Name: rs201852253
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs201852253

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr19:52529912-52529923 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₅ / del(T)₄ / delTTT / delTT…
del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄
Variation Type: Indel Insertion and Deletion
Frequency: del(T)₅=0.00000 (0/13670, ALFA)
del(T)₄=0.00000 (0/13670, ALFA)
delTTT=0.00000 (0/13670, ALFA) (+ 7 more)
delTT=0.00000 (0/13670, ALFA)
delT=0.00000 (0/13670, ALFA)
dupT=0.00000 (0/13670, ALFA)
dupTT=0.00000 (0/13670, ALFA)
dupTTT=0.00000 (0/13670, ALFA)
dup(T)₄=0.00000 (0/13670, ALFA)
delTTT=0.007 (4/598, NorthernSweden)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ZNF808 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	13670	TTTTTTTTTTTT=1.00000	TTTTTTT=0.00000, TTTTTTTT=0.00000, TTTTTTTTT=0.00000, TTTTTTTTTT=0.00000, TTTTTTTTTTT=0.00000, TTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTT=0.00000	1.0	N/A
European	Sub	9558	TTTTTTTTTTTT=1.0000	TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000	1.0	N/A
African	Sub	2704	TTTTTTTTTTTT=1.0000	TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000	1.0	N/A
African Others	Sub	100	TTTTTTTTTTTT=1.00	TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	N/A
African American	Sub	2604	TTTTTTTTTTTT=1.0000	TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000	1.0	N/A
Asian	Sub	102	TTTTTTTTTTTT=1.000	TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	N/A
East Asian	Sub	76	TTTTTTTTTTTT=1.00	TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	N/A
Other Asian	Sub	26	TTTTTTTTTTTT=1.00	TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	N/A
Latin American 1	Sub	144	TTTTTTTTTTTT=1.000	TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	N/A
Latin American 2	Sub	586	TTTTTTTTTTTT=1.000	TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	N/A
South Asian	Sub	92	TTTTTTTTTTTT=1.00	TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00	1.0	N/A
Other	Sub	484	TTTTTTTTTTTT=1.000	TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	13670	(T)₁₂=1.00000	del(T)₅=0.00000, del(T)₄=0.00000, delTTT=0.00000, delTT=0.00000, delT=0.00000, dupT=0.00000, dupTT=0.00000, dupTTT=0.00000, dup(T)₄=0.00000
Allele Frequency Aggregator	European	Sub	9558	(T)₁₂=1.0000	del(T)₅=0.0000, del(T)₄=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000, dup(T)₄=0.0000
Allele Frequency Aggregator	African	Sub	2704	(T)₁₂=1.0000	del(T)₅=0.0000, del(T)₄=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000, dup(T)₄=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	586	(T)₁₂=1.000	del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Other	Sub	484	(T)₁₂=1.000	del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Latin American 1	Sub	144	(T)₁₂=1.000	del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Asian	Sub	102	(T)₁₂=1.000	del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	South Asian	Sub	92	(T)₁₂=1.00	del(T)₅=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00
Northern Sweden	ACPOP	Study-wide	598	(T)₁₂=0.993	delTTT=0.007

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 19	NC_000019.10:g.52529919_52529923del
GRCh38.p14 chr 19	NC_000019.10:g.52529920_52529923del
GRCh38.p14 chr 19	NC_000019.10:g.52529921_52529923del
GRCh38.p14 chr 19	NC_000019.10:g.52529922_52529923del
GRCh38.p14 chr 19	NC_000019.10:g.52529923del
GRCh38.p14 chr 19	NC_000019.10:g.52529923dup
GRCh38.p14 chr 19	NC_000019.10:g.52529922_52529923dup
GRCh38.p14 chr 19	NC_000019.10:g.52529921_52529923dup
