Name: rs34120230
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34120230

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:111919974-111919985 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(C)₇ / del(C)₅ / del(C)₄ / delC…
del(C)₇ / del(C)₅ / del(C)₄ / delCCC / delCC / delC / dupC / dupCC
Variation Type: Indel Insertion and Deletion
Frequency: delCCC=0.3707 (2181/5884, ALFA)
delCCC=0.3017 (1511/5008, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: NREP : Intron Variant
NREP-AS1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	5884	CCCCCCCCCCCC=0.5850	CCCCCCC=0.0000, CCCCCCCC=0.0134, CCCCCCCCC=0.3707, CCCCCCCCCC=0.0153, CCCCCCCCCCC=0.0121, CCCCCCCCCCCCC=0.0036, CCCCCCCCCCCCCC=0.0000	0.448098	0.217584	0.334318	32
European	Sub	5516	CCCCCCCCCCCC=0.5582	CCCCCCC=0.0000, CCCCCCCC=0.0140, CCCCCCCCC=0.3949, CCCCCCCCCC=0.0163, CCCCCCCCCCC=0.0129, CCCCCCCCCCCCC=0.0038, CCCCCCCCCCCCCC=0.0000	0.409271	0.23336	0.357369	32
African	Sub	100	CCCCCCCCCCCC=1.00	CCCCCCC=0.00, CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
African Others	Sub	0	CCCCCCCCCCCC=0	CCCCCCC=0, CCCCCCCC=0, CCCCCCCCC=0, CCCCCCCCCC=0, CCCCCCCCCCC=0, CCCCCCCCCCCCC=0, CCCCCCCCCCCCCC=0	0	0	0	N/A
African American	Sub	100	CCCCCCCCCCCC=1.00	CCCCCCC=0.00, CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Asian	Sub	20	CCCCCCCCCCCC=1.00	CCCCCCC=0.00, CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	14	CCCCCCCCCCCC=1.00	CCCCCCC=0.00, CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	6	CCCCCCCCCCCC=1.0	CCCCCCC=0.0, CCCCCCCC=0.0, CCCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	20	CCCCCCCCCCCC=1.00	CCCCCCC=0.00, CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	114	CCCCCCCCCCCC=1.000	CCCCCCC=0.000, CCCCCCCC=0.000, CCCCCCCCC=0.000, CCCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCC=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	30	CCCCCCCCCCCC=1.00	CCCCCCC=0.00, CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Other	Sub	84	CCCCCCCCCCCC=0.94	CCCCCCC=0.00, CCCCCCCC=0.02, CCCCCCCCC=0.04, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00	0.926829	0.0	0.073171	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	5884	(C)₁₂=0.5850	del(C)₅=0.0000, del(C)₄=0.0134, delCCC=0.3707, delCC=0.0153, delC=0.0121, dupC=0.0036, dupCC=0.0000
Allele Frequency Aggregator	European	Sub	5516	(C)₁₂=0.5582	del(C)₅=0.0000, del(C)₄=0.0140, delCCC=0.3949, delCC=0.0163, delC=0.0129, dupC=0.0038, dupCC=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	114	(C)₁₂=1.000	del(C)₅=0.000, del(C)₄=0.000, delCCC=0.000, delCC=0.000, delC=0.000, dupC=0.000, dupCC=0.000
Allele Frequency Aggregator	African	Sub	100	(C)₁₂=1.00	del(C)₅=0.00, del(C)₄=0.00, delCCC=0.00, delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00
Allele Frequency Aggregator	Other	Sub	84	(C)₁₂=0.94	del(C)₅=0.00, del(C)₄=0.02, delCCC=0.04, delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00
