Name: rs143688572
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs143688572

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:37845264-37845282 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(GT)₃ / delGTGT / delGT / dupGT…
del(GT)₃ / delGTGT / delGT / dupGT / dupGTGT / dup(GT)₃ / dup(GT)₄ / dup(GT)₅
Variation Type: Indel Insertion and Deletion
Frequency: dupGTGT=0.03442 (476/13828, ALFA)
dupGTGT=0.1172 (587/5008, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: GDNF-AS1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	13828	TGTGTGTGTGTGTGTGTGT=0.93267	TGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGT=0.00007, TGTGTGTGTGTGTGTGTGTGT=0.01034, TGTGTGTGTGTGTGTGTGTGTGT=0.03442, TGTGTGTGTGTGTGTGTGTGTGTGT=0.02242, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00007, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000	0.936603	0.004319	0.059078	32
European	Sub	11404	TGTGTGTGTGTGTGTGTGT=0.91836	TGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGT=0.00000, TGTGTGTGTGTGTGTGT=0.00009, TGTGTGTGTGTGTGTGTGTGT=0.01254, TGTGTGTGTGTGTGTGTGTGTGT=0.04174, TGTGTGTGTGTGTGTGTGTGTGTGT=0.02718, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00009, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000	0.922026	0.005312	0.072662	23
African	Sub	1458	TGTGTGTGTGTGTGTGTGT=1.0000	TGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	56	TGTGTGTGTGTGTGTGTGT=1.00	TGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
African American	Sub	1402	TGTGTGTGTGTGTGTGTGT=1.0000	TGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	92	TGTGTGTGTGTGTGTGTGT=1.00	TGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	72	TGTGTGTGTGTGTGTGTGT=1.00	TGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	20	TGTGTGTGTGTGTGTGTGT=1.00	TGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	114	TGTGTGTGTGTGTGTGTGT=1.000	TGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	382	TGTGTGTGTGTGTGTGTGT=1.000	TGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	62	TGTGTGTGTGTGTGTGTGT=1.00	TGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
Other	Sub	316	TGTGTGTGTGTGTGTGTGT=1.000	TGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, TGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	13828	(TG)₉T=0.93267	del(GT)₃=0.00000, delGTGT=0.00000, delGT=0.00007, dupGT=0.01034, dupGTGT=0.03442, dup(GT)₃=0.02242, dup(GT)₄=0.00007, dup(GT)₅=0.00000
Allele Frequency Aggregator	European	Sub	11404	(TG)₉T=0.91836	del(GT)₃=0.00000, delGTGT=0.00000, delGT=0.00009, dupGT=0.01254, dupGTGT=0.04174, dup(GT)₃=0.02718, dup(GT)₄=0.00009, dup(GT)₅=0.00000
Allele Frequency Aggregator	African	Sub	1458	(TG)₉T=1.0000	del(GT)₃=0.0000, delGTGT=0.0000, delGT=0.0000, dupGT=0.0000, dupGTGT=0.0000, dup(GT)₃=0.0000, dup(GT)₄=0.0000, dup(GT)₅=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	382	(TG)₉T=1.000	del(GT)₃=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)₃=0.000, dup(GT)₄=0.000, dup(GT)₅=0.000
Allele Frequency Aggregator	Other	Sub	316	(TG)₉T=1.000	del(GT)₃=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)₃=0.000, dup(GT)₄=0.000, dup(GT)₅=0.000
Allele Frequency Aggregator	Latin American 1	Sub	114	(TG)₉T=1.000	del(GT)₃=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)₃=0.000, dup(GT)₄=0.000, dup(GT)₅=0.000
Allele Frequency Aggregator	Asian	Sub	92	(TG)₉T=1.00	del(GT)₃=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)₃=0.00, dup(GT)₄=0.00, dup(GT)₅=0.00
Allele Frequency Aggregator	South Asian	Sub	62	(TG)₉T=1.00	del(GT)₃=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)₃=0.00, dup(GT)₄=0.00, dup(GT)₅=0.00
