Name: rs146988397
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs146988397

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr16:27271550-27271560 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delGC / dupGC / dupGCGC / dup(GC)₃…
delGC / dupGC / dupGCGC / dup(GC)₃ / dup(GC)₄ / dup(GC)₅ / ins(GC)₆
Variation Type: Indel Insertion and Deletion
Frequency: dup(GC)₃=0.02455 (335/13644, ALFA)
dup(GC)₃=0.0759 (332/4374, Estonian)
dup(GC)₃=0.12 (5/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: NSMCE1-DT : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	13644	CGCGCGCGCGC=0.97186	CGCGCGCGC=0.00000, CGCGCGCGCGCGC=0.00000, CGCGCGCGCGCGCGC=0.00000, CGCGCGCGCGCGCGCGC=0.02455, CGCGCGCGCGCGCGCGCGC=0.00359, CGCGCGCGCGCGCGCGCGCGC=0.00000, CGCGCGCGCGCGCGCGCGCGCGC=0.00000	0.952606	0.001772	0.045622	9
European	Sub	10594	CGCGCGCGCGC=0.96385	CGCGCGCGC=0.00000, CGCGCGCGCGCGC=0.00000, CGCGCGCGCGCGCGC=0.00000, CGCGCGCGCGCGCGCGC=0.03153, CGCGCGCGCGCGCGCGCGC=0.00463, CGCGCGCGCGCGCGCGCGCGC=0.00000, CGCGCGCGCGCGCGCGCGCGCGC=0.00000	0.939024	0.002287	0.058689	6
African	Sub	1858	CGCGCGCGCGC=1.0000	CGCGCGCGC=0.0000, CGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGCGCGCGCGC=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	68	CGCGCGCGCGC=1.00	CGCGCGCGC=0.00, CGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGCGC=0.00	1.0	0.0	0.0	N/A
African American	Sub	1790	CGCGCGCGCGC=1.0000	CGCGCGCGC=0.0000, CGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGCGCGCGC=0.0000, CGCGCGCGCGCGCGCGCGCGCGC=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	86	CGCGCGCGCGC=1.00	CGCGCGCGC=0.00, CGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGCGC=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	64	CGCGCGCGCGC=1.00	CGCGCGCGC=0.00, CGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGCGC=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	22	CGCGCGCGCGC=1.00	CGCGCGCGC=0.00, CGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGCGC=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	112	CGCGCGCGCGC=1.000	CGCGCGCGC=0.000, CGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGCGCGCGC=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	532	CGCGCGCGCGC=1.000	CGCGCGCGC=0.000, CGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGCGCGCGC=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	74	CGCGCGCGCGC=1.00	CGCGCGCGC=0.00, CGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGC=0.00, CGCGCGCGCGCGCGCGCGCGCGC=0.00	1.0	0.0	0.0	N/A
Other	Sub	388	CGCGCGCGCGC=0.997	CGCGCGCGC=0.000, CGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGC=0.003, CGCGCGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGCGCGC=0.000, CGCGCGCGCGCGCGCGCGCGCGC=0.000	0.994845	0.0	0.005155	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	13644	(CG)₅C=0.97186	delGC=0.00000, dupGC=0.00000, dupGCGC=0.00000, dup(GC)₃=0.02455, dup(GC)₄=0.00359, dup(GC)₅=0.00000, ins(GC)₆=0.00000
Allele Frequency Aggregator	European	Sub	10594	(CG)₅C=0.96385	delGC=0.00000, dupGC=0.00000, dupGCGC=0.00000, dup(GC)₃=0.03153, dup(GC)₄=0.00463, dup(GC)₅=0.00000, ins(GC)₆=0.00000
Allele Frequency Aggregator	African	Sub	1858	(CG)₅C=1.0000	delGC=0.0000, dupGC=0.0000, dupGCGC=0.0000, dup(GC)₃=0.0000, dup(GC)₄=0.0000, dup(GC)₅=0.0000, ins(GC)₆=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	532	(CG)₅C=1.000	delGC=0.000, dupGC=0.000, dupGCGC=0.000, dup(GC)₃=0.000, dup(GC)₄=0.000, dup(GC)₅=0.000, ins(GC)₆=0.000
Allele Frequency Aggregator	Other	Sub	388	(CG)₅C=0.997	delGC=0.000, dupGC=0.000, dupGCGC=0.000, dup(GC)₃=0.003, dup(GC)₄=0.000, dup(GC)₅=0.000, ins(GC)₆=0.000
