.1:c.-353-1176AT[7]	NM_001400737.1:c.-353-1176AT[9]
SNRPN transcript variant 89	NM_001400738.1:c.-620-1176=	NM_001400738.1:c.-620-1176AT[3]	NM_001400738.1:c.-620-1176AT[4]	NM_001400738.1:c.-620-1176AT[6]	NM_001400738.1:c.-620-1176AT[7]	NM_001400738.1:c.-620-1176AT[9]
SNRPN transcript variant 90	NM_001400739.1:c.-767-1176=	NM_001400739.1:c.-767-1176AT[3]	NM_001400739.1:c.-767-1176AT[4]	NM_001400739.1:c.-767-1176AT[6]	NM_001400739.1:c.-767-1176AT[7]	NM_001400739.1:c.-767-1176AT[9]
SNRPN transcript variant 91	NM_001400740.1:c.-979-1176=	NM_001400740.1:c.-979-1176AT[3]	NM_001400740.1:c.-979-1176AT[4]	NM_001400740.1:c.-979-1176AT[6]	NM_001400740.1:c.-979-1176AT[7]	NM_001400740.1:c.-979-1176AT[9]
SNRPN transcript variant 92	NM_001400741.1:c.-504-1176=	NM_001400741.1:c.-504-1176AT[3]	NM_001400741.1:c.-504-1176AT[4]	NM_001400741.1:c.-504-1176AT[6]	NM_001400741.1:c.-504-1176AT[7]	NM_001400741.1:c.-504-1176AT[9]
SNRPN transcript variant 93	NM_001400742.1:c.-579-1176=	NM_001400742.1:c.-579-1176AT[3]	NM_001400742.1:c.-579-1176AT[4]	NM_001400742.1:c.-579-1176AT[6]	NM_001400742.1:c.-579-1176AT[7]	NM_001400742.1:c.-579-1176AT[9]
SNRPN transcript variant 94	NM_001400743.1:c.-635-1176=	NM_001400743.1:c.-635-1176AT[3]	NM_001400743.1:c.-635-1176AT[4]	NM_001400743.1:c.-635-1176AT[6]	NM_001400743.1:c.-635-1176AT[7]	NM_001400743.1:c.-635-1176AT[9]
SNRPN transcript variant 95	NM_001400744.1:c.-452-1176=	NM_001400744.1:c.-452-1176AT[3]	NM_001400744.1:c.-452-1176AT[4]	NM_001400744.1:c.-452-1176AT[6]	NM_001400744.1:c.-452-1176AT[7]	NM_001400744.1:c.-452-1176AT[9]
SNRPN transcript variant 96	NM_001400745.1:c.-504-1176=	NM_001400745.1:c.-504-1176AT[3]	NM_001400745.1:c.-504-1176AT[4]	NM_001400745.1:c.-504-1176AT[6]	NM_001400745.1:c.-504-1176AT[7]	NM_001400745.1:c.-504-1176AT[9]
SNRPN transcript variant 97	NM_001400746.1:c.-579-1176=	NM_001400746.1:c.-579-1176AT[3]	NM_001400746.1:c.-579-1176AT[4]	NM_001400746.1:c.-579-1176AT[6]	NM_001400746.1:c.-579-1176AT[7]	NM_001400746.1:c.-579-1176AT[9]
SNRPN transcript variant 98	NM_001400747.1:c.-544-1176=	NM_001400747.1:c.-544-1176AT[3]	NM_001400747.1:c.-544-1176AT[4]	NM_001400747.1:c.-544-1176AT[6]	NM_001400747.1:c.-544-1176AT[7]	NM_001400747.1:c.-544-1176AT[9]
SNRPN transcript variant 99	NM_001400748.1:c.-504-1176=	NM_001400748.1:c.-504-1176AT[3]	NM_001400748.1:c.-504-1176AT[4]	NM_001400748.1:c.-504-1176AT[6]	NM_001400748.1:c.-504-1176AT[7]	NM_001400748.1:c.-504-1176AT[9]
SNRPN transcript variant 100	NM_001400753.1:c.-840-1176=	NM_001400753.1:c.-840-1176AT[3]	NM_001400753.1:c.-840-1176AT[4]	NM_001400753.1:c.-840-1176AT[6]	NM_001400753.1:c.-840-1176AT[7]	NM_001400753.1:c.-840-1176AT[9]
SNRPN transcript variant 101	NM_001400754.1:c.-451-1176=	NM_001400754.1:c.-451-1176AT[3]	NM_001400754.1:c.-451-1176AT[4]	NM_001400754.1:c.-451-1176AT[6]	NM_001400754.1:c.-451-1176AT[7]	NM_001400754.1:c.-451-1176AT[9]