GRCh38.p14 chr 19	NC_000019.10:g.52529920_52529923dup
GRCh37.p13 chr 19	NC_000019.9:g.53033172_53033176del
GRCh37.p13 chr 19	NC_000019.9:g.53033173_53033176del
GRCh37.p13 chr 19	NC_000019.9:g.53033174_53033176del
GRCh37.p13 chr 19	NC_000019.9:g.53033175_53033176del
GRCh37.p13 chr 19	NC_000019.9:g.53033176del
GRCh37.p13 chr 19	NC_000019.9:g.53033176dup
GRCh37.p13 chr 19	NC_000019.9:g.53033175_53033176dup
GRCh37.p13 chr 19	NC_000019.9:g.53033174_53033176dup
GRCh37.p13 chr 19	NC_000019.9:g.53033173_53033176dup

Gene: ZNF808, zinc finger protein 808 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ZNF808 transcript variant 1	NM_001039886.4:c.-122+220… NM_001039886.4:c.-122+2208_-122+2212del	N/A	Intron Variant
ZNF808 transcript variant 2	NM_001321424.2:c.-122+201… NM_001321424.2:c.-122+2010_-122+2014del	N/A	Intron Variant
ZNF808 transcript variant 3	NM_001321425.2:c.-20+2208… NM_001321425.2:c.-20+2208_-20+2212del	N/A	Intron Variant
ZNF808 transcript variant 4	NM_001363550.2:c.-100+220… NM_001363550.2:c.-100+2208_-100+2212del	N/A	Intron Variant
ZNF808 transcript variant X5	XM_005258909.5:c.-202+220… XM_005258909.5:c.-202+2208_-202+2212del	N/A	Intron Variant
ZNF808 transcript variant X1	XM_024451506.2:c.	N/A	Genic Upstream Transcript Variant
ZNF808 transcript variant X3	XM_024451507.2:c.	N/A	Genic Upstream Transcript Variant
ZNF808 transcript variant X2	XM_047438802.1:c.	N/A	Genic Upstream Transcript Variant
ZNF808 transcript variant X4	XR_002958314.2:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₂=	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄
GRCh38.p14 chr 19	NC_000019.10:g.52529912_52529923=	NC_000019.10:g.52529919_52529923del	NC_000019.10:g.52529920_52529923del	NC_000019.10:g.52529921_52529923del	NC_000019.10:g.52529922_52529923del	NC_000019.10:g.52529923del	NC_000019.10:g.52529923dup	NC_000019.10:g.52529922_52529923dup	NC_000019.10:g.52529921_52529923dup	NC_000019.10:g.52529920_52529923dup
GRCh37.p13 chr 19	NC_000019.9:g.53033165_53033176=	NC_000019.9:g.53033172_53033176del	NC_000019.9:g.53033173_53033176del	NC_000019.9:g.53033174_53033176del	NC_000019.9:g.53033175_53033176del	NC_000019.9:g.53033176del	NC_000019.9:g.53033176dup	NC_000019.9:g.53033175_53033176dup	NC_000019.9:g.53033174_53033176dup	NC_000019.9:g.53033173_53033176dup
ZNF808 transcript variant 1	NM_001039886.3:c.-122+2201=	NM_001039886.3:c.-122+2208_-122+2212del	NM_001039886.3:c.-122+2209_-122+2212del	NM_001039886.3:c.-122+2210_-122+2212del	NM_001039886.3:c.-122+2211_-122+2212del	NM_001039886.3:c.-122+2212del	NM_001039886.3:c.-122+2212dup	NM_001039886.3:c.-122+2211_-122+2212dup	NM_001039886.3:c.-122+2210_-122+2212dup	NM_001039886.3:c.-122+2209_-122+2212dup
ZNF808 transcript variant 1	NM_001039886.4:c.-122+2201=	NM_001039886.4:c.-122+2208_-122+2212del	NM_001039886.4:c.-122+2209_-122+2212del	NM_001039886.4:c.-122+2210_-122+2212del	NM_001039886.4:c.-122+2211_-122+2212del	NM_001039886.4:c.-122+2212del	NM_001039886.4:c.-122+2212dup	NM_001039886.4:c.-122+2211_-122+2212dup	NM_001039886.4:c.-122+2210_-122+2212dup	NM_001039886.4:c.-122+2209_-122+2212dup
ZNF808 transcript variant 2	NM_001321424.2:c.-122+2003=	NM_001321424.2:c.-122+2010_-122+2014del	NM_001321424.2:c.-122+2011_-122+2014del	NM_001321424.2:c.-122+2012_-122+2014del	NM_001321424.2:c.-122+2013_-122+2014del	NM_001321424.2:c.-122+2014del	NM_001321424.2:c.-122+2014dup	NM_001321424.2:c.-122+2013_-122+2014dup	NM_001321424.2:c.-122+2012_-122+2014dup	NM_001321424.2:c.-122+2011_-122+2014dup