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupGT=0.0767, dupGTGT=0.1172, dup(GT)₃=0.0411
1000Genomes	African	Sub	1322	- No frequency provided	dupGT=0.2020, dupGTGT=0.1346, dup(GT)₃=0.0068
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupGT=0.0238, dupGTGT=0.0466, dup(GT)₃=0.0010
1000Genomes	Europe	Sub	1006	- No frequency provided	dupGT=0.0427, dupGTGT=0.0865, dup(GT)₃=0.1024
1000Genomes	South Asian	Sub	978	- No frequency provided	dupGT=0.029, dupGTGT=0.181, dup(GT)₃=0.061
1000Genomes	American	Sub	694	- No frequency provided	dupGT=0.032, dupGTGT=0.141, dup(GT)₃=0.048

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.37845265GT[6]
GRCh38.p14 chr 5	NC_000005.10:g.37845265GT[7]
GRCh38.p14 chr 5	NC_000005.10:g.37845265GT[8]
GRCh38.p14 chr 5	NC_000005.10:g.37845265GT[10]
GRCh38.p14 chr 5	NC_000005.10:g.37845265GT[11]
GRCh38.p14 chr 5	NC_000005.10:g.37845265GT[12]
GRCh38.p14 chr 5	NC_000005.10:g.37845265GT[13]
GRCh38.p14 chr 5	NC_000005.10:g.37845265GT[14]
GRCh37.p13 chr 5	NC_000005.9:g.37845367GT[6]
GRCh37.p13 chr 5	NC_000005.9:g.37845367GT[7]
GRCh37.p13 chr 5	NC_000005.9:g.37845367GT[8]
GRCh37.p13 chr 5	NC_000005.9:g.37845367GT[10]
GRCh37.p13 chr 5	NC_000005.9:g.37845367GT[11]
GRCh37.p13 chr 5	NC_000005.9:g.37845367GT[12]
GRCh37.p13 chr 5	NC_000005.9:g.37845367GT[13]
GRCh37.p13 chr 5	NC_000005.9:g.37845367GT[14]

Gene: GDNF-AS1, GDNF antisense RNA 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
GDNF-AS1 transcript variant 1	NR_103441.2:n.	N/A	Intron Variant
GDNF-AS1 transcript variant 4	NR_145476.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(TG)₉T=	del(GT)₃	delGTGT	delGT	dupGT	dupGTGT	dup(GT)₃	dup(GT)₄	dup(GT)₅
GRCh38.p14 chr 5	NC_000005.10:g.37845264_37845282=	NC_000005.10:g.37845265GT[6]	NC_000005.10:g.37845265GT[7]	NC_000005.10:g.37845265GT[8]	NC_000005.10:g.37845265GT[10]	NC_000005.10:g.37845265GT[11]	NC_000005.10:g.37845265GT[12]	NC_000005.10:g.37845265GT[13]	NC_000005.10:g.37845265GT[14]
GRCh37.p13 chr 5	NC_000005.9:g.37845366_37845384=	NC_000005.9:g.37845367GT[6]	NC_000005.9:g.37845367GT[7]	NC_000005.9:g.37845367GT[8]	NC_000005.9:g.37845367GT[10]	NC_000005.9:g.37845367GT[11]	NC_000005.9:g.37845367GT[12]	NC_000005.9:g.37845367GT[13]	NC_000005.9:g.37845367GT[14]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

61 SubSNP, 28 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	BCMHGSC_JDW	ss103887784	Dec 06, 2013 (138)
2	BL	ss256046075	May 09, 2011 (134)
3	GMI	ss288625456	Oct 12, 2018 (152)
4	1000GENOMES	ss326658649	May 09, 2011 (134)
5	1000GENOMES	ss326697625	May 09, 2011 (136)
6	1000GENOMES	ss326903848	May 09, 2011 (136)
7	LUNTER	ss551489950	Apr 25, 2013 (138)
8	SSMP	ss663601654	Apr 01, 2015 (144)
9	1000GENOMES	ss1373681896	Aug 21, 2014 (142)
10	1000GENOMES	ss1373681898	Aug 21, 2014 (142)
11	1000GENOMES	ss1373681900	Aug 21, 2014 (142)
12	EVA_UK10K_TWINSUK	ss1704636007	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1704636008	Apr 01, 2015 (144)
14	EVA_UK10K_ALSPAC	ss1704639622	Apr 01, 2015 (144)
15	EVA_UK10K_ALSPAC	ss1704639624	Apr 01, 2015 (144)
16	HAMMER_LAB	ss1803377402	Sep 08, 2015 (146)
17	SWEGEN	ss2996758494	Jan 10, 2018 (151)
18	MCHAISSO	ss3064153813	Nov 08, 2017 (151)
19	EVA_DECODE	ss3714491474	Jul 13, 2019 (153)
20	EVA_DECODE	ss3714491475	Jul 13, 2019 (153)
21	EVA_DECODE	ss3714491476	Jul 13, 2019 (153)
22	EVA_DECODE	ss3714491477	Jul 13, 2019 (153)
23	EVA_DECODE	ss3714491478	Jul 13, 2019 (153)
24	ACPOP	ss3732267735	Jul 13, 2019 (153)
25	ACPOP	ss3732267736	Jul 13, 2019 (153)
26	ACPOP	ss3732267737	Jul 13, 2019 (153)
27	PACBIO	ss3785085658	Jul 13, 2019 (153)
28	PACBIO	ss3790496039	Jul 13, 2019 (153)
29	PACBIO	ss3795372479	Jul 13, 2019 (153)