Allele Frequency Aggregator	South Asian	Sub	30	(C)₁₂=1.00	del(C)₅=0.00, del(C)₄=0.00, delCCC=0.00, delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00
Allele Frequency Aggregator	Latin American 1	Sub	20	(C)₁₂=1.00	del(C)₅=0.00, del(C)₄=0.00, delCCC=0.00, delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00
Allele Frequency Aggregator	Asian	Sub	20	(C)₁₂=1.00	del(C)₅=0.00, del(C)₄=0.00, delCCC=0.00, delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00
1000Genomes	Global	Study-wide	5008	(C)₁₂=0.6983	delCCC=0.3017
1000Genomes	African	Sub	1322	(C)₁₂=0.6611	delCCC=0.3389
1000Genomes	East Asian	Sub	1008	(C)₁₂=0.8829	delCCC=0.1171
1000Genomes	Europe	Sub	1006	(C)₁₂=0.5606	delCCC=0.4394
1000Genomes	South Asian	Sub	978	(C)₁₂=0.731	delCCC=0.269
1000Genomes	American	Sub	694	(C)₁₂=0.654	delCCC=0.346

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.111919979_111919985del
GRCh38.p14 chr 5	NC_000005.10:g.111919981_111919985del
GRCh38.p14 chr 5	NC_000005.10:g.111919982_111919985del
GRCh38.p14 chr 5	NC_000005.10:g.111919983_111919985del
GRCh38.p14 chr 5	NC_000005.10:g.111919984_111919985del
GRCh38.p14 chr 5	NC_000005.10:g.111919985del
GRCh38.p14 chr 5	NC_000005.10:g.111919985dup
GRCh38.p14 chr 5	NC_000005.10:g.111919984_111919985dup
GRCh37.p13 chr 5	NC_000005.9:g.111255676_111255682del
GRCh37.p13 chr 5	NC_000005.9:g.111255678_111255682del
GRCh37.p13 chr 5	NC_000005.9:g.111255679_111255682del
GRCh37.p13 chr 5	NC_000005.9:g.111255680_111255682del
GRCh37.p13 chr 5	NC_000005.9:g.111255681_111255682del
GRCh37.p13 chr 5	NC_000005.9:g.111255682del
GRCh37.p13 chr 5	NC_000005.9:g.111255682dup
GRCh37.p13 chr 5	NC_000005.9:g.111255681_111255682dup

Gene: NREP, neuronal regeneration related protein (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
NREP transcript variant 2	NM_001142474.2:c.105+5532… NM_001142474.2:c.105+55324_105+55330del	N/A	Intron Variant
NREP transcript variant 3	NM_001142475.2:c.135+5529… NM_001142475.2:c.135+55294_135+55300del	N/A	Intron Variant
NREP transcript variant 4	NM_001142476.1:c.	N/A	Genic Upstream Transcript Variant
NREP transcript variant 5	NM_001142477.1:c.	N/A	Genic Upstream Transcript Variant
NREP transcript variant 6	NM_001142478.2:c.	N/A	Genic Upstream Transcript Variant
NREP transcript variant 7	NM_001142479.1:c.	N/A	Genic Upstream Transcript Variant
NREP transcript variant 8	NM_001142480.1:c.	N/A	Genic Upstream Transcript Variant
NREP transcript variant 9	NM_001142481.1:c.	N/A	Genic Upstream Transcript Variant
NREP transcript variant 10	NM_001142482.1:c.	N/A	Genic Upstream Transcript Variant
NREP transcript variant 11	NM_001142483.1:c.	N/A	Genic Upstream Transcript Variant
NREP transcript variant 1	NM_004772.4:c.	N/A	Genic Upstream Transcript Variant

Gene: NREP-AS1, NREP antisense RNA 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