Allele Frequency Aggregator	Latin American 1	Sub	112	(CG)₅C=1.000	delGC=0.000, dupGC=0.000, dupGCGC=0.000, dup(GC)₃=0.000, dup(GC)₄=0.000, dup(GC)₅=0.000, ins(GC)₆=0.000
Allele Frequency Aggregator	Asian	Sub	86	(CG)₅C=1.00	delGC=0.00, dupGC=0.00, dupGCGC=0.00, dup(GC)₃=0.00, dup(GC)₄=0.00, dup(GC)₅=0.00, ins(GC)₆=0.00
Allele Frequency Aggregator	South Asian	Sub	74	(CG)₅C=1.00	delGC=0.00, dupGC=0.00, dupGCGC=0.00, dup(GC)₃=0.00, dup(GC)₄=0.00, dup(GC)₅=0.00, ins(GC)₆=0.00
Genetic variation in the Estonian population	Estonian	Study-wide	4374	- No frequency provided	dup(GC)₃=0.0759
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dup(GC)₃=0.12

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 16	NC_000016.10:g.27271551GC[4]
GRCh38.p14 chr 16	NC_000016.10:g.27271551GC[6]
GRCh38.p14 chr 16	NC_000016.10:g.27271551GC[7]
GRCh38.p14 chr 16	NC_000016.10:g.27271551GC[8]
GRCh38.p14 chr 16	NC_000016.10:g.27271551GC[9]
GRCh38.p14 chr 16	NC_000016.10:g.27271551GC[10]
GRCh38.p14 chr 16	NC_000016.10:g.27271551GC[11]
GRCh37.p13 chr 16	NC_000016.9:g.27282872GC[4]
GRCh37.p13 chr 16	NC_000016.9:g.27282872GC[6]
GRCh37.p13 chr 16	NC_000016.9:g.27282872GC[7]
GRCh37.p13 chr 16	NC_000016.9:g.27282872GC[8]
GRCh37.p13 chr 16	NC_000016.9:g.27282872GC[9]
GRCh37.p13 chr 16	NC_000016.9:g.27282872GC[10]
GRCh37.p13 chr 16	NC_000016.9:g.27282872GC[11]

Gene: NSMCE1-DT, NSMCE1 divergent transcript (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
NSMCE1-DT transcript	NR_037184.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(CG)₅C=	delGC	dupGC	dupGCGC	dup(GC)₃	dup(GC)₄	dup(GC)₅	ins(GC)₆
GRCh38.p14 chr 16	NC_000016.10:g.27271550_27271560=	NC_000016.10:g.27271551GC[4]	NC_000016.10:g.27271551GC[6]	NC_000016.10:g.27271551GC[7]	NC_000016.10:g.27271551GC[8]	NC_000016.10:g.27271551GC[9]	NC_000016.10:g.27271551GC[10]	NC_000016.10:g.27271551GC[11]
GRCh37.p13 chr 16	NC_000016.9:g.27282871_27282881=	NC_000016.9:g.27282872GC[4]	NC_000016.9:g.27282872GC[6]	NC_000016.9:g.27282872GC[7]	NC_000016.9:g.27282872GC[8]	NC_000016.9:g.27282872GC[9]	NC_000016.9:g.27282872GC[10]	NC_000016.9:g.27282872GC[11]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

55 SubSNP, 28 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	1000GENOMES	ss327725893	May 09, 2011 (134)
2	1000GENOMES	ss327846721	May 09, 2011 (134)
3	1000GENOMES	ss328190882	May 09, 2011 (134)
4	LUNTER	ss552803758	Apr 25, 2013 (138)
5	LUNTER	ss553595050	Apr 25, 2013 (138)
6	BILGI_BIOE	ss666667902	Apr 25, 2013 (138)
7	EVA_GENOME_DK	ss1574944883	Apr 01, 2015 (144)
8	EVA_UK10K_ALSPAC	ss1708514495	Apr 01, 2015 (144)
9	EVA_UK10K_ALSPAC	ss1708514497	Apr 01, 2015 (144)
10	EVA_UK10K_TWINSUK	ss1708514817	Apr 01, 2015 (144)
11	EVA_UK10K_TWINSUK	ss1708514821	Apr 01, 2015 (144)
12	JJLAB	ss2031299615	Sep 14, 2016 (149)
13	SWEGEN	ss3014292078	Nov 08, 2017 (151)
14	SWEGEN	ss3014292079	Nov 08, 2017 (151)
15	SWEGEN	ss3014292080	Nov 08, 2017 (151)
16	MCHAISSO	ss3063842415	Nov 08, 2017 (151)
17	MCHAISSO	ss3065617154	Nov 08, 2017 (151)
18	EGCUT_WGS	ss3681379497	Jul 13, 2019 (153)
19	EVA_DECODE	ss3699093080	Jul 13, 2019 (153)
20	EVA_DECODE	ss3699093081	Jul 13, 2019 (153)
21	EVA_DECODE	ss3699093082	Jul 13, 2019 (153)
22	EVA_DECODE	ss3699093083	Jul 13, 2019 (153)
23	EVA_DECODE	ss3699093084	Jul 13, 2019 (153)
24	ACPOP	ss3741448460	Jul 13, 2019 (153)
25	ACPOP	ss3741448461	Jul 13, 2019 (153)
26	EVA	ss3834538417	Apr 27, 2020 (154)
27	EVA	ss3846367340	Apr 27, 2020 (154)
28	KOGIC	ss3977350567	Apr 27, 2020 (154)