SNRPN transcript variant 102	NM_001400755.1:c.-767-1176=	NM_001400755.1:c.-767-1176AT[3]	NM_001400755.1:c.-767-1176AT[4]	NM_001400755.1:c.-767-1176AT[6]	NM_001400755.1:c.-767-1176AT[7]	NM_001400755.1:c.-767-1176AT[9]
SNRPN transcript variant 103	NM_001400756.1:c.-428-1176=	NM_001400756.1:c.-428-1176AT[3]	NM_001400756.1:c.-428-1176AT[4]	NM_001400756.1:c.-428-1176AT[6]	NM_001400756.1:c.-428-1176AT[7]	NM_001400756.1:c.-428-1176AT[9]
SNRPN transcript variant 104	NM_001400757.1:c.-751-1176=	NM_001400757.1:c.-751-1176AT[3]	NM_001400757.1:c.-751-1176AT[4]	NM_001400757.1:c.-751-1176AT[6]	NM_001400757.1:c.-751-1176AT[7]	NM_001400757.1:c.-751-1176AT[9]
SNRPN transcript variant 105	NM_001400758.1:c.-794-1176=	NM_001400758.1:c.-794-1176AT[3]	NM_001400758.1:c.-794-1176AT[4]	NM_001400758.1:c.-794-1176AT[6]	NM_001400758.1:c.-794-1176AT[7]	NM_001400758.1:c.-794-1176AT[9]
SNRPN transcript variant 106	NM_001400759.1:c.-414+32263=	NM_001400759.1:c.-414+32263AT[3]	NM_001400759.1:c.-414+32263AT[4]	NM_001400759.1:c.-414+32263AT[6]	NM_001400759.1:c.-414+32263AT[7]	NM_001400759.1:c.-414+32263AT[9]
SNRPN transcript variant 2	NM_022805.2:c.-504-1176=	NM_022805.2:c.-504-1176AT[3]	NM_022805.2:c.-504-1176AT[4]	NM_022805.2:c.-504-1176AT[6]	NM_022805.2:c.-504-1176AT[7]	NM_022805.2:c.-504-1176AT[9]
SNRPN transcript variant 2	NM_022805.5:c.-504-1176=	NM_022805.5:c.-504-1176AT[3]	NM_022805.5:c.-504-1176AT[4]	NM_022805.5:c.-504-1176AT[6]	NM_022805.5:c.-504-1176AT[7]	NM_022805.5:c.-504-1176AT[9]
SNRPN transcript variant 3	NM_022806.2:c.-504-1176=	NM_022806.2:c.-504-1176AT[3]	NM_022806.2:c.-504-1176AT[4]	NM_022806.2:c.-504-1176AT[6]	NM_022806.2:c.-504-1176AT[7]	NM_022806.2:c.-504-1176AT[9]
SNRPN transcript variant 3	NM_022806.5:c.-504-1176=	NM_022806.5:c.-504-1176AT[3]	NM_022806.5:c.-504-1176AT[4]	NM_022806.5:c.-504-1176AT[6]	NM_022806.5:c.-504-1176AT[7]	NM_022806.5:c.-504-1176AT[9]
SNRPN transcript variant 4	NM_022807.2:c.-504-1176=	NM_022807.2:c.-504-1176AT[3]	NM_022807.2:c.-504-1176AT[4]	NM_022807.2:c.-504-1176AT[6]	NM_022807.2:c.-504-1176AT[7]	NM_022807.2:c.-504-1176AT[9]
SNRPN transcript variant 4	NM_022807.5:c.-504-1176=	NM_022807.5:c.-504-1176AT[3]	NM_022807.5:c.-504-1176AT[4]	NM_022807.5:c.-504-1176AT[6]	NM_022807.5:c.-504-1176AT[7]	NM_022807.5:c.-504-1176AT[9]
SNRPN transcript variant 5	NM_022808.2:c.-504-1176=	NM_022808.2:c.-504-1176AT[3]	NM_022808.2:c.-504-1176AT[4]	NM_022808.2:c.-504-1176AT[6]	NM_022808.2:c.-504-1176AT[7]	NM_022808.2:c.-504-1176AT[9]
SNRPN transcript variant 5	NM_022808.5:c.-504-1176=	NM_022808.5:c.-504-1176AT[3]	NM_022808.5:c.-504-1176AT[4]	NM_022808.5:c.-504-1176AT[6]	NM_022808.5:c.-504-1176AT[7]	NM_022808.5:c.-504-1176AT[9]
SNRPN transcript variant X1	XM_005268263.1:c.-678-1176=	XM_005268263.1:c.-678-1176AT[3]	XM_005268263.1:c.-678-1176AT[4]	XM_005268263.1:c.-678-1176AT[6]	XM_005268263.1:c.-678-1176AT[7]	XM_005268263.1:c.-678-1176AT[9]
SNRPN transcript variant X2	XM_005268264.1:c.-504-1176=	XM_005268264.1:c.-504-1176AT[3]	XM_005268264.1:c.-504-1176AT[4]	XM_005268264.1:c.-504-1176AT[6]	XM_005268264.1:c.-504-1176AT[7]	XM_005268264.1:c.-504-1176AT[9]
