Name: rs148943235
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs148943235

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr16:82072212-82072229 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(GA)₅ / del(GA)₄ / del(GA)₃ / d…
del(GA)₅ / del(GA)₄ / del(GA)₃ / delGAGA / delGA / dupGA / dupGAGA
Variation Type: Indel Insertion and Deletion
Frequency: dupGA=0.00006 (1/18126, ALFA)
dupGA=0.00042 (7/16760, 8.3KJPN)
dupGA=0.0198 (99/5008, 1000G) (+ 1 more)
delGAGA=0.0023 (9/3854, ALSPAC)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: HSD17B2 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HTRZ	HWEP
Total	Global	18126	GAGAGAGAGAGAGAGAGA=0.99994	GAGAGAGA=0.00000, GAGAGAGAGA=0.00000, GAGAGAGAGAGA=0.00000, GAGAGAGAGAGAGA=0.00000, GAGAGAGAGAGAGAGA=0.00000, GAGAGAGAGAGAGAGAGAGA=0.00006, GAGAGAGAGAGAGAGAGAGAGA=0.00000	0.99989	0.00011	0
European	Sub	14142	GAGAGAGAGAGAGAGAGA=0.99993	GAGAGAGA=0.00000, GAGAGAGAGA=0.00000, GAGAGAGAGAGA=0.00000, GAGAGAGAGAGAGA=0.00000, GAGAGAGAGAGAGAGA=0.00000, GAGAGAGAGAGAGAGAGAGA=0.00007, GAGAGAGAGAGAGAGAGAGAGA=0.00000	0.999859	0.000141	0
African	Sub	2540	GAGAGAGAGAGAGAGAGA=1.0000	GAGAGAGA=0.0000, GAGAGAGAGA=0.0000, GAGAGAGAGAGA=0.0000, GAGAGAGAGAGAGA=0.0000, GAGAGAGAGAGAGAGA=0.0000, GAGAGAGAGAGAGAGAGAGA=0.0000, GAGAGAGAGAGAGAGAGAGAGA=0.0000	1.0	0.0	N/A
African Others	Sub	102	GAGAGAGAGAGAGAGAGA=1.000	GAGAGAGA=0.000, GAGAGAGAGA=0.000, GAGAGAGAGAGA=0.000, GAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGAGA=0.000	1.0	0.0	N/A
African American	Sub	2438	GAGAGAGAGAGAGAGAGA=1.0000	GAGAGAGA=0.0000, GAGAGAGAGA=0.0000, GAGAGAGAGAGA=0.0000, GAGAGAGAGAGAGA=0.0000, GAGAGAGAGAGAGAGA=0.0000, GAGAGAGAGAGAGAGAGAGA=0.0000, GAGAGAGAGAGAGAGAGAGAGA=0.0000	1.0	0.0	N/A
Asian	Sub	112	GAGAGAGAGAGAGAGAGA=1.000	GAGAGAGA=0.000, GAGAGAGAGA=0.000, GAGAGAGAGAGA=0.000, GAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGAGA=0.000	1.0	0.0	N/A
East Asian	Sub	86	GAGAGAGAGAGAGAGAGA=1.00	GAGAGAGA=0.00, GAGAGAGAGA=0.00, GAGAGAGAGAGA=0.00, GAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGAGAGAGA=0.00	1.0	0.0	N/A
Other Asian	Sub	26	GAGAGAGAGAGAGAGAGA=1.00	GAGAGAGA=0.00, GAGAGAGAGA=0.00, GAGAGAGAGAGA=0.00, GAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGAGAGAGA=0.00	1.0	0.0	N/A
Latin American 1	Sub	146	GAGAGAGAGAGAGAGAGA=1.000	GAGAGAGA=0.000, GAGAGAGAGA=0.000, GAGAGAGAGAGA=0.000, GAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGAGA=0.000	1.0	0.0	N/A
Latin American 2	Sub	608	GAGAGAGAGAGAGAGAGA=1.000	GAGAGAGA=0.000, GAGAGAGAGA=0.000, GAGAGAGAGAGA=0.000, GAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGAGA=0.000	1.0	0.0	N/A
South Asian	Sub	96	GAGAGAGAGAGAGAGAGA=1.00	GAGAGAGA=0.00, GAGAGAGAGA=0.00, GAGAGAGAGAGA=0.00, GAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGAGAGA=0.00, GAGAGAGAGAGAGAGAGAGAGA=0.00	1.0	0.0	N/A
Other	Sub	482	GAGAGAGAGAGAGAGAGA=1.000	GAGAGAGA=0.000, GAGAGAGAGA=0.000, GAGAGAGAGAGA=0.000, GAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGA=0.000, GAGAGAGAGAGAGAGAGAGAGA=0.000	1.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	18126	(GA)₉=0.99994	del(GA)₅=0.00000, del(GA)₄=0.00000, del(GA)₃=0.00000, delGAGA=0.00000, delGA=0.00000, dupGA=0.00006, dupGAGA=0.00000