ZNF808 transcript variant 3	NM_001321425.2:c.-20+2201=	NM_001321425.2:c.-20+2208_-20+2212del	NM_001321425.2:c.-20+2209_-20+2212del	NM_001321425.2:c.-20+2210_-20+2212del	NM_001321425.2:c.-20+2211_-20+2212del	NM_001321425.2:c.-20+2212del	NM_001321425.2:c.-20+2212dup	NM_001321425.2:c.-20+2211_-20+2212dup	NM_001321425.2:c.-20+2210_-20+2212dup	NM_001321425.2:c.-20+2209_-20+2212dup
ZNF808 transcript variant 4	NM_001363550.2:c.-100+2201=	NM_001363550.2:c.-100+2208_-100+2212del	NM_001363550.2:c.-100+2209_-100+2212del	NM_001363550.2:c.-100+2210_-100+2212del	NM_001363550.2:c.-100+2211_-100+2212del	NM_001363550.2:c.-100+2212del	NM_001363550.2:c.-100+2212dup	NM_001363550.2:c.-100+2211_-100+2212dup	NM_001363550.2:c.-100+2210_-100+2212dup	NM_001363550.2:c.-100+2209_-100+2212dup
ZNF808 transcript variant X1	XM_005258906.1:c.-20+2201=	XM_005258906.1:c.-20+2208_-20+2212del	XM_005258906.1:c.-20+2209_-20+2212del	XM_005258906.1:c.-20+2210_-20+2212del	XM_005258906.1:c.-20+2211_-20+2212del	XM_005258906.1:c.-20+2212del	XM_005258906.1:c.-20+2212dup	XM_005258906.1:c.-20+2211_-20+2212dup	XM_005258906.1:c.-20+2210_-20+2212dup	XM_005258906.1:c.-20+2209_-20+2212dup
ZNF808 transcript variant X3	XM_005258908.1:c.-100+2201=	XM_005258908.1:c.-100+2208_-100+2212del	XM_005258908.1:c.-100+2209_-100+2212del	XM_005258908.1:c.-100+2210_-100+2212del	XM_005258908.1:c.-100+2211_-100+2212del	XM_005258908.1:c.-100+2212del	XM_005258908.1:c.-100+2212dup	XM_005258908.1:c.-100+2211_-100+2212dup	XM_005258908.1:c.-100+2210_-100+2212dup	XM_005258908.1:c.-100+2209_-100+2212dup
ZNF808 transcript variant X4	XM_005258909.1:c.-202+2201=	XM_005258909.1:c.-202+2208_-202+2212del	XM_005258909.1:c.-202+2209_-202+2212del	XM_005258909.1:c.-202+2210_-202+2212del	XM_005258909.1:c.-202+2211_-202+2212del	XM_005258909.1:c.-202+2212del	XM_005258909.1:c.-202+2212dup	XM_005258909.1:c.-202+2211_-202+2212dup	XM_005258909.1:c.-202+2210_-202+2212dup	XM_005258909.1:c.-202+2209_-202+2212dup
ZNF808 transcript variant X5	XM_005258909.5:c.-202+2201=	XM_005258909.5:c.-202+2208_-202+2212del	XM_005258909.5:c.-202+2209_-202+2212del	XM_005258909.5:c.-202+2210_-202+2212del	XM_005258909.5:c.-202+2211_-202+2212del	XM_005258909.5:c.-202+2212del	XM_005258909.5:c.-202+2212dup	XM_005258909.5:c.-202+2211_-202+2212dup	XM_005258909.5:c.-202+2210_-202+2212dup	XM_005258909.5:c.-202+2209_-202+2212dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

27 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GMI	ss289393856	May 04, 2012 (137)
2	ACPOP	ss3743127276	Jul 13, 2019 (153)
3	KOGIC	ss3981580438	Apr 27, 2020 (154)
4	KOGIC	ss3981580439	Apr 27, 2020 (154)
5	KOGIC	ss3981580440	Apr 27, 2020 (154)
6	KOGIC	ss3981580441	Apr 27, 2020 (154)
7	KOGIC	ss3981580442	Apr 27, 2020 (154)
8	GNOMAD	ss4332952865	Apr 27, 2021 (155)
9	GNOMAD	ss4332952870	Apr 27, 2021 (155)
10	GNOMAD	ss4332952871	Apr 27, 2021 (155)
11	GNOMAD	ss4332952872	Apr 27, 2021 (155)
12	GNOMAD	ss4332952873	Apr 27, 2021 (155)
13	GNOMAD	ss4332952874	Apr 27, 2021 (155)
14	GNOMAD	ss4332952875	Apr 27, 2021 (155)
15	GNOMAD	ss4332952876	Apr 27, 2021 (155)
16	TOMMO_GENOMICS	ss5228245481	Apr 27, 2021 (155)
17	TOMMO_GENOMICS	ss5228245482	Apr 27, 2021 (155)
18	TOMMO_GENOMICS	ss5228245483	Apr 27, 2021 (155)
19	TOMMO_GENOMICS	ss5228245484	Apr 27, 2021 (155)
20	HUGCELL_USP	ss5500082027	Oct 13, 2022 (156)
21	HUGCELL_USP	ss5500082029	Oct 13, 2022 (156)
22	HUGCELL_USP	ss5500082030	Oct 13, 2022 (156)
23	HUGCELL_USP	ss5500082031	Oct 13, 2022 (156)
24	TOMMO_GENOMICS	ss5787043388	Oct 13, 2022 (156)
25	TOMMO_GENOMICS	ss5787043389	Oct 13, 2022 (156)
26	TOMMO_GENOMICS	ss5787043391	Oct 13, 2022 (156)
27	TOMMO_GENOMICS	ss5787043392	Oct 13, 2022 (156)
