Name: rs199581410
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs199581410

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:171264336-171264352 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(CA)₆ / del(CA)₅ / delCACA / de…
del(CA)₆ / del(CA)₅ / delCACA / delCA / dupCA / dupCACA / dup(CA)₃
Variation Type: Indel Insertion and Deletion
Frequency: dupCACA=0.00861 (151/17536, ALFA)
dupCACA=0.0074 (37/5008, 1000G)
dupCACA=0.033 (20/600, NorthernSweden) (+ 1 more)
dupCACA=0.05 (2/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: FMO1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	17536	ACACACACACACACACA=0.98996	ACACACA=0.00000, ACACACACACACA=0.00000, ACACACACACACACA=0.00120, ACACACACACACACACACA=0.00023, ACACACACACACACACACACA=0.00861, ACACACACACACACACACACACA=0.00000	0.983185	0.000343	0.016472	5
European	Sub	13528	ACACACACACACACACA=0.98706	ACACACA=0.00000, ACACACACACACA=0.00000, ACACACACACACACA=0.00155, ACACACACACACACACACA=0.00030, ACACACACACACACACACACA=0.01109, ACACACACACACACACACACACA=0.00000	0.978332	0.000445	0.021223	4
African	Sub	2658	ACACACACACACACACA=1.0000	ACACACA=0.0000, ACACACACACACA=0.0000, ACACACACACACACA=0.0000, ACACACACACACACACACA=0.0000, ACACACACACACACACACACA=0.0000, ACACACACACACACACACACACA=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	102	ACACACACACACACACA=1.000	ACACACA=0.000, ACACACACACACA=0.000, ACACACACACACACA=0.000, ACACACACACACACACACA=0.000, ACACACACACACACACACACA=0.000, ACACACACACACACACACACACA=0.000	1.0	0.0	0.0	N/A
African American	Sub	2556	ACACACACACACACACA=1.0000	ACACACA=0.0000, ACACACACACACA=0.0000, ACACACACACACACA=0.0000, ACACACACACACACACACA=0.0000, ACACACACACACACACACACA=0.0000, ACACACACACACACACACACACA=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	94	ACACACACACACACACA=1.00	ACACACA=0.00, ACACACACACACA=0.00, ACACACACACACACA=0.00, ACACACACACACACACACA=0.00, ACACACACACACACACACACA=0.00, ACACACACACACACACACACACA=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	72	ACACACACACACACACA=1.00	ACACACA=0.00, ACACACACACACA=0.00, ACACACACACACACA=0.00, ACACACACACACACACACA=0.00, ACACACACACACACACACACA=0.00, ACACACACACACACACACACACA=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	22	ACACACACACACACACA=1.00	ACACACA=0.00, ACACACACACACA=0.00, ACACACACACACACA=0.00, ACACACACACACACACACA=0.00, ACACACACACACACACACACA=0.00, ACACACACACACACACACACACA=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	128	ACACACACACACACACA=1.000	ACACACA=0.000, ACACACACACACA=0.000, ACACACACACACACA=0.000, ACACACACACACACACACA=0.000, ACACACACACACACACACACA=0.000, ACACACACACACACACACACACA=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	576	ACACACACACACACACA=1.000	ACACACA=0.000, ACACACACACACA=0.000, ACACACACACACACA=0.000, ACACACACACACACACACA=0.000, ACACACACACACACACACACA=0.000, ACACACACACACACACACACACA=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	88	ACACACACACACACACA=1.00	ACACACA=0.00, ACACACACACACA=0.00, ACACACACACACACA=0.00, ACACACACACACACACACA=0.00, ACACACACACACACACACACA=0.00, ACACACACACACACACACACACA=0.00	1.0	0.0	0.0	N/A