Allele Frequency Aggregator	European	Sub	14142	(GA)₉=0.99993	del(GA)₅=0.00000, del(GA)₄=0.00000, del(GA)₃=0.00000, delGAGA=0.00000, delGA=0.00000, dupGA=0.00007, dupGAGA=0.00000
Allele Frequency Aggregator	African	Sub	2540	(GA)₉=1.0000	del(GA)₅=0.0000, del(GA)₄=0.0000, del(GA)₃=0.0000, delGAGA=0.0000, delGA=0.0000, dupGA=0.0000, dupGAGA=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	608	(GA)₉=1.000	del(GA)₅=0.000, del(GA)₄=0.000, del(GA)₃=0.000, delGAGA=0.000, delGA=0.000, dupGA=0.000, dupGAGA=0.000
Allele Frequency Aggregator	Other	Sub	482	(GA)₉=1.000	del(GA)₅=0.000, del(GA)₄=0.000, del(GA)₃=0.000, delGAGA=0.000, delGA=0.000, dupGA=0.000, dupGAGA=0.000
Allele Frequency Aggregator	Latin American 1	Sub	146	(GA)₉=1.000	del(GA)₅=0.000, del(GA)₄=0.000, del(GA)₃=0.000, delGAGA=0.000, delGA=0.000, dupGA=0.000, dupGAGA=0.000
Allele Frequency Aggregator	Asian	Sub	112	(GA)₉=1.000	del(GA)₅=0.000, del(GA)₄=0.000, del(GA)₃=0.000, delGAGA=0.000, delGA=0.000, dupGA=0.000, dupGAGA=0.000
Allele Frequency Aggregator	South Asian	Sub	96	(GA)₉=1.00	del(GA)₅=0.00, del(GA)₄=0.00, del(GA)₃=0.00, delGAGA=0.00, delGA=0.00, dupGA=0.00, dupGAGA=0.00
8.3KJPN	JAPANESE	Study-wide	16760	- No frequency provided	dupGA=0.00042
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupGA=0.0198
1000Genomes	African	Sub	1322	- No frequency provided	dupGA=0.0719
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupGA=0.0010
1000Genomes	Europe	Sub	1006	- No frequency provided	dupGA=0.0000
1000Genomes	South Asian	Sub	978	- No frequency provided	dupGA=0.000
1000Genomes	American	Sub	694	- No frequency provided	dupGA=0.004
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(GA)₉=0.9977	delGAGA=0.0023

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 16	NC_000016.10:g.82072212GA[4]
GRCh38.p14 chr 16	NC_000016.10:g.82072212GA[5]
GRCh38.p14 chr 16	NC_000016.10:g.82072212GA[6]
GRCh38.p14 chr 16	NC_000016.10:g.82072212GA[7]
GRCh38.p14 chr 16	NC_000016.10:g.82072212GA[8]
GRCh38.p14 chr 16	NC_000016.10:g.82072212GA[10]
GRCh38.p14 chr 16	NC_000016.10:g.82072212GA[11]
GRCh37.p13 chr 16	NC_000016.9:g.82105817GA[4]
GRCh37.p13 chr 16	NC_000016.9:g.82105817GA[5]
GRCh37.p13 chr 16	NC_000016.9:g.82105817GA[6]
GRCh37.p13 chr 16	NC_000016.9:g.82105817GA[7]
GRCh37.p13 chr 16	NC_000016.9:g.82105817GA[8]
GRCh37.p13 chr 16	NC_000016.9:g.82105817GA[10]
GRCh37.p13 chr 16	NC_000016.9:g.82105817GA[11]

Gene: HSD17B2, hydroxysteroid 17-beta dehydrogenase 2 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
HSD17B2 transcript	NM_002153.3:c.664+1085GA[… NM_002153.3:c.664+1085GA[4]	N/A	Intron Variant
HSD17B2 transcript variant X1	XM_047434049.1:c.664+1085… XM_047434049.1:c.664+1085GA[4]	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(GA)₉=	del(GA)₅	del(GA)₄	del(GA)₃	delGAGA	delGA	dupGA	dupGAGA
GRCh38.p14 chr 16	NC_000016.10:g.82072212_82072229=	NC_000016.10:g.82072212GA[4]	NC_000016.10:g.82072212GA[5]	NC_000016.10:g.82072212GA[6]	NC_000016.10:g.82072212GA[7]	NC_000016.10:g.82072212GA[8]	NC_000016.10:g.82072212GA[10]	NC_000016.10:g.82072212GA[11]
