Name: rs200082291
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs200082291

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr4:82734767-82734782 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTTT / delTT / delT / dupT / dup…
delTTT / delTT / delT / dupT / dupTT / dup(T)₉
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.1172 (1056/9014, ALFA)
delT=0.4501 (2254/5008, 1000G)
delT=0.228 (137/600, NorthernSweden)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SCD5 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	9014	TTTTTTTTTTTTTTTT=0.8822	TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.1172, TTTTTTTTTTTTTTTTT=0.0007, TTTTTTTTTTTTTTTTTT=0.0000	0.787825	0.022439	0.189736	17
European	Sub	7930	TTTTTTTTTTTTTTTT=0.8662	TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.1330, TTTTTTTTTTTTTTTTT=0.0008, TTTTTTTTTTTTTTTTTT=0.0000	0.75903	0.025511	0.215458	10
African	Sub	602	TTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	18	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	584	TTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	40	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	34	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	6	TTTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	64	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	160	TTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	52	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	166	TTTTTTTTTTTTTTTT=0.994	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.006, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000	0.987952	0.0	0.012048	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	9014	(T)₁₆=0.8822	delTTT=0.0000, delTT=0.0000, delT=0.1172, dupT=0.0007, dupTT=0.0000
Allele Frequency Aggregator	European	Sub	7930	(T)₁₆=0.8662	delTTT=0.0000, delTT=0.0000, delT=0.1330, dupT=0.0008, dupTT=0.0000
Allele Frequency Aggregator	African	Sub	602	(T)₁₆=1.000	delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Other	Sub	166	(T)₁₆=0.994	delTTT=0.000, delTT=0.000, delT=0.006, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Latin American 2	Sub	160	(T)₁₆=1.000	delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Latin American 1	Sub	64	(T)₁₆=1.00	delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	South Asian	Sub	52	(T)₁₆=1.00	delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	Asian	Sub	40	(T)₁₆=1.00	delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
1000Genomes	Global	Study-wide	5008	(T)₁₆=0.5499	delT=0.4501
1000Genomes	African	Sub	1322	(T)₁₆=0.4365	delT=0.5635
1000Genomes	East Asian	Sub	1008	(T)₁₆=0.5873	delT=0.4127
1000Genomes	Europe	Sub	1006	(T)₁₆=0.6302	delT=0.3698
1000Genomes	South Asian	Sub	978	(T)₁₆=0.628	delT=0.372
1000Genomes	American	Sub	694	(T)₁₆=0.486	delT=0.514
Northern Sweden	ACPOP	Study-wide	600	(T)₁₆=0.772	delT=0.228

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 4	NC_000004.12:g.82734780_82734782del
GRCh38.p14 chr 4	NC_000004.12:g.82734781_82734782del
GRCh38.p14 chr 4	NC_000004.12:g.82734782del
GRCh38.p14 chr 4	NC_000004.12:g.82734782dup
GRCh38.p14 chr 4	NC_000004.12:g.82734781_82734782dup
GRCh38.p14 chr 4	NC_000004.12:g.82734774_82734782dup
GRCh37.p13 chr 4	NC_000004.11:g.83655933_83655935del
GRCh37.p13 chr 4	NC_000004.11:g.83655934_83655935del
GRCh37.p13 chr 4	NC_000004.11:g.83655935del
GRCh37.p13 chr 4	NC_000004.11:g.83655935dup
GRCh37.p13 chr 4	NC_000004.11:g.83655934_83655935dup
GRCh37.p13 chr 4	NC_000004.11:g.83655927_83655935dup