Other	Sub	464	ACACACACACACACACA=0.998	ACACACA=0.000, ACACACACACACA=0.000, ACACACACACACACA=0.000, ACACACACACACACACACA=0.000, ACACACACACACACACACACA=0.002, ACACACACACACACACACACACA=0.000	0.99569	0.0	0.00431	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	17536	(AC)₈A=0.98996	del(CA)₅=0.00000, delCACA=0.00000, delCA=0.00120, dupCA=0.00023, dupCACA=0.00861, dup(CA)₃=0.00000
Allele Frequency Aggregator	European	Sub	13528	(AC)₈A=0.98706	del(CA)₅=0.00000, delCACA=0.00000, delCA=0.00155, dupCA=0.00030, dupCACA=0.01109, dup(CA)₃=0.00000
Allele Frequency Aggregator	African	Sub	2658	(AC)₈A=1.0000	del(CA)₅=0.0000, delCACA=0.0000, delCA=0.0000, dupCA=0.0000, dupCACA=0.0000, dup(CA)₃=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	576	(AC)₈A=1.000	del(CA)₅=0.000, delCACA=0.000, delCA=0.000, dupCA=0.000, dupCACA=0.000, dup(CA)₃=0.000
Allele Frequency Aggregator	Other	Sub	464	(AC)₈A=0.998	del(CA)₅=0.000, delCACA=0.000, delCA=0.000, dupCA=0.000, dupCACA=0.002, dup(CA)₃=0.000
Allele Frequency Aggregator	Latin American 1	Sub	128	(AC)₈A=1.000	del(CA)₅=0.000, delCACA=0.000, delCA=0.000, dupCA=0.000, dupCACA=0.000, dup(CA)₃=0.000
Allele Frequency Aggregator	Asian	Sub	94	(AC)₈A=1.00	del(CA)₅=0.00, delCACA=0.00, delCA=0.00, dupCA=0.00, dupCACA=0.00, dup(CA)₃=0.00
Allele Frequency Aggregator	South Asian	Sub	88	(AC)₈A=1.00	del(CA)₅=0.00, delCACA=0.00, delCA=0.00, dupCA=0.00, dupCACA=0.00, dup(CA)₃=0.00
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupCACA=0.0074
1000Genomes	African	Sub	1322	- No frequency provided	dupCACA=0.0008
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupCACA=0.0129
1000Genomes	Europe	Sub	1006	- No frequency provided	dupCACA=0.0139
1000Genomes	South Asian	Sub	978	- No frequency provided	dupCACA=0.004
1000Genomes	American	Sub	694	- No frequency provided	dupCACA=0.007
Northern Sweden	ACPOP	Study-wide	600	- No frequency provided	dupCACA=0.033
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupCACA=0.05

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.171264337CA[2]
GRCh38.p14 chr 1	NC_000001.11:g.171264337CA[3]
GRCh38.p14 chr 1	NC_000001.11:g.171264337CA[6]
GRCh38.p14 chr 1	NC_000001.11:g.171264337CA[7]
GRCh38.p14 chr 1	NC_000001.11:g.171264337CA[9]
GRCh38.p14 chr 1	NC_000001.11:g.171264337CA[10]
GRCh38.p14 chr 1	NC_000001.11:g.171264337CA[11]
GRCh37.p13 chr 1	NC_000001.10:g.171233476CA[2]
GRCh37.p13 chr 1	NC_000001.10:g.171233476CA[3]
GRCh37.p13 chr 1	NC_000001.10:g.171233476CA[6]
GRCh37.p13 chr 1	NC_000001.10:g.171233476CA[7]
GRCh37.p13 chr 1	NC_000001.10:g.171233476CA[9]
GRCh37.p13 chr 1	NC_000001.10:g.171233476CA[10]
GRCh37.p13 chr 1	NC_000001.10:g.171233476CA[11]

Gene: FMO1, flavin containing dimethylaniline monoxygenase 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
FMO1 transcript variant 1	NM_001282692.1:c.145-3207… NM_001282692.1:c.145-3207AC[2]	N/A	Intron Variant
FMO1 transcript variant 3	NM_001282693.2:c.133-3207… NM_001282693.2:c.133-3207AC[2]	N/A	Intron Variant
FMO1 transcript variant 4	NM_001282694.2:c.132+6117… NM_001282694.2:c.132+6117AC[2]	N/A	Intron Variant
FMO1 transcript variant 2	NM_002021.3:c.133-3207AC[… NM_002021.3:c.133-3207AC[2]	N/A	Intron Variant
FMO1 transcript variant X4	XM_005245038.5:c.133-3207… XM_005245038.5:c.133-3207AC[2]	N/A	Intron Variant