GRCh37.p13 chr 16	NC_000016.9:g.82105817_82105834=	NC_000016.9:g.82105817GA[4]	NC_000016.9:g.82105817GA[5]	NC_000016.9:g.82105817GA[6]	NC_000016.9:g.82105817GA[7]	NC_000016.9:g.82105817GA[8]	NC_000016.9:g.82105817GA[10]	NC_000016.9:g.82105817GA[11]
HSD17B2 transcript	NM_002153.2:c.664+1085=	NM_002153.2:c.664+1085GA[4]	NM_002153.2:c.664+1085GA[5]	NM_002153.2:c.664+1085GA[6]	NM_002153.2:c.664+1085GA[7]	NM_002153.2:c.664+1085GA[8]	NM_002153.2:c.664+1085GA[10]	NM_002153.2:c.664+1085GA[11]
HSD17B2 transcript	NM_002153.3:c.664+1085=	NM_002153.3:c.664+1085GA[4]	NM_002153.3:c.664+1085GA[5]	NM_002153.3:c.664+1085GA[6]	NM_002153.3:c.664+1085GA[7]	NM_002153.3:c.664+1085GA[8]	NM_002153.3:c.664+1085GA[10]	NM_002153.3:c.664+1085GA[11]
HSD17B2 transcript variant X1	XM_047434049.1:c.664+1085=	XM_047434049.1:c.664+1085GA[4]	XM_047434049.1:c.664+1085GA[5]	XM_047434049.1:c.664+1085GA[6]	XM_047434049.1:c.664+1085GA[7]	XM_047434049.1:c.664+1085GA[8]	XM_047434049.1:c.664+1085GA[10]	XM_047434049.1:c.664+1085GA[11]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

36 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	1000GENOMES	ss327753463	May 09, 2011 (134)
2	1000GENOMES	ss327876544	May 09, 2011 (134)
3	1000GENOMES	ss328204333	Jan 10, 2018 (151)
4	LUNTER	ss552495467	Apr 25, 2013 (138)
5	LUNTER	ss552834978	Apr 25, 2013 (138)
6	LUNTER	ss553605990	Apr 25, 2013 (138)
7	SSMP	ss664334881	Apr 01, 2015 (144)
8	1000GENOMES	ss1376120397	Aug 21, 2014 (142)
9	EVA_UK10K_ALSPAC	ss1708626603	Apr 01, 2015 (144)
10	EVA_UK10K_TWINSUK	ss1708626624	Apr 01, 2015 (144)
11	EVA_UK10K_ALSPAC	ss1710712197	Apr 01, 2015 (144)
12	EVA_UK10K_TWINSUK	ss1710712198	Apr 01, 2015 (144)
13	JJLAB	ss2031316686	Sep 14, 2016 (149)
14	SYSTEMSBIOZJU	ss2628928463	Jan 10, 2018 (151)
15	KHV_HUMAN_GENOMES	ss3819506041	Jul 13, 2019 (153)
16	EVA	ss3834686704	Apr 27, 2020 (154)
17	KOGIC	ss3978050748	Apr 27, 2020 (154)
18	KOGIC	ss3978050749	Apr 27, 2020 (154)
19	GNOMAD	ss4305147687	Apr 26, 2021 (155)
20	GNOMAD	ss4305147688	Apr 26, 2021 (155)
21	GNOMAD	ss4305147689	Apr 26, 2021 (155)
22	GNOMAD	ss4305147690	Apr 26, 2021 (155)
23	GNOMAD	ss4305147691	Apr 26, 2021 (155)
24	GNOMAD	ss4305147692	Apr 26, 2021 (155)
25	TOPMED	ss5023800569	Apr 26, 2021 (155)
26	TOPMED	ss5023800571	Apr 26, 2021 (155)
27	TOPMED	ss5023800572	Apr 26, 2021 (155)
28	TOPMED	ss5023800573	Apr 26, 2021 (155)
29	TOPMED	ss5023800574	Apr 26, 2021 (155)
30	TOMMO_GENOMICS	ss5220676413	Apr 26, 2021 (155)
31	1000G_HIGH_COVERAGE	ss5301797989	Oct 16, 2022 (156)
32	1000G_HIGH_COVERAGE	ss5301797990	Oct 16, 2022 (156)
33	HUGCELL_USP	ss5495059190	Oct 16, 2022 (156)
34	TOMMO_GENOMICS	ss5776006844	Oct 16, 2022 (156)
35	TOMMO_GENOMICS	ss5776006845	Oct 16, 2022 (156)
36	YY_MCH	ss5816175672	Oct 16, 2022 (156)
37	1000Genomes	NC_000016.9 - 82105817	Oct 12, 2018 (152)
