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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3078036

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr12:120763874-120763884 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
delAAA / delAA / delA / dupA / dup…

delAAA / delAA / delA / dupA / dupAA

Variation Type
Indel Insertion and Deletion
Frequency
(A)11=0.4725 (1821/3854, ALSPAC)
(A)11=0.2543 (853/3354, 1000G)
delAAA=0.0000 (0/1094, ALFA) (+ 4 more)
delAA=0.0000 (0/1094, ALFA)
delA=0.0000 (0/1094, ALFA)
dupA=0.0000 (0/1094, ALFA)
dupAA=0.0000 (0/1094, ALFA)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
SPPL3 : 3 Prime UTR Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 1094 AAAAAAAAAAA=1.0000 AAAAAAAA=0.0000, AAAAAAAAA=0.0000, AAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.0000 1.0 0.0 0.0 N/A
European Sub 1008 AAAAAAAAAAA=1.0000 AAAAAAAA=0.0000, AAAAAAAAA=0.0000, AAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.0000 1.0 0.0 0.0 N/A
African Sub 36 AAAAAAAAAAA=1.00 AAAAAAAA=0.00, AAAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
African Others Sub 0 AAAAAAAAAAA=0 AAAAAAAA=0, AAAAAAAAA=0, AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0 0 0 0 N/A
African American Sub 36 AAAAAAAAAAA=1.00 AAAAAAAA=0.00, AAAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
Asian Sub 4 AAAAAAAAAAA=1.0 AAAAAAAA=0.0, AAAAAAAAA=0.0, AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0 1.0 0.0 0.0 N/A
East Asian Sub 2 AAAAAAAAAAA=1.0 AAAAAAAA=0.0, AAAAAAAAA=0.0, AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0 1.0 0.0 0.0 N/A
Other Asian Sub 2 AAAAAAAAAAA=1.0 AAAAAAAA=0.0, AAAAAAAAA=0.0, AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0 1.0 0.0 0.0 N/A
Latin American 1 Sub 10 AAAAAAAAAAA=1.0 AAAAAAAA=0.0, AAAAAAAAA=0.0, AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0 1.0 0.0 0.0 N/A
Latin American 2 Sub 12 AAAAAAAAAAA=1.00 AAAAAAAA=0.00, AAAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
South Asian Sub 0 AAAAAAAAAAA=0 AAAAAAAA=0, AAAAAAAAA=0, AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0 0 0 0 N/A
Other Sub 24 AAAAAAAAAAA=1.00 AAAAAAAA=0.00, AAAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 (A)11=0.4725 delAA=0.5275
1000Genomes Global Study-wide 3354 (A)11=0.2543 delAA=0.7457
1000Genomes Europe Sub 865 (A)11=0.407 delAA=0.593
1000Genomes African Sub 701 (A)11=0.106 delAA=0.894
1000Genomes South Asian Sub 670 (A)11=0.260 delAA=0.740
1000Genomes East Asian Sub 561 (A)11=0.221 delAA=0.779
1000Genomes American Sub 557 (A)11=0.232 delAA=0.768
Allele Frequency Aggregator Total Global 1094 (A)11=1.0000 delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator European Sub 1008 (A)11=1.0000 delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000
Allele Frequency Aggregator African Sub 36 (A)11=1.00 delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator Other Sub 24 (A)11=1.00 delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator Latin American 2 Sub 12 (A)11=1.00 delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator Latin American 1 Sub 10 (A)11=1.0 delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator Asian Sub 4 (A)11=1.0 delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator South Asian Sub 0 (A)11=0 delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 12 NC_000012.12:g.120763882_120763884del
GRCh38.p14 chr 12 NC_000012.12:g.120763883_120763884del
GRCh38.p14 chr 12 NC_000012.12:g.120763884del
GRCh38.p14 chr 12 NC_000012.12:g.120763884dup
GRCh38.p14 chr 12 NC_000012.12:g.120763883_120763884dup
GRCh37.p13 chr 12 NC_000012.11:g.121201685_121201687del
GRCh37.p13 chr 12 NC_000012.11:g.121201686_121201687del
GRCh37.p13 chr 12 NC_000012.11:g.121201687del
GRCh37.p13 chr 12 NC_000012.11:g.121201687dup
GRCh37.p13 chr 12 NC_000012.11:g.121201686_121201687dup
Gene: SPPL3, signal peptide peptidase like 3 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
SPPL3 transcript NM_139015.5:c.*1115_*1125= N/A 3 Prime UTR Variant
SPPL3 transcript variant X1 XM_011537925.3:c.*1115_*1…