FMO1 transcript variant X1	XM_006711241.5:c.133-3207… XM_006711241.5:c.133-3207AC[2]	N/A	Intron Variant
FMO1 transcript variant X3	XM_006711242.5:c.133-3207… XM_006711242.5:c.133-3207AC[2]	N/A	Intron Variant
FMO1 transcript variant X2	XM_005245037.4:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(AC)₈A=	del(CA)₆	del(CA)₅	delCACA	delCA	dupCA	dupCACA	dup(CA)₃
GRCh38.p14 chr 1	NC_000001.11:g.171264336_171264352=	NC_000001.11:g.171264337CA[2]	NC_000001.11:g.171264337CA[3]	NC_000001.11:g.171264337CA[6]	NC_000001.11:g.171264337CA[7]	NC_000001.11:g.171264337CA[9]	NC_000001.11:g.171264337CA[10]	NC_000001.11:g.171264337CA[11]
GRCh37.p13 chr 1	NC_000001.10:g.171233475_171233491=	NC_000001.10:g.171233476CA[2]	NC_000001.10:g.171233476CA[3]	NC_000001.10:g.171233476CA[6]	NC_000001.10:g.171233476CA[7]	NC_000001.10:g.171233476CA[9]	NC_000001.10:g.171233476CA[10]	NC_000001.10:g.171233476CA[11]
FMO1 transcript variant 1	NM_001282692.1:c.145-3207=	NM_001282692.1:c.145-3207AC[2]	NM_001282692.1:c.145-3207AC[3]	NM_001282692.1:c.145-3207AC[6]	NM_001282692.1:c.145-3207AC[7]	NM_001282692.1:c.145-3207AC[9]	NM_001282692.1:c.145-3207AC[10]	NM_001282692.1:c.145-3207AC[11]
FMO1 transcript variant 3	NM_001282693.2:c.133-3207=	NM_001282693.2:c.133-3207AC[2]	NM_001282693.2:c.133-3207AC[3]	NM_001282693.2:c.133-3207AC[6]	NM_001282693.2:c.133-3207AC[7]	NM_001282693.2:c.133-3207AC[9]	NM_001282693.2:c.133-3207AC[10]	NM_001282693.2:c.133-3207AC[11]
FMO1 transcript variant 4	NM_001282694.2:c.132+6117=	NM_001282694.2:c.132+6117AC[2]	NM_001282694.2:c.132+6117AC[3]	NM_001282694.2:c.132+6117AC[6]	NM_001282694.2:c.132+6117AC[7]	NM_001282694.2:c.132+6117AC[9]	NM_001282694.2:c.132+6117AC[10]	NM_001282694.2:c.132+6117AC[11]
FMO1 transcript	NM_002021.1:c.133-3207=	NM_002021.1:c.133-3207AC[2]	NM_002021.1:c.133-3207AC[3]	NM_002021.1:c.133-3207AC[6]	NM_002021.1:c.133-3207AC[7]	NM_002021.1:c.133-3207AC[9]	NM_002021.1:c.133-3207AC[10]	NM_002021.1:c.133-3207AC[11]
FMO1 transcript variant 2	NM_002021.3:c.133-3207=	NM_002021.3:c.133-3207AC[2]	NM_002021.3:c.133-3207AC[3]	NM_002021.3:c.133-3207AC[6]	NM_002021.3:c.133-3207AC[7]	NM_002021.3:c.133-3207AC[9]	NM_002021.3:c.133-3207AC[10]	NM_002021.3:c.133-3207AC[11]
FMO1 transcript variant X1	XM_005245034.1:c.133-3207=	XM_005245034.1:c.133-3207AC[2]	XM_005245034.1:c.133-3207AC[3]	XM_005245034.1:c.133-3207AC[6]	XM_005245034.1:c.133-3207AC[7]	XM_005245034.1:c.133-3207AC[9]	XM_005245034.1:c.133-3207AC[10]	XM_005245034.1:c.133-3207AC[11]
FMO1 transcript variant X2	XM_005245035.1:c.132+6117=	XM_005245035.1:c.132+6117AC[2]	XM_005245035.1:c.132+6117AC[3]	XM_005245035.1:c.132+6117AC[6]	XM_005245035.1:c.132+6117AC[7]	XM_005245035.1:c.132+6117AC[9]	XM_005245035.1:c.132+6117AC[10]	XM_005245035.1:c.132+6117AC[11]
FMO1 transcript variant X5	XM_005245038.1:c.133-3207=	XM_005245038.1:c.133-3207AC[2]	XM_005245038.1:c.133-3207AC[3]	XM_005245038.1:c.133-3207AC[6]	XM_005245038.1:c.133-3207AC[7]	XM_005245038.1:c.133-3207AC[9]	XM_005245038.1:c.133-3207AC[10]	XM_005245038.1:c.133-3207AC[11]
FMO1 transcript variant X4	XM_005245038.5:c.133-3207=	XM_005245038.5:c.133-3207AC[2]	XM_005245038.5:c.133-3207AC[3]	XM_005245038.5:c.133-3207AC[6]	XM_005245038.5:c.133-3207AC[7]	XM_005245038.5:c.133-3207AC[9]	XM_005245038.5:c.133-3207AC[10]	XM_005245038.5:c.133-3207AC[11]