30	KHV_HUMAN_GENOMES	ss3806484039	Jul 13, 2019 (153)
31	KHV_HUMAN_GENOMES	ss3806484040	Jul 13, 2019 (153)
32	KHV_HUMAN_GENOMES	ss3806484041	Jul 13, 2019 (153)
33	EVA	ss3829198643	Apr 26, 2020 (154)
34	KOGIC	ss3956452842	Apr 26, 2020 (154)
35	KOGIC	ss3956452843	Apr 26, 2020 (154)
36	KOGIC	ss3956452844	Apr 26, 2020 (154)
37	GNOMAD	ss4102682993	Apr 26, 2021 (155)
38	GNOMAD	ss4102682994	Apr 26, 2021 (155)
39	GNOMAD	ss4102682995	Apr 26, 2021 (155)
40	GNOMAD	ss4102682996	Apr 26, 2021 (155)
41	GNOMAD	ss4102682998	Apr 26, 2021 (155)
42	GNOMAD	ss4102682999	Apr 26, 2021 (155)
43	TOMMO_GENOMICS	ss5171271442	Apr 26, 2021 (155)
44	TOMMO_GENOMICS	ss5171271443	Apr 26, 2021 (155)
45	TOMMO_GENOMICS	ss5171271444	Apr 26, 2021 (155)
46	TOMMO_GENOMICS	ss5171271445	Apr 26, 2021 (155)
47	1000G_HIGH_COVERAGE	ss5263579501	Oct 13, 2022 (156)
48	1000G_HIGH_COVERAGE	ss5263579502	Oct 13, 2022 (156)
49	1000G_HIGH_COVERAGE	ss5263579503	Oct 13, 2022 (156)
50	1000G_HIGH_COVERAGE	ss5263579504	Oct 13, 2022 (156)
51	HUGCELL_USP	ss5461844361	Oct 13, 2022 (156)
52	HUGCELL_USP	ss5461844362	Oct 13, 2022 (156)
53	HUGCELL_USP	ss5461844363	Oct 13, 2022 (156)
54	HUGCELL_USP	ss5461844364	Oct 13, 2022 (156)
55	TOMMO_GENOMICS	ss5707188999	Oct 13, 2022 (156)
56	TOMMO_GENOMICS	ss5707189000	Oct 13, 2022 (156)
57	TOMMO_GENOMICS	ss5707189001	Oct 13, 2022 (156)
58	TOMMO_GENOMICS	ss5707189002	Oct 13, 2022 (156)
59	EVA	ss5834793479	Oct 13, 2022 (156)
60	EVA	ss5834793480	Oct 13, 2022 (156)
61	EVA	ss5854772412	Oct 13, 2022 (156)
62	1000Genomes	NC_000005.9 - 37845366	Oct 12, 2018 (152)
63	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 14611715 (NC_000005.9:37845365::TGTG 392/3854) Row 14611716 (NC_000005.9:37845365::TG 206/3854)	-	Oct 12, 2018 (152)
64	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 14611715 (NC_000005.9:37845365::TGTG 392/3854) Row 14611716 (NC_000005.9:37845365::TG 206/3854)	-	Oct 12, 2018 (152)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 185622143 (NC_000005.10:37845263::TG 10531/138650) Row 185622144 (NC_000005.10:37845263::TGTG 13792/138664) Row 185622145 (NC_000005.10:37845263::TGTGTG 8654/138688)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 185622143 (NC_000005.10:37845263::TG 10531/138650) Row 185622144 (NC_000005.10:37845263::TGTG 13792/138664) Row 185622145 (NC_000005.10:37845263::TGTGTG 8654/138688)...	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 185622143 (NC_000005.10:37845263::TG 10531/138650) Row 185622144 (NC_000005.10:37845263::TGTG 13792/138664) Row 185622145 (NC_000005.10:37845263::TGTGTG 8654/138688)...	-	Apr 26, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 185622143 (NC_000005.10:37845263::TG 10531/138650) Row 185622144 (NC_000005.10:37845263::TGTG 13792/138664) Row 185622145 (NC_000005.10:37845263::TGTGTG 8654/138688)...	-	Apr 26, 2021 (155)
69	gnomAD - Genomes Submission ignored due to conflicting rows: Row 185622143 (NC_000005.10:37845263::TG 10531/138650) Row 185622144 (NC_000005.10:37845263::TGTG 13792/138664) Row 185622145 (NC_000005.10:37845263::TGTGTG 8654/138688)...	-	Apr 26, 2021 (155)
70	gnomAD - Genomes Submission ignored due to conflicting rows: Row 185622143 (NC_000005.10:37845263::TG 10531/138650) Row 185622144 (NC_000005.10:37845263::TGTG 13792/138664) Row 185622145 (NC_000005.10:37845263::TGTGTG 8654/138688)...	-	Apr 26, 2021 (155)
71	Korean Genome Project Submission ignored due to conflicting rows: Row 12830843 (NC_000005.10:37845263:TG: 22/1832) Row 12830844 (NC_000005.10:37845265::TG 71/1832) Row 12830845 (NC_000005.10:37845265::TGTG 84/1832)	-	Apr 26, 2020 (154)