XM_011537925.3:c.*1115_*1125=

N/A 3 Prime UTR Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (A)11= delAAA delAA delA dupA dupAA
GRCh38.p14 chr 12 NC_000012.12:g.120763874_120763884= NC_000012.12:g.120763882_120763884del NC_000012.12:g.120763883_120763884del NC_000012.12:g.120763884del NC_000012.12:g.120763884dup NC_000012.12:g.120763883_120763884dup
GRCh37.p13 chr 12 NC_000012.11:g.121201677_121201687= NC_000012.11:g.121201685_121201687del NC_000012.11:g.121201686_121201687del NC_000012.11:g.121201687del NC_000012.11:g.121201687dup NC_000012.11:g.121201686_121201687dup
SPPL3 transcript NM_139015.5:c.*1115_*1125= NM_139015.5:c.*1123_*1125del NM_139015.5:c.*1124_*1125del NM_139015.5:c.*1125del NM_139015.5:c.*1125dup NM_139015.5:c.*1124_*1125dup
SPPL3 transcript NM_139015.4:c.*1115_*1125= NM_139015.4:c.*1123_*1125del NM_139015.4:c.*1124_*1125del NM_139015.4:c.*1125del NM_139015.4:c.*1125dup NM_139015.4:c.*1124_*1125dup
SPPL3 transcript variant X1 XM_011537925.3:c.*1115_*1125= XM_011537925.3:c.*1123_*1125del XM_011537925.3:c.*1124_*1125del XM_011537925.3:c.*1125del XM_011537925.3:c.*1125dup XM_011537925.3:c.*1124_*1125dup
SPPL3 transcript variant X1 XM_011537925.2:c.*1115_*1125= XM_011537925.2:c.*1123_*1125del XM_011537925.2:c.*1124_*1125del XM_011537925.2:c.*1125del XM_011537925.2:c.*1125dup XM_011537925.2:c.*1124_*1125dup
SPPL3 transcript variant X2 XM_011537925.1:c.*1115_*1125= XM_011537925.1:c.*1123_*1125del XM_011537925.1:c.*1124_*1125del XM_011537925.1:c.*1125del XM_011537925.1:c.*1125dup XM_011537925.1:c.*1124_*1125dup
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