NREP-AS1 transcript	NR_046678.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(C)₁₂=	del(C)₇	del(C)₅	del(C)₄	delCCC	delCC	delC	dupC	dupCC
GRCh38.p14 chr 5	NC_000005.10:g.111919974_111919985=	NC_000005.10:g.111919979_111919985del	NC_000005.10:g.111919981_111919985del	NC_000005.10:g.111919982_111919985del	NC_000005.10:g.111919983_111919985del	NC_000005.10:g.111919984_111919985del	NC_000005.10:g.111919985del	NC_000005.10:g.111919985dup	NC_000005.10:g.111919984_111919985dup
GRCh37.p13 chr 5	NC_000005.9:g.111255671_111255682=	NC_000005.9:g.111255676_111255682del	NC_000005.9:g.111255678_111255682del	NC_000005.9:g.111255679_111255682del	NC_000005.9:g.111255680_111255682del	NC_000005.9:g.111255681_111255682del	NC_000005.9:g.111255682del	NC_000005.9:g.111255682dup	NC_000005.9:g.111255681_111255682dup
NREP transcript variant 2	NM_001142474.1:c.105+55330=	NM_001142474.1:c.105+55324_105+55330del	NM_001142474.1:c.105+55326_105+55330del	NM_001142474.1:c.105+55327_105+55330del	NM_001142474.1:c.105+55328_105+55330del	NM_001142474.1:c.105+55329_105+55330del	NM_001142474.1:c.105+55330del	NM_001142474.1:c.105+55330dup	NM_001142474.1:c.105+55329_105+55330dup
NREP transcript variant 2	NM_001142474.2:c.105+55330=	NM_001142474.2:c.105+55324_105+55330del	NM_001142474.2:c.105+55326_105+55330del	NM_001142474.2:c.105+55327_105+55330del	NM_001142474.2:c.105+55328_105+55330del	NM_001142474.2:c.105+55329_105+55330del	NM_001142474.2:c.105+55330del	NM_001142474.2:c.105+55330dup	NM_001142474.2:c.105+55329_105+55330dup
NREP transcript variant 3	NM_001142475.1:c.135+55300=	NM_001142475.1:c.135+55294_135+55300del	NM_001142475.1:c.135+55296_135+55300del	NM_001142475.1:c.135+55297_135+55300del	NM_001142475.1:c.135+55298_135+55300del	NM_001142475.1:c.135+55299_135+55300del	NM_001142475.1:c.135+55300del	NM_001142475.1:c.135+55300dup	NM_001142475.1:c.135+55299_135+55300dup
NREP transcript variant 3	NM_001142475.2:c.135+55300=	NM_001142475.2:c.135+55294_135+55300del	NM_001142475.2:c.135+55296_135+55300del	NM_001142475.2:c.135+55297_135+55300del	NM_001142475.2:c.135+55298_135+55300del	NM_001142475.2:c.135+55299_135+55300del	NM_001142475.2:c.135+55300del	NM_001142475.2:c.135+55300dup	NM_001142475.2:c.135+55299_135+55300dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

67 SubSNP, 32 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss80919474	Sep 08, 2015 (146)
2	HGSV	ss80923775	Sep 08, 2015 (146)
3	BUSHMAN	ss193817341	Mar 15, 2016 (151)
4	GMI	ss287778894	May 09, 2011 (134)
5	GMI	ss288651626	May 04, 2012 (138)
6	GMI	ss288651627	May 04, 2012 (137)
7	TISHKOFF	ss554210387	Apr 25, 2013 (138)
8	TISHKOFF	ss554210389	Apr 25, 2013 (138)
9	TISHKOFF	ss554210392	Apr 25, 2013 (138)
10	BILGI_BIOE	ss666323826	Apr 25, 2013 (138)
11	1000GENOMES	ss1374307626	Aug 21, 2014 (142)
12	DDI	ss1536475296	Apr 01, 2015 (144)
13	HAMMER_LAB	ss1804015178	Sep 08, 2015 (146)