28	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542906180 (NC_000019.10:52529911::T 212/75690) Row 542906185 (NC_000019.10:52529911::TT 1134/75646) Row 542906186 (NC_000019.10:52529911::TTT 112/75686)...	-	Apr 27, 2021 (155)
29	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542906180 (NC_000019.10:52529911::T 212/75690) Row 542906185 (NC_000019.10:52529911::TT 1134/75646) Row 542906186 (NC_000019.10:52529911::TTT 112/75686)...	-	Apr 27, 2021 (155)
30	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542906180 (NC_000019.10:52529911::T 212/75690) Row 542906185 (NC_000019.10:52529911::TT 1134/75646) Row 542906186 (NC_000019.10:52529911::TTT 112/75686)...	-	Apr 27, 2021 (155)
31	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542906180 (NC_000019.10:52529911::T 212/75690) Row 542906185 (NC_000019.10:52529911::TT 1134/75646) Row 542906186 (NC_000019.10:52529911::TTT 112/75686)...	-	Apr 27, 2021 (155)
32	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542906180 (NC_000019.10:52529911::T 212/75690) Row 542906185 (NC_000019.10:52529911::TT 1134/75646) Row 542906186 (NC_000019.10:52529911::TTT 112/75686)...	-	Apr 27, 2021 (155)
33	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542906180 (NC_000019.10:52529911::T 212/75690) Row 542906185 (NC_000019.10:52529911::TT 1134/75646) Row 542906186 (NC_000019.10:52529911::TTT 112/75686)...	-	Apr 27, 2021 (155)
34	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542906180 (NC_000019.10:52529911::T 212/75690) Row 542906185 (NC_000019.10:52529911::TT 1134/75646) Row 542906186 (NC_000019.10:52529911::TTT 112/75686)...	-	Apr 27, 2021 (155)
35	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542906180 (NC_000019.10:52529911::T 212/75690) Row 542906185 (NC_000019.10:52529911::TT 1134/75646) Row 542906186 (NC_000019.10:52529911::TTT 112/75686)...	-	Apr 27, 2021 (155)
36	Korean Genome Project Submission ignored due to conflicting rows: Row 37958439 (NC_000019.10:52529913:TTT: 88/1808) Row 37958440 (NC_000019.10:52529915:T: 10/1808) Row 37958441 (NC_000019.10:52529911:TTTTT: 6/1808)...	-	Apr 27, 2020 (154)
37	Korean Genome Project Submission ignored due to conflicting rows: Row 37958439 (NC_000019.10:52529913:TTT: 88/1808) Row 37958440 (NC_000019.10:52529915:T: 10/1808) Row 37958441 (NC_000019.10:52529911:TTTTT: 6/1808)...	-	Apr 27, 2020 (154)
38	Korean Genome Project Submission ignored due to conflicting rows: Row 37958439 (NC_000019.10:52529913:TTT: 88/1808) Row 37958440 (NC_000019.10:52529915:T: 10/1808) Row 37958441 (NC_000019.10:52529911:TTTTT: 6/1808)...	-	Apr 27, 2020 (154)
39	Korean Genome Project Submission ignored due to conflicting rows: Row 37958439 (NC_000019.10:52529913:TTT: 88/1808) Row 37958440 (NC_000019.10:52529915:T: 10/1808) Row 37958441 (NC_000019.10:52529911:TTTTT: 6/1808)...	-	Apr 27, 2020 (154)
40	Korean Genome Project Submission ignored due to conflicting rows: Row 37958439 (NC_000019.10:52529913:TTT: 88/1808) Row 37958440 (NC_000019.10:52529915:T: 10/1808) Row 37958441 (NC_000019.10:52529911:TTTTT: 6/1808)...	-	Apr 27, 2020 (154)
41	Northern Sweden	NC_000019.9 - 53033165	Jul 13, 2019 (153)
42	8.3KJPN Submission ignored due to conflicting rows: Row 86214788 (NC_000019.9:53033164:TTT: 435/16754) Row 86214789 (NC_000019.9:53033164::TT 210/16754) Row 86214790 (NC_000019.9:53033164::T 99/16754)...	-	Apr 27, 2021 (155)
43	8.3KJPN Submission ignored due to conflicting rows: Row 86214788 (NC_000019.9:53033164:TTT: 435/16754) Row 86214789 (NC_000019.9:53033164::TT 210/16754) Row 86214790 (NC_000019.9:53033164::T 99/16754)...	-	Apr 27, 2021 (155)