75 SubSNP, 21 Frequency submissions
No Submitter Submission ID Date (Build)
1 TSC-CSHL ss4309465 Jan 05, 2002 (102)
2 DEVINE_LAB ss8061439 Mar 15, 2016 (147)
3 ABI ss40109879 Mar 14, 2006 (137)
4 ABI ss40258750 Mar 14, 2006 (126)
5 HGSV ss81759598 Sep 08, 2015 (146)
6 HGSV ss82699322 Sep 08, 2015 (146)
7 HGSV ss83792689 Sep 08, 2015 (146)
8 DEVINE_LAB ss94303445 Mar 15, 2016 (147)
9 BCMHGSC_JDW ss103540418 Dec 06, 2013 (138)
10 BGI ss104692606 Mar 15, 2016 (147)
11 BGI ss105465460 Mar 15, 2016 (147)
12 GMI ss155503310 Mar 15, 2016 (147)
13 BUSHMAN ss193301671 Mar 15, 2016 (147)
14 GMI ss287898896 Mar 15, 2016 (147)
15 GMI ss289156278 May 04, 2012 (137)
16 GMI ss289156279 May 04, 2012 (137)
17 PJP ss294778212 Aug 21, 2014 (142)
18 PJP ss294778213 May 09, 2011 (135)
19 PJP ss294778214 May 09, 2011 (134)
20 BILGI_BIOE ss666585906 Apr 25, 2013 (138)
21 1000GENOMES ss1372710149 Aug 21, 2014 (142)
22 1000GENOMES ss1372710150 Aug 21, 2014 (142)
23 1000GENOMES ss1372710151 Aug 21, 2014 (142)
24 DDI ss1536745271 Apr 01, 2015 (144)
25 EVA_UK10K_ALSPAC ss1707651962 Apr 01, 2015 (144)
26 EVA_UK10K_TWINSUK ss1707652343 Apr 01, 2015 (144)
27 EVA_UK10K_TWINSUK ss1710583958 Apr 01, 2015 (144)
28 EVA_UK10K_ALSPAC ss1710583986 Apr 01, 2015 (144)
29 HAMMER_LAB ss1807450921 Sep 08, 2015 (146)
30 HAMMER_LAB ss1807450922 Sep 08, 2015 (146)
31 TMC_SNPDB ss1997056925 Jul 19, 2016 (147)
32 TMC_SNPDB ss1997056927 Jul 19, 2016 (147)
33 SWEGEN ss3010461868 Nov 08, 2017 (151)
34 BIOINF_KMB_FNS_UNIBA ss3645280193 Oct 12, 2018 (152)
35 BIOINF_KMB_FNS_UNIBA ss3645280194 Oct 12, 2018 (152)
36 BIOINF_KMB_FNS_UNIBA ss3645280195 Oct 12, 2018 (152)
37 URBANLAB ss3649935528 Oct 12, 2018 (152)
38 EVA_DECODE ss3694607950 Jul 13, 2019 (153)
39 EVA_DECODE ss3694607951 Jul 13, 2019 (153)
40 EVA_DECODE ss3694607952 Jul 13, 2019 (153)
41 ACPOP ss3739443229 Jul 13, 2019 (153)
42 ACPOP ss3739443230 Jul 13, 2019 (153)
43 ACPOP ss3739443231 Jul 13, 2019 (153)
44 PACBIO ss3787354934 Jul 13, 2019 (153)
45 PACBIO ss3792433842 Jul 13, 2019 (153)
46 PACBIO ss3797316997 Jul 13, 2019 (153)
47 KHV_HUMAN_GENOMES ss3816379277 Jul 13, 2019 (153)
48 KHV_HUMAN_GENOMES ss3816379278 Jul 13, 2019 (153)
49 KHV_HUMAN_GENOMES ss3816379279 Jul 13, 2019 (153)
50 EVA ss3845740865 Apr 27, 2020 (154)
51 KOGIC ss3972879831 Apr 27, 2020 (154)
52 KOGIC ss3972879832 Apr 27, 2020 (154)
53 FSA-LAB ss3984039257 Apr 26, 2021 (155)
54 EVA ss3986061270 Apr 26, 2021 (155)
55 GNOMAD ss4260221345 Apr 26, 2021 (155)
56 GNOMAD ss4260221346 Apr 26, 2021 (155)
57 GNOMAD ss4260221347 Apr 26, 2021 (155)
58 GNOMAD ss4260221348 Apr 26, 2021 (155)
59 GNOMAD ss4260221349 Apr 26, 2021 (155)
60 TOMMO_GENOMICS ss5208487734 Apr 26, 2021 (155)
61 TOMMO_GENOMICS ss5208487735 Apr 26, 2021 (155)
62 TOMMO_GENOMICS ss5208487736 Apr 26, 2021 (155)
63 1000G_HIGH_COVERAGE ss5292478868 Oct 16, 2022 (156)
64 1000G_HIGH_COVERAGE ss5292478869 Oct 16, 2022 (156)
65 1000G_HIGH_COVERAGE ss5292478870 Oct 16, 2022 (156)
66 1000G_HIGH_COVERAGE ss5292478871 Oct 16, 2022 (156)
67 HUGCELL_USP ss5487059280 Oct 16, 2022 (156)
68 HUGCELL_USP ss5487059281 Oct 16, 2022 (156)
69 HUGCELL_USP ss5487059282 Oct 16, 2022 (156)
70 TOMMO_GENOMICS ss5758909523 Oct 16, 2022 (156)
71 TOMMO_GENOMICS ss5758909524 Oct 16, 2022 (156)
72 TOMMO_GENOMICS ss5758909525 Oct 16, 2022 (156)
73 EVA ss5838609249 Oct 16, 2022 (156)
74 EVA ss5838609250 Oct 16, 2022 (156)
75 EVA ss5838609251 Oct 16, 2022 (156)
76 1000Genomes NC_000012.11 - 121201677 Oct 12, 2018 (152)
77 The Avon Longitudinal Study of Parents and Children NC_000012.11 - 121201677 Oct 12, 2018 (152)
78 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 421343795 (NC_000012.12:120763873::A 3186/129732)
Row 421343796 (NC_000012.12:120763873::AA 7/129796)
Row 421343797 (NC_000012.12:120763873:A: 25328/129606)...