SNRPN transcript variant X3	XM_005268265.1:c.-527-1176=	XM_005268265.1:c.-527-1176AT[3]	XM_005268265.1:c.-527-1176AT[4]	XM_005268265.1:c.-527-1176AT[6]	XM_005268265.1:c.-527-1176AT[7]	XM_005268265.1:c.-527-1176AT[9]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

5 SubSNP, 6 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GNOMAD	ss2932725109	Nov 08, 2017 (151)
2	TOMMO_GENOMICS	ss5215299143	Apr 27, 2021 (155)
3	TOMMO_GENOMICS	ss5215299144	Apr 27, 2021 (155)
4	TOMMO_GENOMICS	ss5768845342	Oct 16, 2022 (156)
5	TOMMO_GENOMICS	ss5768845343	Oct 16, 2022 (156)
6	gnomAD - Genomes	NC_000015.10 - 24918835	Apr 27, 2021 (155)
7	8.3KJPN Submission ignored due to conflicting rows: Row 73268450 (NC_000015.9:25163981::ATATATAT 2/16716) Row 73268451 (NC_000015.9:25163981:AT: 2/16716)	-	Apr 27, 2021 (155)
8	8.3KJPN Submission ignored due to conflicting rows: Row 73268450 (NC_000015.9:25163981::ATATATAT 2/16716) Row 73268451 (NC_000015.9:25163981:AT: 2/16716)	-	Apr 27, 2021 (155)
9	14KJPN Submission ignored due to conflicting rows: Row 102682446 (NC_000015.10:24918834::ATATATAT 2/28194) Row 102682447 (NC_000015.10:24918834:AT: 2/28194)	-	Oct 16, 2022 (156)
10	14KJPN Submission ignored due to conflicting rows: Row 102682446 (NC_000015.10:24918834::ATATATAT 2/28194) Row 102682447 (NC_000015.10:24918834:AT: 2/28194)	-	Oct 16, 2022 (156)
11	ALFA	NC_000015.10 - 24918835	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
12915077063	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATAT	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATAT	(self)
ss2932725109, ss5215299144	NC_000015.9:25163981:AT:	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATAT	(self)
463606435, ss5768845343	NC_000015.10:24918834:AT:	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATAT	(self)
12915077063	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATAT	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATAT	(self)
12915077063	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATAT	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATAT	(self)
12915077063	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATATAT	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATATAT	(self)
ss5215299143	NC_000015.9:25163981::ATATATAT	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATATATATAT	(self)
ss5768845342	NC_000015.10:24918834::ATATATAT	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATATATATAT
12915077063	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATATATATAT	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATATATATAT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3222635692	NC_000015.10:24918834::AT	NC_000015.10:24918834:ATATATATAT:A… NC_000015.10:24918834:ATATATATAT:ATATATATATAT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1397795516

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1397795516