Gene: SCD5, stearoyl-CoA desaturase 5 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SCD5 transcript variant 1	NM_001037582.3:c.233-2935… NM_001037582.3:c.233-29356_233-29354del	N/A	Intron Variant
SCD5 transcript variant 2	NM_024906.3:c.233-29356_2… NM_024906.3:c.233-29356_233-29354del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₆=	delTTT	delTT	delT	dupT	dupTT	dup(T)₉
GRCh38.p14 chr 4	NC_000004.12:g.82734767_82734782=	NC_000004.12:g.82734780_82734782del	NC_000004.12:g.82734781_82734782del	NC_000004.12:g.82734782del	NC_000004.12:g.82734782dup	NC_000004.12:g.82734781_82734782dup	NC_000004.12:g.82734774_82734782dup
GRCh37.p13 chr 4	NC_000004.11:g.83655920_83655935=	NC_000004.11:g.83655933_83655935del	NC_000004.11:g.83655934_83655935del	NC_000004.11:g.83655935del	NC_000004.11:g.83655935dup	NC_000004.11:g.83655934_83655935dup	NC_000004.11:g.83655927_83655935dup
SCD5 transcript variant 1	NM_001037582.2:c.233-29354=	NM_001037582.2:c.233-29356_233-29354del	NM_001037582.2:c.233-29355_233-29354del	NM_001037582.2:c.233-29354del	NM_001037582.2:c.233-29354dup	NM_001037582.2:c.233-29355_233-29354dup	NM_001037582.2:c.233-29362_233-29354dup
SCD5 transcript variant 1	NM_001037582.3:c.233-29354=	NM_001037582.3:c.233-29356_233-29354del	NM_001037582.3:c.233-29355_233-29354del	NM_001037582.3:c.233-29354del	NM_001037582.3:c.233-29354dup	NM_001037582.3:c.233-29355_233-29354dup	NM_001037582.3:c.233-29362_233-29354dup
SCD5 transcript variant 2	NM_024906.2:c.233-29354=	NM_024906.2:c.233-29356_233-29354del	NM_024906.2:c.233-29355_233-29354del	NM_024906.2:c.233-29354del	NM_024906.2:c.233-29354dup	NM_024906.2:c.233-29355_233-29354dup	NM_024906.2:c.233-29362_233-29354dup
SCD5 transcript variant 2	NM_024906.3:c.233-29354=	NM_024906.3:c.233-29356_233-29354del	NM_024906.3:c.233-29355_233-29354del	NM_024906.3:c.233-29354del	NM_024906.3:c.233-29354dup	NM_024906.3:c.233-29355_233-29354dup	NM_024906.3:c.233-29362_233-29354dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