- Apr 26, 2021 (155)
79 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 421343795 (NC_000012.12:120763873::A 3186/129732)
Row 421343796 (NC_000012.12:120763873::AA 7/129796)
Row 421343797 (NC_000012.12:120763873:A: 25328/129606)...

- Apr 26, 2021 (155)
80 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 421343795 (NC_000012.12:120763873::A 3186/129732)
Row 421343796 (NC_000012.12:120763873::AA 7/129796)
Row 421343797 (NC_000012.12:120763873:A: 25328/129606)...

- Apr 26, 2021 (155)
81 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 421343795 (NC_000012.12:120763873::A 3186/129732)
Row 421343796 (NC_000012.12:120763873::AA 7/129796)
Row 421343797 (NC_000012.12:120763873:A: 25328/129606)...

- Apr 26, 2021 (155)
82 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 421343795 (NC_000012.12:120763873::A 3186/129732)
Row 421343796 (NC_000012.12:120763873::AA 7/129796)
Row 421343797 (NC_000012.12:120763873:A: 25328/129606)...

- Apr 26, 2021 (155)
83 Korean Genome Project

Submission ignored due to conflicting rows:
Row 29257832 (NC_000012.12:120763873:AA: 1012/1832)
Row 29257833 (NC_000012.12:120763874:A: 561/1832)

- Apr 27, 2020 (154)
84 Korean Genome Project

Submission ignored due to conflicting rows:
Row 29257832 (NC_000012.12:120763873:AA: 1012/1832)
Row 29257833 (NC_000012.12:120763874:A: 561/1832)

- Apr 27, 2020 (154)
85 Northern Sweden

Submission ignored due to conflicting rows:
Row 12728094 (NC_000012.11:121201676:AA: 288/560)
Row 12728095 (NC_000012.11:121201676:A: 44/560)
Row 12728096 (NC_000012.11:121201676::A 10/560)

- Jul 13, 2019 (153)
86 Northern Sweden

Submission ignored due to conflicting rows:
Row 12728094 (NC_000012.11:121201676:AA: 288/560)
Row 12728095 (NC_000012.11:121201676:A: 44/560)
Row 12728096 (NC_000012.11:121201676::A 10/560)

- Jul 13, 2019 (153)
87 Northern Sweden

Submission ignored due to conflicting rows:
Row 12728094 (NC_000012.11:121201676:AA: 288/560)
Row 12728095 (NC_000012.11:121201676:A: 44/560)
Row 12728096 (NC_000012.11:121201676::A 10/560)

- Jul 13, 2019 (153)
88 8.3KJPN

Submission ignored due to conflicting rows:
Row 66457041 (NC_000012.11:121201676:AA: 8592/16760)
Row 66457042 (NC_000012.11:121201676:A: 4693/16760)
Row 66457043 (NC_000012.11:121201676::A 27/16760)

- Apr 26, 2021 (155)
89 8.3KJPN

Submission ignored due to conflicting rows:
Row 66457041 (NC_000012.11:121201676:AA: 8592/16760)
Row 66457042 (NC_000012.11:121201676:A: 4693/16760)
Row 66457043 (NC_000012.11:121201676::A 27/16760)

- Apr 26, 2021 (155)
90 8.3KJPN

Submission ignored due to conflicting rows:
Row 66457041 (NC_000012.11:121201676:AA: 8592/16760)
Row 66457042 (NC_000012.11:121201676:A: 4693/16760)
Row 66457043 (NC_000012.11:121201676::A 27/16760)

- Apr 26, 2021 (155)
91 14KJPN

Submission ignored due to conflicting rows:
Row 92746627 (NC_000012.12:120763873:AA: 14519/28258)
Row 92746628 (NC_000012.12:120763873:A: 7932/28258)
Row 92746629 (NC_000012.12:120763873::A 42/28258)