FMO1 transcript variant X1	XM_006711241.5:c.133-3207=	XM_006711241.5:c.133-3207AC[2]	XM_006711241.5:c.133-3207AC[3]	XM_006711241.5:c.133-3207AC[6]	XM_006711241.5:c.133-3207AC[7]	XM_006711241.5:c.133-3207AC[9]	XM_006711241.5:c.133-3207AC[10]	XM_006711241.5:c.133-3207AC[11]
FMO1 transcript variant X3	XM_006711242.5:c.133-3207=	XM_006711242.5:c.133-3207AC[2]	XM_006711242.5:c.133-3207AC[3]	XM_006711242.5:c.133-3207AC[6]	XM_006711242.5:c.133-3207AC[7]	XM_006711242.5:c.133-3207AC[9]	XM_006711242.5:c.133-3207AC[10]	XM_006711242.5:c.133-3207AC[11]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

39 SubSNP, 19 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GMI	ss288054999	May 04, 2012 (137)
2	LUNTER	ss551013023	Jan 10, 2018 (151)
3	SSMP	ss663131774	Apr 01, 2015 (144)
4	SSIP	ss947033247	Jan 10, 2018 (151)
5	1000GENOMES	ss1367892376	Aug 21, 2014 (142)
6	DDI	ss1536252671	Apr 01, 2015 (144)
7	EVA_GENOME_DK	ss1574048470	Apr 01, 2015 (144)
8	SWEGEN	ss2987943475	Jan 10, 2018 (151)
9	EVA_DECODE	ss3688013263	Jul 12, 2019 (153)
10	EVA_DECODE	ss3688013264	Jul 12, 2019 (153)
11	EVA_DECODE	ss3688013266	Jul 12, 2019 (153)
12	ACPOP	ss3727590729	Jul 12, 2019 (153)
13	EVA	ss3826487656	Apr 25, 2020 (154)
14	EVA	ss3836640614	Apr 25, 2020 (154)
15	EVA	ss3842050588	Apr 25, 2020 (154)
16	KOGIC	ss3945884941	Apr 25, 2020 (154)
17	KOGIC	ss3945884942	Apr 25, 2020 (154)
18	KOGIC	ss3945884943	Apr 25, 2020 (154)
19	GNOMAD	ss4005740591	Apr 25, 2021 (155)
20	GNOMAD	ss4005740592	Apr 25, 2021 (155)
21	GNOMAD	ss4005740593	Apr 25, 2021 (155)
22	GNOMAD	ss4005740595	Apr 25, 2021 (155)
23	GNOMAD	ss4005740596	Apr 25, 2021 (155)
24	GNOMAD	ss4005740597	Apr 25, 2021 (155)
25	TOMMO_GENOMICS	ss5147011001	Apr 25, 2021 (155)
26	TOMMO_GENOMICS	ss5147011002	Apr 25, 2021 (155)
27	TOMMO_GENOMICS	ss5147011003	Apr 25, 2021 (155)
28	1000G_HIGH_COVERAGE	ss5244699163	Oct 12, 2022 (156)
29	1000G_HIGH_COVERAGE	ss5244699164	Oct 12, 2022 (156)
30	HUGCELL_USP	ss5445245024	Oct 12, 2022 (156)
31	HUGCELL_USP	ss5445245026	Oct 12, 2022 (156)
32	HUGCELL_USP	ss5445245027	Oct 12, 2022 (156)
33	HUGCELL_USP	ss5445245028	Oct 12, 2022 (156)
34	TOMMO_GENOMICS	ss5674361531	Oct 12, 2022 (156)
35	TOMMO_GENOMICS	ss5674361532	Oct 12, 2022 (156)
36	TOMMO_GENOMICS	ss5674361533	Oct 12, 2022 (156)
37	EVA	ss5832828209	Oct 12, 2022 (156)
38	EVA	ss5832828210	Oct 12, 2022 (156)
39	EVA	ss5849157731	Oct 12, 2022 (156)
40	1000Genomes	NC_000001.10 - 171233475	Oct 11, 2018 (152)
41	The Danish reference pan genome	NC_000001.10 - 171233475	Apr 25, 2020 (154)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30408217 (NC_000001.11:171264335::AC 320/136042) Row 30408218 (NC_000001.11:171264335::ACAC 3758/136030) Row 30408219 (NC_000001.11:171264335::ACACAC 3/136048)...	-	Apr 25, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30408217 (NC_000001.11:171264335::AC 320/136042) Row 30408218 (NC_000001.11:171264335::ACAC 3758/136030) Row 30408219 (NC_000001.11:171264335::ACACAC 3/136048)...	