29	KOGIC	ss3977350568	Apr 27, 2020 (154)
30	KOGIC	ss3977350569	Apr 27, 2020 (154)
31	GNOMAD	ss4299090710	Apr 27, 2021 (155)
32	GNOMAD	ss4299090711	Apr 27, 2021 (155)
33	GNOMAD	ss4299090712	Apr 27, 2021 (155)
34	GNOMAD	ss4299090713	Apr 27, 2021 (155)
35	GNOMAD	ss4299090714	Apr 27, 2021 (155)
36	GNOMAD	ss4299090715	Apr 27, 2021 (155)
37	GNOMAD	ss4299090719	Apr 27, 2021 (155)
38	TOMMO_GENOMICS	ss5219058583	Apr 27, 2021 (155)
39	TOMMO_GENOMICS	ss5219058584	Apr 27, 2021 (155)
40	TOMMO_GENOMICS	ss5219058585	Apr 27, 2021 (155)
41	TOMMO_GENOMICS	ss5219058586	Apr 27, 2021 (155)
42	1000G_HIGH_COVERAGE	ss5300601668	Oct 16, 2022 (156)
43	1000G_HIGH_COVERAGE	ss5300601669	Oct 16, 2022 (156)
44	1000G_HIGH_COVERAGE	ss5300601670	Oct 16, 2022 (156)
45	1000G_HIGH_COVERAGE	ss5300601671	Oct 16, 2022 (156)
46	HUGCELL_USP	ss5494048732	Oct 16, 2022 (156)
47	HUGCELL_USP	ss5494048733	Oct 16, 2022 (156)
48	HUGCELL_USP	ss5494048734	Oct 16, 2022 (156)
49	HUGCELL_USP	ss5494048735	Oct 16, 2022 (156)
50	TOMMO_GENOMICS	ss5773722627	Oct 16, 2022 (156)
51	TOMMO_GENOMICS	ss5773722628	Oct 16, 2022 (156)
52	TOMMO_GENOMICS	ss5773722629	Oct 16, 2022 (156)
53	TOMMO_GENOMICS	ss5773722630	Oct 16, 2022 (156)
54	TOMMO_GENOMICS	ss5773722631	Oct 16, 2022 (156)
55	EVA	ss5851542857	Oct 16, 2022 (156)
56	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 38327407 (NC_000016.9:27282870::CGCGCG 946/3854) Row 38327408 (NC_000016.9:27282870::CGCGCGCG 418/3854)	-	Oct 12, 2018 (152)
57	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 38327407 (NC_000016.9:27282870::CGCGCG 946/3854) Row 38327408 (NC_000016.9:27282870::CGCGCGCG 418/3854)	-	Oct 12, 2018 (152)
58	Genetic variation in the Estonian population	NC_000016.9 - 27282871	Oct 12, 2018 (152)
59	The Danish reference pan genome	NC_000016.9 - 27282871	Apr 27, 2020 (154)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 486576394 (NC_000016.10:27271549::CG 29/125042) Row 486576395 (NC_000016.10:27271549::CGCG 211/125016) Row 486576396 (NC_000016.10:27271549::CGCGCG 15561/124606)...	-	Apr 27, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 486576394 (NC_000016.10:27271549::CG 29/125042) Row 486576395 (NC_000016.10:27271549::CGCG 211/125016) Row 486576396 (NC_000016.10:27271549::CGCGCG 15561/124606)...	-	Apr 27, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 486576394 (NC_000016.10:27271549::CG 29/125042) Row 486576395 (NC_000016.10:27271549::CGCG 211/125016) Row 486576396 (NC_000016.10:27271549::CGCGCG 15561/124606)...	-	Apr 27, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 486576394 (NC_000016.10:27271549::CG 29/125042) Row 486576395 (NC_000016.10:27271549::CGCG 211/125016) Row 486576396 (NC_000016.10:27271549::CGCGCG 15561/124606)...	-	Apr 27, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 486576394 (NC_000016.10:27271549::CG 29/125042) Row 486576395 (NC_000016.10:27271549::CGCG 211/125016) Row 486576396 (NC_000016.10:27271549::CGCGCG 15561/124606)...	-	Apr 27, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 486576394 (NC_000016.10:27271549::CG 29/125042) Row 486576395 (NC_000016.10:27271549::CGCG 211/125016) Row 486576396 (NC_000016.10:27271549::CGCGCG 15561/124606)...	-	Apr 27, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 486576394 (NC_000016.10:27271549::CG 29/125042) Row 486576395 (NC_000016.10:27271549::CGCG 211/125016) Row 486576396 (NC_000016.10:27271549::CGCGCG 15561/124606)...	-	Apr 27, 2021 (155)
67	Korean Genome Project Submission ignored due to conflicting rows: Row 33728568 (NC_000016.10:27271549::CGCGCG 157/1832) Row 33728569 (NC_000016.10:27271549::CGCGCGCG 4/1832) Row 33728570 (NC_000016.10:27271549::CGCGCGCGCG 1/1832)	-	Apr 27, 2020 (154)