38	The Avon Longitudinal Study of Parents and Children	NC_000016.9 - 82105817	Oct 12, 2018 (152)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 496598330 (NC_000016.10:82072211::GA 2717/139058) Row 496598331 (NC_000016.10:82072211::GAGA 9/139072) Row 496598332 (NC_000016.10:82072211:GA: 5/139016)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 496598330 (NC_000016.10:82072211::GA 2717/139058) Row 496598331 (NC_000016.10:82072211::GAGA 9/139072) Row 496598332 (NC_000016.10:82072211:GA: 5/139016)...	-	Apr 26, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 496598330 (NC_000016.10:82072211::GA 2717/139058) Row 496598331 (NC_000016.10:82072211::GAGA 9/139072) Row 496598332 (NC_000016.10:82072211:GA: 5/139016)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 496598330 (NC_000016.10:82072211::GA 2717/139058) Row 496598331 (NC_000016.10:82072211::GAGA 9/139072) Row 496598332 (NC_000016.10:82072211:GA: 5/139016)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 496598330 (NC_000016.10:82072211::GA 2717/139058) Row 496598331 (NC_000016.10:82072211::GAGA 9/139072) Row 496598332 (NC_000016.10:82072211:GA: 5/139016)...	-	Apr 26, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 496598330 (NC_000016.10:82072211::GA 2717/139058) Row 496598331 (NC_000016.10:82072211::GAGA 9/139072) Row 496598332 (NC_000016.10:82072211:GA: 5/139016)...	-	Apr 26, 2021 (155)
45	Korean Genome Project Submission ignored due to conflicting rows: Row 34428749 (NC_000016.10:82072213::GA 4/1832) Row 34428750 (NC_000016.10:82072211:GA: 10/1832)	-	Apr 27, 2020 (154)
46	Korean Genome Project Submission ignored due to conflicting rows: Row 34428749 (NC_000016.10:82072213::GA 4/1832) Row 34428750 (NC_000016.10:82072211:GA: 10/1832)	-	Apr 27, 2020 (154)
47	8.3KJPN	NC_000016.9 - 82105817	Apr 26, 2021 (155)
48	14KJPN Submission ignored due to conflicting rows: Row 109843948 (NC_000016.10:82072211::GA 10/28258) Row 109843949 (NC_000016.10:82072211:GA: 2/28258)	-	Oct 16, 2022 (156)
49	14KJPN Submission ignored due to conflicting rows: Row 109843948 (NC_000016.10:82072211::GA 10/28258) Row 109843949 (NC_000016.10:82072211:GA: 2/28258)	-	Oct 16, 2022 (156)
50	TopMed Submission ignored due to conflicting rows: Row 239346230 (NC_000016.10:82072211::GA 5387/264690) Row 239346232 (NC_000016.10:82072211:GAGA: 3/264690) Row 239346233 (NC_000016.10:82072211:GAGAGA: 7/264690)...	-	Apr 26, 2021 (155)
51	TopMed Submission ignored due to conflicting rows: Row 239346230 (NC_000016.10:82072211::GA 5387/264690) Row 239346232 (NC_000016.10:82072211:GAGA: 3/264690) Row 239346233 (NC_000016.10:82072211:GAGAGA: 7/264690)...	-	Apr 26, 2021 (155)
52	TopMed Submission ignored due to conflicting rows: Row 239346230 (NC_000016.10:82072211::GA 5387/264690) Row 239346232 (NC_000016.10:82072211:GAGA: 3/264690) Row 239346233 (NC_000016.10:82072211:GAGAGA: 7/264690)...	-	Apr 26, 2021 (155)
53	TopMed Submission ignored due to conflicting rows: Row 239346230 (NC_000016.10:82072211::GA 5387/264690) Row 239346232 (NC_000016.10:82072211:GAGA: 3/264690) Row 239346233 (NC_000016.10:82072211:GAGAGA: 7/264690)...	-	Apr 26, 2021 (155)
54	TopMed Submission ignored due to conflicting rows: Row 239346230 (NC_000016.10:82072211::GA 5387/264690) Row 239346232 (NC_000016.10:82072211:GAGA: 3/264690) Row 239346233 (NC_000016.10:82072211:GAGAGA: 7/264690)...	-	Apr 26, 2021 (155)