-	Apr 25, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30408217 (NC_000001.11:171264335::AC 320/136042) Row 30408218 (NC_000001.11:171264335::ACAC 3758/136030) Row 30408219 (NC_000001.11:171264335::ACACAC 3/136048)...	-	Apr 25, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30408217 (NC_000001.11:171264335::AC 320/136042) Row 30408218 (NC_000001.11:171264335::ACAC 3758/136030) Row 30408219 (NC_000001.11:171264335::ACACAC 3/136048)...	-	Apr 25, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30408217 (NC_000001.11:171264335::AC 320/136042) Row 30408218 (NC_000001.11:171264335::ACAC 3758/136030) Row 30408219 (NC_000001.11:171264335::ACACAC 3/136048)...	-	Apr 25, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30408217 (NC_000001.11:171264335::AC 320/136042) Row 30408218 (NC_000001.11:171264335::ACAC 3758/136030) Row 30408219 (NC_000001.11:171264335::ACACAC 3/136048)...	-	Apr 25, 2021 (155)
48	Korean Genome Project Submission ignored due to conflicting rows: Row 2262942 (NC_000001.11:171264337::ACAC 114/1830) Row 2262943 (NC_000001.11:171264335:AC: 24/1830) Row 2262944 (NC_000001.11:171264337::AC 4/1830)	-	Apr 25, 2020 (154)
49	Korean Genome Project Submission ignored due to conflicting rows: Row 2262942 (NC_000001.11:171264337::ACAC 114/1830) Row 2262943 (NC_000001.11:171264335:AC: 24/1830) Row 2262944 (NC_000001.11:171264337::AC 4/1830)	-	Apr 25, 2020 (154)
50	Korean Genome Project Submission ignored due to conflicting rows: Row 2262942 (NC_000001.11:171264337::ACAC 114/1830) Row 2262943 (NC_000001.11:171264335:AC: 24/1830) Row 2262944 (NC_000001.11:171264337::AC 4/1830)	-	Apr 25, 2020 (154)
51	Northern Sweden	NC_000001.10 - 171233475	Jul 12, 2019 (153)
52	8.3KJPN Submission ignored due to conflicting rows: Row 4980308 (NC_000001.10:171233474::ACAC 1163/16760) Row 4980309 (NC_000001.10:171233474:AC: 276/16760) Row 4980310 (NC_000001.10:171233474::AC 53/16760)	-	Apr 25, 2021 (155)
53	8.3KJPN Submission ignored due to conflicting rows: Row 4980308 (NC_000001.10:171233474::ACAC 1163/16760) Row 4980309 (NC_000001.10:171233474:AC: 276/16760) Row 4980310 (NC_000001.10:171233474::AC 53/16760)	-	Apr 25, 2021 (155)
54	8.3KJPN Submission ignored due to conflicting rows: Row 4980308 (NC_000001.10:171233474::ACAC 1163/16760) Row 4980309 (NC_000001.10:171233474:AC: 276/16760) Row 4980310 (NC_000001.10:171233474::AC 53/16760)	-	Apr 25, 2021 (155)
55	14KJPN Submission ignored due to conflicting rows: Row 8198635 (NC_000001.11:171264335::ACAC 1958/28256) Row 8198636 (NC_000001.11:171264335::AC 82/28256) Row 8198637 (NC_000001.11:171264335:AC: 447/28256)	-	Oct 12, 2022 (156)
56	14KJPN Submission ignored due to conflicting rows: Row 8198635 (NC_000001.11:171264335::ACAC 1958/28256) Row 8198636 (NC_000001.11:171264335::AC 82/28256) Row 8198637 (NC_000001.11:171264335:AC: 447/28256)	-	Oct 12, 2022 (156)
57	14KJPN Submission ignored due to conflicting rows: Row 8198635 (NC_000001.11:171264335::ACAC 1958/28256) Row 8198636 (NC_000001.11:171264335::AC 82/28256) Row 8198637 (NC_000001.11:171264335:AC: 447/28256)	-	Oct 12, 2022 (156)
58	ALFA	NC_000001.11 - 171264336	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs370321411	May 15, 2013 (138)