72	Korean Genome Project Submission ignored due to conflicting rows: Row 12830843 (NC_000005.10:37845263:TG: 22/1832) Row 12830844 (NC_000005.10:37845265::TG 71/1832) Row 12830845 (NC_000005.10:37845265::TGTG 84/1832)	-	Apr 26, 2020 (154)
73	Korean Genome Project Submission ignored due to conflicting rows: Row 12830843 (NC_000005.10:37845263:TG: 22/1832) Row 12830844 (NC_000005.10:37845265::TG 71/1832) Row 12830845 (NC_000005.10:37845265::TGTG 84/1832)	-	Apr 26, 2020 (154)
74	Northern Sweden Submission ignored due to conflicting rows: Row 5552600 (NC_000005.9:37845365::TGTG 47/600) Row 5552601 (NC_000005.9:37845365::TGTGTG 42/600) Row 5552602 (NC_000005.9:37845365::TG 17/600)	-	Jul 13, 2019 (153)
75	Northern Sweden Submission ignored due to conflicting rows: Row 5552600 (NC_000005.9:37845365::TGTG 47/600) Row 5552601 (NC_000005.9:37845365::TGTGTG 42/600) Row 5552602 (NC_000005.9:37845365::TG 17/600)	-	Jul 13, 2019 (153)
76	Northern Sweden Submission ignored due to conflicting rows: Row 5552600 (NC_000005.9:37845365::TGTG 47/600) Row 5552601 (NC_000005.9:37845365::TGTGTG 42/600) Row 5552602 (NC_000005.9:37845365::TG 17/600)	-	Jul 13, 2019 (153)
77	8.3KJPN Submission ignored due to conflicting rows: Row 29240749 (NC_000005.9:37845365::TGTG 767/16760) Row 29240750 (NC_000005.9:37845365::TG 538/16760) Row 29240751 (NC_000005.9:37845365:TG: 10/16760)...	-	Apr 26, 2021 (155)
78	8.3KJPN Submission ignored due to conflicting rows: Row 29240749 (NC_000005.9:37845365::TGTG 767/16760) Row 29240750 (NC_000005.9:37845365::TG 538/16760) Row 29240751 (NC_000005.9:37845365:TG: 10/16760)...	-	Apr 26, 2021 (155)
79	8.3KJPN Submission ignored due to conflicting rows: Row 29240749 (NC_000005.9:37845365::TGTG 767/16760) Row 29240750 (NC_000005.9:37845365::TG 538/16760) Row 29240751 (NC_000005.9:37845365:TG: 10/16760)...	-	Apr 26, 2021 (155)
80	8.3KJPN Submission ignored due to conflicting rows: Row 29240749 (NC_000005.9:37845365::TGTG 767/16760) Row 29240750 (NC_000005.9:37845365::TG 538/16760) Row 29240751 (NC_000005.9:37845365:TG: 10/16760)...	-	Apr 26, 2021 (155)
81	14KJPN Submission ignored due to conflicting rows: Row 41026103 (NC_000005.10:37845263::TGTG 1205/28258) Row 41026104 (NC_000005.10:37845263::TG 896/28258) Row 41026105 (NC_000005.10:37845263::TGTGTG 5/28258)...	-	Oct 13, 2022 (156)
82	14KJPN Submission ignored due to conflicting rows: Row 41026103 (NC_000005.10:37845263::TGTG 1205/28258) Row 41026104 (NC_000005.10:37845263::TG 896/28258) Row 41026105 (NC_000005.10:37845263::TGTGTG 5/28258)...	-	Oct 13, 2022 (156)
83	14KJPN Submission ignored due to conflicting rows: Row 41026103 (NC_000005.10:37845263::TGTG 1205/28258) Row 41026104 (NC_000005.10:37845263::TG 896/28258) Row 41026105 (NC_000005.10:37845263::TGTGTG 5/28258)...	-	Oct 13, 2022 (156)
84	14KJPN Submission ignored due to conflicting rows: Row 41026103 (NC_000005.10:37845263::TGTG 1205/28258) Row 41026104 (NC_000005.10:37845263::TG 896/28258) Row 41026105 (NC_000005.10:37845263::TGTGTG 5/28258)...	-	Oct 13, 2022 (156)
85	UK 10K study - Twins Submission ignored due to conflicting rows: Row 14611715 (NC_000005.9:37845365::TGTG 438/3708) Row 14611716 (NC_000005.9:37845365::TG 213/3708)	-	Oct 12, 2018 (152)
86	UK 10K study - Twins Submission ignored due to conflicting rows: Row 14611715 (NC_000005.9:37845365::TGTG 438/3708) Row 14611716 (NC_000005.9:37845365::TG 213/3708)	-	Oct 12, 2018 (152)
87	A Vietnamese Genetic Variation Database Submission ignored due to conflicting rows: Row 3248321 (NC_000005.9:37845365::TG 3/202) Row 3248322 (NC_000005.9:37845365::TGTG 8/207)	-	Jul 13, 2019 (153)