- Oct 16, 2022 (156)
92 14KJPN

Submission ignored due to conflicting rows:
Row 92746627 (NC_000012.12:120763873:AA: 14519/28258)
Row 92746628 (NC_000012.12:120763873:A: 7932/28258)
Row 92746629 (NC_000012.12:120763873::A 42/28258)

- Oct 16, 2022 (156)
93 14KJPN

Submission ignored due to conflicting rows:
Row 92746627 (NC_000012.12:120763873:AA: 14519/28258)
Row 92746628 (NC_000012.12:120763873:A: 7932/28258)
Row 92746629 (NC_000012.12:120763873::A 42/28258)

- Oct 16, 2022 (156)
94 UK 10K study - Twins - Oct 12, 2018 (152)
95 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 33180902 (NC_000012.11:121201676:AA: 1933/3708)
Row 33180903 (NC_000012.11:121201677:A: 315/3708)

- Apr 27, 2020 (154)
96 ALFA NC_000012.12 - 120763874 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs148545785 Sep 17, 2011 (135)
rs199631960 May 11, 2012 (137)
rs77605918 Oct 17, 2011 (136)
rs34734203 May 04, 2012 (137)
rs35071578 May 23, 2006 (127)
rs66535729 Jul 30, 2012 (137)
rs112933056 Oct 12, 2011 (135)
rs201513670 May 11, 2012 (137)
rs33966367 May 23, 2006 (127)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss3984039257 NC_000012.11:121201676:AAA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAA

(self)
ss4260221349, ss5292478871 NC_000012.12:120763873:AAA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAA

(self)
2676191121 NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAA

NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAA

(self)
ss4309465 NT_009775.17:11778214:AAA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAA

(self)
ss81759598, ss82699322, ss83792689 NC_000012.9:119664405:AA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
ss289156279, ss294778212 NC_000012.10:119686059:AA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
ss294778213 NC_000012.10:119686068:AA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
59735035, 33180902, ss666585906, ss1372710149, ss1536745271, ss1707651962, ss1707652343, ss1807450922, ss3010461868, ss3739443229, ss3787354934, ss3792433842, ss3797316997, ss5208487734, ss5838609249 NC_000012.11:121201676:AA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
ss3645280193, ss3649935528, ss3694607952, ss3816379277, ss3972879831, ss4260221348, ss5292478870, ss5487059281, ss5758909523 NC_000012.12:120763873:AA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
2676191121 NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
ss8061439, ss193301671, ss287898896 NT_009775.17:11778206:AA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
ss104692606, ss105465460 NT_009775.17:11778214:AA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
ss94303445, ss103540418, ss155503310 NT_009775.17:11778215:AA: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAA

(self)
ss289156278 NC_000012.10:119686059:A: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

(self)
ss294778214 NC_000012.10:119686069:A: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

(self)
ss1807450921, ss3739443230, ss3986061270, ss5208487735, ss5838609251 NC_000012.11:121201676:A: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

(self)
ss1372710150, ss1710583958, ss1710583986, ss1997056927 NC_000012.11:121201677:A: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

(self)
ss3645280194, ss3845740865, ss4260221347, ss5292478868, ss5487059280, ss5758909524 NC_000012.12:120763873:A: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

(self)
2676191121 NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

(self)
ss3694607951, ss3816379279, ss3972879832 NC_000012.12:120763874:A: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

(self)
ss40109879, ss40258750 NT_009775.17:11778206:A: NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAA

(self)
ss3739443231, ss5208487736, ss5838609250 NC_000012.11:121201676::A NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAA

(self)
ss1372710151, ss1997056925 NC_000012.11:121201678::A NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAA

(self)
ss3645280195, ss4260221345, ss5292478869, ss5487059282, ss5758909525 NC_000012.12:120763873::A NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAA

(self)
2676191121 NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAA

NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAA

(self)
ss3694607950, ss3816379278 NC_000012.12:120763875::A NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAA

(self)
ss4260221346 NC_000012.12:120763873::AA NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAAA

(self)
2676191121 NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAAA

NC_000012.12:120763873:AAAAAAAAAAA…

NC_000012.12:120763873:AAAAAAAAAAA:AAAAAAAAAAAAA

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs3078036

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d