14	HAMMER_LAB	ss1804015179	Sep 08, 2015 (151)
15	SWEGEN	ss2997554150	Nov 08, 2017 (151)
16	MCHAISSO	ss3065046065	Nov 08, 2017 (151)
17	BEROUKHIMLAB	ss3644192776	Oct 12, 2018 (152)
18	BIOINF_KMB_FNS_UNIBA	ss3645899702	Oct 12, 2018 (152)
19	BIOINF_KMB_FNS_UNIBA	ss3645899703	Oct 12, 2018 (152)
20	URBANLAB	ss3648139680	Oct 12, 2018 (152)
21	EVA_DECODE	ss3715415547	Jul 13, 2019 (153)
22	EVA_DECODE	ss3715415548	Jul 13, 2019 (153)
23	EVA_DECODE	ss3715415549	Jul 13, 2019 (153)
24	EVA_DECODE	ss3715415550	Jul 13, 2019 (153)
25	EVA_DECODE	ss3715415551	Jul 13, 2019 (153)
26	ACPOP	ss3732687234	Jul 13, 2019 (153)
27	ACPOP	ss3732687235	Jul 13, 2019 (153)
28	ACPOP	ss3732687236	Jul 13, 2019 (153)
29	ACPOP	ss3732687237	Jul 13, 2019 (153)
30	ACPOP	ss3732687238	Jul 13, 2019 (153)
31	KHV_HUMAN_GENOMES	ss3807053358	Jul 13, 2019 (153)
32	KOGIC	ss3957383396	Apr 26, 2020 (154)
33	KOGIC	ss3957383397	Apr 26, 2020 (154)
34	KOGIC	ss3957383398	Apr 26, 2020 (154)
35	KOGIC	ss3957383399	Apr 26, 2020 (154)
36	KOGIC	ss3957383400	Apr 26, 2020 (154)
37	GNOMAD	ss4126756131	Apr 26, 2021 (155)
38	GNOMAD	ss4126756132	Apr 26, 2021 (155)
39	GNOMAD	ss4126756133	Apr 26, 2021 (155)
40	GNOMAD	ss4126756134	Apr 26, 2021 (155)
41	GNOMAD	ss4126756135	Apr 26, 2021 (155)
42	GNOMAD	ss4126756136	Apr 26, 2021 (155)
43	GNOMAD	ss4126756137	Apr 26, 2021 (155)
44	TOMMO_GENOMICS	ss5173483722	Apr 26, 2021 (155)
45	TOMMO_GENOMICS	ss5173483723	Apr 26, 2021 (155)
46	TOMMO_GENOMICS	ss5173483724	Apr 26, 2021 (155)
47	TOMMO_GENOMICS	ss5173483725	Apr 26, 2021 (155)
48	TOMMO_GENOMICS	ss5173483726	Apr 26, 2021 (155)
49	TOMMO_GENOMICS	ss5173483727	Apr 26, 2021 (155)
50	1000G_HIGH_COVERAGE	ss5265320369	Oct 13, 2022 (156)
51	1000G_HIGH_COVERAGE	ss5265320370	Oct 13, 2022 (156)
52	1000G_HIGH_COVERAGE	ss5265320371	Oct 13, 2022 (156)
53	1000G_HIGH_COVERAGE	ss5265320372	Oct 13, 2022 (156)
54	1000G_HIGH_COVERAGE	ss5265320373	Oct 13, 2022 (156)
55	HUGCELL_USP	ss5463342882	Oct 13, 2022 (156)
56	HUGCELL_USP	ss5463342883	Oct 13, 2022 (156)
57	HUGCELL_USP	ss5463342884	Oct 13, 2022 (156)
58	HUGCELL_USP	ss5463342885	Oct 13, 2022 (156)
59	TOMMO_GENOMICS	ss5710374345	Oct 13, 2022 (156)
60	TOMMO_GENOMICS	ss5710374346	Oct 13, 2022 (156)
61	TOMMO_GENOMICS	ss5710374347	Oct 13, 2022 (156)
62	TOMMO_GENOMICS	ss5710374348	Oct 13, 2022 (156)
63	TOMMO_GENOMICS	ss5710374349	Oct 13, 2022 (156)
64	TOMMO_GENOMICS	ss5710374350	Oct 13, 2022 (156)
65	EVA	ss5835440550	Oct 13, 2022 (156)
66	EVA	ss5835440551	Oct 13, 2022 (156)
67	EVA	ss5835440552	Oct 13, 2022 (156)
68	1000Genomes	NC_000005.9 - 111255671	Oct 12, 2018 (152)
69	gnomAD - Genomes Submission ignored due to conflicting rows: Row 200033439 (NC_000005.10:111919973::C 267/118914) Row 200033440 (NC_000005.10:111919973::CC 0/118982) Row 200033442 (NC_000005.10:111919973:C: 10910/118054)...	-	Apr 26, 2021 (155)