68	Korean Genome Project Submission ignored due to conflicting rows: Row 33728568 (NC_000016.10:27271549::CGCGCG 157/1832) Row 33728569 (NC_000016.10:27271549::CGCGCGCG 4/1832) Row 33728570 (NC_000016.10:27271549::CGCGCGCGCG 1/1832)	-	Apr 27, 2020 (154)
69	Korean Genome Project Submission ignored due to conflicting rows: Row 33728568 (NC_000016.10:27271549::CGCGCG 157/1832) Row 33728569 (NC_000016.10:27271549::CGCGCGCG 4/1832) Row 33728570 (NC_000016.10:27271549::CGCGCGCGCG 1/1832)	-	Apr 27, 2020 (154)
70	Northern Sweden Submission ignored due to conflicting rows: Row 14733325 (NC_000016.9:27282870::CGCGCG 70/598) Row 14733326 (NC_000016.9:27282870::CGCGCGCG 4/598)	-	Jul 13, 2019 (153)
71	Northern Sweden Submission ignored due to conflicting rows: Row 14733325 (NC_000016.9:27282870::CGCGCG 70/598) Row 14733326 (NC_000016.9:27282870::CGCGCGCG 4/598)	-	Jul 13, 2019 (153)
72	8.3KJPN Submission ignored due to conflicting rows: Row 77027890 (NC_000016.9:27282870::CGCGCG 1572/16730) Row 77027891 (NC_000016.9:27282870::CGCGCGCG 29/16730) Row 77027892 (NC_000016.9:27282870:CG: 1/16730)...	-	Apr 27, 2021 (155)
73	8.3KJPN Submission ignored due to conflicting rows: Row 77027890 (NC_000016.9:27282870::CGCGCG 1572/16730) Row 77027891 (NC_000016.9:27282870::CGCGCGCG 29/16730) Row 77027892 (NC_000016.9:27282870:CG: 1/16730)...	-	Apr 27, 2021 (155)
74	8.3KJPN Submission ignored due to conflicting rows: Row 77027890 (NC_000016.9:27282870::CGCGCG 1572/16730) Row 77027891 (NC_000016.9:27282870::CGCGCGCG 29/16730) Row 77027892 (NC_000016.9:27282870:CG: 1/16730)...	-	Apr 27, 2021 (155)
75	8.3KJPN Submission ignored due to conflicting rows: Row 77027890 (NC_000016.9:27282870::CGCGCG 1572/16730) Row 77027891 (NC_000016.9:27282870::CGCGCGCG 29/16730) Row 77027892 (NC_000016.9:27282870:CG: 1/16730)...	-	Apr 27, 2021 (155)
76	14KJPN Submission ignored due to conflicting rows: Row 107559731 (NC_000016.10:27271549::CGCGCG 2648/28258) Row 107559732 (NC_000016.10:27271549::CG 8/28258) Row 107559733 (NC_000016.10:27271549::CGCGCGCG 44/28258)...	-	Oct 16, 2022 (156)
77	14KJPN Submission ignored due to conflicting rows: Row 107559731 (NC_000016.10:27271549::CGCGCG 2648/28258) Row 107559732 (NC_000016.10:27271549::CG 8/28258) Row 107559733 (NC_000016.10:27271549::CGCGCGCG 44/28258)...	-	Oct 16, 2022 (156)
78	14KJPN Submission ignored due to conflicting rows: Row 107559731 (NC_000016.10:27271549::CGCGCG 2648/28258) Row 107559732 (NC_000016.10:27271549::CG 8/28258) Row 107559733 (NC_000016.10:27271549::CGCGCGCG 44/28258)...	-	Oct 16, 2022 (156)
79	14KJPN Submission ignored due to conflicting rows: Row 107559731 (NC_000016.10:27271549::CGCGCG 2648/28258) Row 107559732 (NC_000016.10:27271549::CG 8/28258) Row 107559733 (NC_000016.10:27271549::CGCGCGCG 44/28258)...	-	Oct 16, 2022 (156)
80	14KJPN Submission ignored due to conflicting rows: Row 107559731 (NC_000016.10:27271549::CGCGCG 2648/28258) Row 107559732 (NC_000016.10:27271549::CG 8/28258) Row 107559733 (NC_000016.10:27271549::CGCGCGCG 44/28258)...	-	Oct 16, 2022 (156)
81	UK 10K study - Twins Submission ignored due to conflicting rows: Row 38327407 (NC_000016.9:27282870::CGCGCG 970/3708) Row 38327408 (NC_000016.9:27282870::CGCGCGCG 363/3708)	-	Oct 12, 2018 (152)
82	UK 10K study - Twins Submission ignored due to conflicting rows: Row 38327407 (NC_000016.9:27282870::CGCGCG 970/3708) Row 38327408 (NC_000016.9:27282870::CGCGCGCG 363/3708)	-	Oct 12, 2018 (152)