55	UK 10K study - Twins Submission ignored due to conflicting rows: Row 39060687 (NC_000016.9:82105818:GA: 236/3708) Row 39060688 (NC_000016.9:82105816:GAGA: 11/3708)	-	Apr 27, 2020 (154)
56	UK 10K study - Twins	-	Oct 12, 2018 (152)
57	ALFA	NC_000016.10 - 82072212	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5023800574	NC_000016.10:82072211:GAGAGAGAGA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGA	(self)
13205731985	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGA	(self)
ss4305147692, ss5023800573	NC_000016.10:82072211:GAGAGAGA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGA	(self)
13205731985	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGA	(self)
ss4305147691, ss5023800572	NC_000016.10:82072211:GAGAGA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGA	(self)
13205731985	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGA	(self)
39060688, ss1708626603, ss1708626624	NC_000016.9:82105816:GAGA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGA	(self)
ss4305147690, ss5023800571	NC_000016.10:82072211:GAGA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGA	(self)
13205731985	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGA	(self)
ss327753463, ss327876544, ss552495467, ss553605990	NC_000016.8:80663317:GA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGA	(self)
ss664334881, ss2628928463	NC_000016.9:82105816:GA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGA	(self)
ss1710712197, ss1710712198	NC_000016.9:82105818:GA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGA	(self)
ss3978050749, ss4305147689, ss5776006845, ss5816175672	NC_000016.10:82072211:GA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGA	(self)
13205731985	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGA	(self)
ss328204333, ss552834978	NC_000016.8:80663317::GA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGA	(self)
70399865, 78645720, ss1376120397, ss2031316686, ss3834686704, ss5220676413	NC_000016.9:82105816::GA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGA	(self)
ss3819506041, ss4305147687, ss5023800569, ss5301797989, ss5495059190, ss5776006844	NC_000016.10:82072211::GA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGA	(self)
13205731985	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGA	(self)
ss3978050748	NC_000016.10:82072213::GA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGA	(self)
ss4305147688, ss5301797990	NC_000016.10:82072211::GAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGA	(self)
13205731985	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGA	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss2378914865	NC_000016.9:82105816::GAGA	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGAGAGAGAGAGA
ss2378914866	NC_000016.9:82105816:GAGAGA:	NC_000016.10:82072211:GAGAGAGAGAGA… NC_000016.10:82072211:GAGAGAGAGAGAGAGAGA:GAGAGAGAGAGA

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs148943235

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs148943235