34 SubSNP, 14 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GMI	ss288548807	May 04, 2012 (137)
2	SSMP	ss663533428	Apr 01, 2015 (144)
3	1000GENOMES	ss1372394575	Aug 21, 2014 (142)
4	SWEGEN	ss2995022373	Nov 08, 2017 (151)
5	MCHAISSO	ss3064977413	Nov 08, 2017 (151)
6	MCHAISSO	ss3065959725	Nov 08, 2017 (151)
7	EVA_DECODE	ss3712432498	Jul 13, 2019 (153)
8	EVA_DECODE	ss3712432499	Jul 13, 2019 (153)
9	EVA_DECODE	ss3712432500	Jul 13, 2019 (153)
10	EVA_DECODE	ss3712432501	Jul 13, 2019 (153)
11	ACPOP	ss3731322039	Jul 13, 2019 (153)
12	PACBIO	ss3790221271	Jul 13, 2019 (153)
13	PACBIO	ss3795096624	Jul 13, 2019 (153)
14	KHV_HUMAN_GENOMES	ss3805177369	Jul 13, 2019 (153)
15	EVA	ss3828644320	Apr 26, 2020 (154)
16	EVA	ss3837763677	Apr 26, 2020 (154)
17	EVA	ss3843201382	Apr 26, 2020 (154)
18	GNOMAD	ss4114701074	Apr 26, 2021 (155)
19	GNOMAD	ss4114701075	Apr 26, 2021 (155)
20	GNOMAD	ss4114701076	Apr 26, 2021 (155)
21	GNOMAD	ss4114701077	Apr 26, 2021 (155)
22	GNOMAD	ss4114701078	Apr 26, 2021 (155)
23	TOMMO_GENOMICS	ss5166575554	Apr 26, 2021 (155)
24	TOMMO_GENOMICS	ss5166575555	Apr 26, 2021 (155)
25	TOMMO_GENOMICS	ss5166575556	Apr 26, 2021 (155)
26	1000G_HIGH_COVERAGE	ss5259885248	Oct 17, 2022 (156)
27	1000G_HIGH_COVERAGE	ss5259885249	Oct 17, 2022 (156)
28	1000G_HIGH_COVERAGE	ss5259885250	Oct 17, 2022 (156)
29	HUGCELL_USP	ss5458571158	Oct 17, 2022 (156)
30	HUGCELL_USP	ss5458571159	Oct 17, 2022 (156)
31	TOMMO_GENOMICS	ss5701163134	Oct 17, 2022 (156)
32	TOMMO_GENOMICS	ss5701163135	Oct 17, 2022 (156)
33	TOMMO_GENOMICS	ss5701163136	Oct 17, 2022 (156)
34	EVA	ss5854308829	Oct 17, 2022 (156)
35	1000Genomes	NC_000004.11 - 83655920	Oct 12, 2018 (152)
36	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155453096 (NC_000004.12:82734766::T 766/128354) Row 155453097 (NC_000004.12:82734766::TT 7/128380) Row 155453098 (NC_000004.12:82734766:T: 49609/128158)...	-	Apr 26, 2021 (155)
37	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155453096 (NC_000004.12:82734766::T 766/128354) Row 155453097 (NC_000004.12:82734766::TT 7/128380) Row 155453098 (NC_000004.12:82734766:T: 49609/128158)...	-	Apr 26, 2021 (155)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155453096 (NC_000004.12:82734766::T 766/128354) Row 155453097 (NC_000004.12:82734766::TT 7/128380) Row 155453098 (NC_000004.12:82734766:T: 49609/128158)...	-	Apr 26, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155453096 (NC_000004.12:82734766::T 766/128354) Row 155453097 (NC_000004.12:82734766::TT 7/128380) Row 155453098 (NC_000004.12:82734766:T: 49609/128158)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 155453096 (NC_000004.12:82734766::T 766/128354) Row 155453097 (NC_000004.12:82734766::TT 7/128380) Row 155453098 (NC_000004.12:82734766:T: 49609/128158)...	-	Apr 26, 2021 (155)
41	Northern Sweden	NC_000004.11 - 83655920	Jul 13, 2019 (153)
42	8.3KJPN Submission ignored due to conflicting rows: Row 24544861 (NC_000004.11:83655919:T: 7119/16760) Row 24544862 (NC_000004.11:83655919:TT: 223/16760) Row 24544863 (NC_000004.11:83655919::T 10/16760)	-	Apr 26, 2021 (155)
43	8.3KJPN Submission ignored due to conflicting rows: Row 24544861 (NC_000004.11:83655919:T: 7119/16760) Row 24544862 (NC_000004.11:83655919:TT: 223/16760) Row 24544863 (NC_000004.11:83655919::T 10/16760)	-	Apr 26, 2021 (155)
44	8.3KJPN Submission ignored due to conflicting rows: Row 24544861 (NC_000004.11:83655919:T: 7119/16760) Row 24544862 (NC_000004.11:83655919:TT: 223/16760) Row 24544863 (NC_000004.11:83655919::T 10/16760)	-	Apr 26, 2021 (155)
45	14KJPN Submission ignored due to conflicting rows: Row 35000238 (NC_000004.12:82734766:T: 11918/28258) Row 35000239 (NC_000004.12:82734766:TT: 392/28258) Row 35000240 (NC_000004.12:82734766::T 13/28258)	-	Oct 17, 2022 (156)
46	14KJPN Submission ignored due to conflicting rows: Row 35000238 (NC_000004.12:82734766:T: 11918/28258) Row 35000239 (NC_000004.12:82734766:TT: 392/28258) Row 35000240 (NC_000004.12:82734766::T 13/28258)	-	Oct 17, 2022 (156)
47	14KJPN Submission ignored due to conflicting rows: Row 35000238 (NC_000004.12:82734766:T: 11918/28258) Row 35000239 (NC_000004.12:82734766:TT: 392/28258) Row 35000240 (NC_000004.12:82734766::T 13/28258)	-	Oct 17, 2022 (156)
48	ALFA	NC_000004.12 - 82734767	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4114701078	NC_000004.12:82734766:TTT:	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
12740989478	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss5166575555	NC_000004.11:83655919:TT:	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3712432498, ss4114701077, ss5259885250, ss5701163135	NC_000004.12:82734766:TT:	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
12740989478	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss288548807	NC_000004.10:83874943:T:	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
21945836, 4606904, ss663533428, ss1372394575, ss2995022373, ss3731322039, ss3790221271, ss3795096624, ss3828644320, ss3837763677, ss5166575554	NC_000004.11:83655919:T:	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3064977413, ss3065959725, ss3805177369, ss3843201382, ss4114701076, ss5259885248, ss5458571158, ss5701163134, ss5854308829	NC_000004.12:82734766:T:	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
12740989478	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3712432499	NC_000004.12:82734767:T:	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss5166575556	NC_000004.11:83655919::T	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss4114701074, ss5259885249, ss5458571159, ss5701163136	NC_000004.12:82734766::T	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
12740989478	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3712432500	NC_000004.12:82734768::T	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss4114701075	NC_000004.12:82734766::TT	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
12740989478	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3712432501	NC_000004.12:82734768::TTTTTTTTT	NC_000004.12:82734766:TTTTTTTTTTTT… NC_000004.12:82734766:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs200082291

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs200082291