44	8.3KJPN Submission ignored due to conflicting rows: Row 86214788 (NC_000019.9:53033164:TTT: 435/16754) Row 86214789 (NC_000019.9:53033164::TT 210/16754) Row 86214790 (NC_000019.9:53033164::T 99/16754)...	-	Apr 27, 2021 (155)
45	8.3KJPN Submission ignored due to conflicting rows: Row 86214788 (NC_000019.9:53033164:TTT: 435/16754) Row 86214789 (NC_000019.9:53033164::TT 210/16754) Row 86214790 (NC_000019.9:53033164::T 99/16754)...	-	Apr 27, 2021 (155)
46	14KJPN Submission ignored due to conflicting rows: Row 120880492 (NC_000019.10:52529911::TT 373/28256) Row 120880493 (NC_000019.10:52529911:TTT: 704/28256) Row 120880495 (NC_000019.10:52529911:TTTTT: 60/28256)...	-	Oct 13, 2022 (156)
47	14KJPN Submission ignored due to conflicting rows: Row 120880492 (NC_000019.10:52529911::TT 373/28256) Row 120880493 (NC_000019.10:52529911:TTT: 704/28256) Row 120880495 (NC_000019.10:52529911:TTTTT: 60/28256)...	-	Oct 13, 2022 (156)
48	14KJPN Submission ignored due to conflicting rows: Row 120880492 (NC_000019.10:52529911::TT 373/28256) Row 120880493 (NC_000019.10:52529911:TTT: 704/28256) Row 120880495 (NC_000019.10:52529911:TTTTT: 60/28256)...	-	Oct 13, 2022 (156)
49	14KJPN Submission ignored due to conflicting rows: Row 120880492 (NC_000019.10:52529911::TT 373/28256) Row 120880493 (NC_000019.10:52529911:TTT: 704/28256) Row 120880495 (NC_000019.10:52529911:TTTTT: 60/28256)...	-	Oct 13, 2022 (156)
50	ALFA	NC_000019.10 - 52529912	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5228245484	NC_000019.9:53033164:TTTTT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTT	(self)
ss3981580440, ss4332952876, ss5500082030, ss5787043391	NC_000019.10:52529911:TTTTT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTT	(self)
ss4332952875	NC_000019.10:52529911:TTTT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTT	(self)
ss3981580442	NC_000019.10:52529912:TTTT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTT	(self)
ss289393856	NC_000019.8:57724976:TTT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTT	(self)
16412141, ss3743127276, ss5228245481	NC_000019.9:53033164:TTT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTT	(self)
ss4332952874, ss5500082027, ss5787043389	NC_000019.10:52529911:TTT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTT	(self)
ss3981580438	NC_000019.10:52529913:TTT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTT	(self)
ss4332952873	NC_000019.10:52529911:TT:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTT	(self)
ss4332952872	NC_000019.10:52529911:T:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss3981580439	NC_000019.10:52529915:T:	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss5228245483	NC_000019.9:53033164::T	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4332952865, ss5787043392	NC_000019.10:52529911::T	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss5228245482	NC_000019.9:53033164::TT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4332952870, ss5500082029, ss5787043388	NC_000019.10:52529911::TT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3981580441	NC_000019.10:52529916::TT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4332952871, ss5500082031	NC_000019.10:52529911::TTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
2910216976	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
183176891, ss3295876604	NC_000019.10:52529911::TTTT	NC_000019.10:52529911:TTTTTTTTTTTT… NC_000019.10:52529911:TTTTTTTTTTTT:TTTTTTTTTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs201852253

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs201852253