83	ALFA	NC_000016.10 - 27271550	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5219058585	NC_000016.9:27282870:CG:	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGC	(self)
ss3699093084, ss4299090719, ss5773722630	NC_000016.10:27271549:CG:	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGC	(self)
13049128192	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGC	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGC	(self)
ss3014292080	NC_000016.9:27282870::CG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGC	(self)
ss4299090710, ss5494048733, ss5773722628	NC_000016.10:27271549::CG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGC	(self)
13049128192	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGC	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGC	(self)
ss3699093083	NC_000016.10:27271551::CG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGC	(self)
ss666667902	NC_000016.9:27282870::CGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGC	(self)
ss4299090711, ss5300601671, ss5494048732	NC_000016.10:27271549::CGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGC	(self)
13049128192	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGC	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGC	(self)
ss3699093082	NC_000016.10:27271551::CGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGC	(self)
ss327725893, ss327846721, ss328190882, ss552803758, ss553595050	NC_000016.8:27190371::CGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGC	(self)
27117745, 523766, ss1574944883, ss1708514495, ss1708514817, ss2031299615, ss3014292078, ss3681379497, ss3741448460, ss3834538417, ss5219058583	NC_000016.9:27282870::CGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGC	(self)
ss3063842415, ss3065617154, ss3846367340, ss3977350567, ss4299090712, ss5300601668, ss5494048734, ss5773722627, ss5851542857	NC_000016.10:27271549::CGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGC	(self)
13049128192	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGC	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGC	(self)
ss3699093081	NC_000016.10:27271551::CGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGC	(self)
ss1708514497, ss1708514821, ss3014292079, ss3741448461, ss5219058584	NC_000016.9:27282870::CGCGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGC	(self)
ss3977350568, ss4299090713, ss5300601669, ss5494048735, ss5773722629	NC_000016.10:27271549::CGCGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGC	(self)
13049128192	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGC	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGC	(self)
ss3699093080	NC_000016.10:27271551::CGCGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGC	(self)
ss5219058586	NC_000016.9:27282870::CGCGCGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGCGC	(self)
ss3977350569, ss4299090714, ss5300601670, ss5773722631	NC_000016.10:27271549::CGCGCGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGCGC	(self)
13049128192	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGCGC	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGCGC	(self)
ss4299090715	NC_000016.10:27271549::CGCGCGCGCGCG	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGCGCGC	(self)
13049128192	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGCGCGC	NC_000016.10:27271549:CGCGCGCGCGC:… NC_000016.10:27271549:CGCGCGCGCGC:CGCGCGCGCGCGCGCGCGCGCGC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs146988397

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs146988397