88	A Vietnamese Genetic Variation Database Submission ignored due to conflicting rows: Row 3248321 (NC_000005.9:37845365::TG 3/202) Row 3248322 (NC_000005.9:37845365::TGTG 8/207)	-	Jul 13, 2019 (153)
89	ALFA	NC_000005.10 - 37845264	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs143823929	Oct 19, 2011 (136)
rs144237400	Oct 19, 2011 (136)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
10741130037	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGT	(self)
ss4102682999	NC_000005.10:37845263:TGTG:	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT	(self)
10741130037	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT	(self)
ss2996758494, ss5171271444	NC_000005.9:37845365:TG:	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT	(self)
ss3714491474, ss3956452842, ss4102682998, ss5263579504, ss5461844362, ss5707189002	NC_000005.10:37845263:TG:	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT	(self)
10741130037	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT	(self)
ss326903848	NC_000005.8:37881122::TG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT	(self)
ss288625456	NC_000005.8:37881141::GT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT	(self)
26274758, ss1373681896, ss1704636008, ss1704639624, ss1803377402, ss3732267737, ss3785085658, ss3790496039, ss3795372479, ss5171271443, ss5834793480	NC_000005.9:37845365::TG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT	(self)
ss3806484040, ss4102682993, ss5263579502, ss5461844363, ss5707189000	NC_000005.10:37845263::TG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT	(self)
10741130037	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT	(self)
ss3714491475, ss3956452843	NC_000005.10:37845265::TG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT	(self)
ss256046075, ss326658649, ss551489950	NC_000005.8:37881122::TGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT	(self)
26274758, ss663601654, ss1373681898, ss1704636007, ss1704639622, ss3732267735, ss3829198643, ss5171271442	NC_000005.9:37845365::TGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT	(self)
ss3064153813, ss3806484041, ss4102682994, ss5263579501, ss5461844364, ss5707188999, ss5854772412	NC_000005.10:37845263::TGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT	(self)
10741130037	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT	(self)
ss3714491476, ss3956452844	NC_000005.10:37845265::TGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT	(self)
ss326697625	NC_000005.8:37881122::TGTGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT	(self)
26274758, ss1373681900, ss3732267736, ss5171271445, ss5834793479	NC_000005.9:37845365::TGTGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss3806484039, ss4102682995, ss5263579503, ss5461844361, ss5707189001	NC_000005.10:37845263::TGTGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT	(self)
10741130037	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss3714491477	NC_000005.10:37845265::TGTGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss103887784	NT_006576.16:37835384::GTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss4102682996	NC_000005.10:37845263::TGTGTGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
10741130037	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss3714491478	NC_000005.10:37845265::TGTGTGTG	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
10741130037	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	NC_000005.10:37845263:TGTGTGTGTGTG… NC_000005.10:37845263:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs143688572

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs143688572