70	gnomAD - Genomes Submission ignored due to conflicting rows: Row 200033439 (NC_000005.10:111919973::C 267/118914) Row 200033440 (NC_000005.10:111919973::CC 0/118982) Row 200033442 (NC_000005.10:111919973:C: 10910/118054)...	-	Apr 26, 2021 (155)
71	gnomAD - Genomes Submission ignored due to conflicting rows: Row 200033439 (NC_000005.10:111919973::C 267/118914) Row 200033440 (NC_000005.10:111919973::CC 0/118982) Row 200033442 (NC_000005.10:111919973:C: 10910/118054)...	-	Apr 26, 2021 (155)
72	gnomAD - Genomes Submission ignored due to conflicting rows: Row 200033439 (NC_000005.10:111919973::C 267/118914) Row 200033440 (NC_000005.10:111919973::CC 0/118982) Row 200033442 (NC_000005.10:111919973:C: 10910/118054)...	-	Apr 26, 2021 (155)
73	gnomAD - Genomes Submission ignored due to conflicting rows: Row 200033439 (NC_000005.10:111919973::C 267/118914) Row 200033440 (NC_000005.10:111919973::CC 0/118982) Row 200033442 (NC_000005.10:111919973:C: 10910/118054)...	-	Apr 26, 2021 (155)
74	gnomAD - Genomes Submission ignored due to conflicting rows: Row 200033439 (NC_000005.10:111919973::C 267/118914) Row 200033440 (NC_000005.10:111919973::CC 0/118982) Row 200033442 (NC_000005.10:111919973:C: 10910/118054)...	-	Apr 26, 2021 (155)
75	gnomAD - Genomes Submission ignored due to conflicting rows: Row 200033439 (NC_000005.10:111919973::C 267/118914) Row 200033440 (NC_000005.10:111919973::CC 0/118982) Row 200033442 (NC_000005.10:111919973:C: 10910/118054)...	-	Apr 26, 2021 (155)
76	gnomAD - Genomes Submission ignored due to conflicting rows: Row 200033439 (NC_000005.10:111919973::C 267/118914) Row 200033440 (NC_000005.10:111919973::CC 0/118982) Row 200033442 (NC_000005.10:111919973:C: 10910/118054)...	-	Apr 26, 2021 (155)
77	Korean Genome Project Submission ignored due to conflicting rows: Row 13761397 (NC_000005.10:111919974:CCC: 310/1800) Row 13761398 (NC_000005.10:111919973:CCCC: 391/1800) Row 13761399 (NC_000005.10:111919976:C: 171/1800)...	-	Apr 26, 2020 (154)
78	Korean Genome Project Submission ignored due to conflicting rows: Row 13761397 (NC_000005.10:111919974:CCC: 310/1800) Row 13761398 (NC_000005.10:111919973:CCCC: 391/1800) Row 13761399 (NC_000005.10:111919976:C: 171/1800)...	-	Apr 26, 2020 (154)
79	Korean Genome Project Submission ignored due to conflicting rows: Row 13761397 (NC_000005.10:111919974:CCC: 310/1800) Row 13761398 (NC_000005.10:111919973:CCCC: 391/1800) Row 13761399 (NC_000005.10:111919976:C: 171/1800)...	-	Apr 26, 2020 (154)
80	Korean Genome Project Submission ignored due to conflicting rows: Row 13761397 (NC_000005.10:111919974:CCC: 310/1800) Row 13761398 (NC_000005.10:111919973:CCCC: 391/1800) Row 13761399 (NC_000005.10:111919976:C: 171/1800)...	-	Apr 26, 2020 (154)
81	Korean Genome Project Submission ignored due to conflicting rows: Row 13761397 (NC_000005.10:111919974:CCC: 310/1800) Row 13761398 (NC_000005.10:111919973:CCCC: 391/1800) Row 13761399 (NC_000005.10:111919976:C: 171/1800)...	-	Apr 26, 2020 (154)