rs374349091	May 13, 2013 (138)
rs563134762	Apr 01, 2015 (144)
rs796717648	Nov 08, 2017 (151)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4005740597, ss5445245028	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACAC:	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACA	(self)
11956068441	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACA	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACA	(self)
ss4005740596	NC_000001.11:171264335:ACAC:	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACA	(self)
11956068441	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACA	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACA	(self)
ss551013023	NC_000001.9:169500098:AC:	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACA	(self)
ss947033247, ss2987943475, ss5147011002, ss5832828210	NC_000001.10:171233474:AC:	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACA	(self)
ss3688013266, ss3945884942, ss4005740595, ss5244699164, ss5445245027, ss5674361533	NC_000001.11:171264335:AC:	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACA	(self)
11956068441	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACA	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACA	(self)
ss3826487656, ss5147011003	NC_000001.10:171233474::AC	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACA	(self)
ss4005740591, ss5445245026, ss5674361532	NC_000001.11:171264335::AC	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACA	(self)
11956068441	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACA	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACA	(self)
ss3688013264, ss3945884943	NC_000001.11:171264337::AC	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACA	(self)
ss288054999	NC_000001.9:169500115::CACA	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACA	(self)
4204286, 180564, 875594, ss663131774, ss1367892376, ss1536252671, ss1574048470, ss3727590729, ss3836640614, ss5147011001, ss5832828209	NC_000001.10:171233474::ACAC	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACA	(self)
ss3842050588, ss4005740592, ss5244699163, ss5445245024, ss5674361531, ss5849157731	NC_000001.11:171264335::ACAC	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACA	(self)
11956068441	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACA	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACA	(self)
ss3688013263, ss3945884941	NC_000001.11:171264337::ACAC	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACA	(self)
ss4005740593	NC_000001.11:171264335::ACACAC	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACACA	(self)
11956068441	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACACA	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACACA	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss2330028015	NC_000001.10:171233474::ACACAC	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACACACACACACACACACA
ss3095166227	NC_000001.11:171264335:ACACACACAC:	NC_000001.11:171264335:ACACACACACA… NC_000001.11:171264335:ACACACACACACACACA:ACACACA

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs199581410

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs199581410