82	Northern Sweden Submission ignored due to conflicting rows: Row 5972099 (NC_000005.9:111255670:CCC: 302/592) Row 5972100 (NC_000005.9:111255670:CC: 28/592) Row 5972101 (NC_000005.9:111255670:C: 11/592)...	-	Jul 13, 2019 (153)
83	Northern Sweden Submission ignored due to conflicting rows: Row 5972099 (NC_000005.9:111255670:CCC: 302/592) Row 5972100 (NC_000005.9:111255670:CC: 28/592) Row 5972101 (NC_000005.9:111255670:C: 11/592)...	-	Jul 13, 2019 (153)
84	Northern Sweden Submission ignored due to conflicting rows: Row 5972099 (NC_000005.9:111255670:CCC: 302/592) Row 5972100 (NC_000005.9:111255670:CC: 28/592) Row 5972101 (NC_000005.9:111255670:C: 11/592)...	-	Jul 13, 2019 (153)
85	Northern Sweden Submission ignored due to conflicting rows: Row 5972099 (NC_000005.9:111255670:CCC: 302/592) Row 5972100 (NC_000005.9:111255670:CC: 28/592) Row 5972101 (NC_000005.9:111255670:C: 11/592)...	-	Jul 13, 2019 (153)
86	Northern Sweden Submission ignored due to conflicting rows: Row 5972099 (NC_000005.9:111255670:CCC: 302/592) Row 5972100 (NC_000005.9:111255670:CC: 28/592) Row 5972101 (NC_000005.9:111255670:C: 11/592)...	-	Jul 13, 2019 (153)
87	8.3KJPN Submission ignored due to conflicting rows: Row 31453029 (NC_000005.9:111255670:CCCC: 3616/16266) Row 31453030 (NC_000005.9:111255670:CCC: 2724/16266) Row 31453031 (NC_000005.9:111255670:C: 2229/16266)...	-	Apr 26, 2021 (155)
88	8.3KJPN Submission ignored due to conflicting rows: Row 31453029 (NC_000005.9:111255670:CCCC: 3616/16266) Row 31453030 (NC_000005.9:111255670:CCC: 2724/16266) Row 31453031 (NC_000005.9:111255670:C: 2229/16266)...	-	Apr 26, 2021 (155)
89	8.3KJPN Submission ignored due to conflicting rows: Row 31453029 (NC_000005.9:111255670:CCCC: 3616/16266) Row 31453030 (NC_000005.9:111255670:CCC: 2724/16266) Row 31453031 (NC_000005.9:111255670:C: 2229/16266)...	-	Apr 26, 2021 (155)
90	8.3KJPN Submission ignored due to conflicting rows: Row 31453029 (NC_000005.9:111255670:CCCC: 3616/16266) Row 31453030 (NC_000005.9:111255670:CCC: 2724/16266) Row 31453031 (NC_000005.9:111255670:C: 2229/16266)...	-	Apr 26, 2021 (155)
91	8.3KJPN Submission ignored due to conflicting rows: Row 31453029 (NC_000005.9:111255670:CCCC: 3616/16266) Row 31453030 (NC_000005.9:111255670:CCC: 2724/16266) Row 31453031 (NC_000005.9:111255670:C: 2229/16266)...	-	Apr 26, 2021 (155)
92	8.3KJPN Submission ignored due to conflicting rows: Row 31453029 (NC_000005.9:111255670:CCCC: 3616/16266) Row 31453030 (NC_000005.9:111255670:CCC: 2724/16266) Row 31453031 (NC_000005.9:111255670:C: 2229/16266)...	-	Apr 26, 2021 (155)
93	14KJPN Submission ignored due to conflicting rows: Row 44211449 (NC_000005.10:111919973:CCC: 4591/27878) Row 44211450 (NC_000005.10:111919973:CCCC: 6113/27878) Row 44211451 (NC_000005.10:111919973:C: 3770/27878)...	-	Oct 13, 2022 (156)
94	14KJPN Submission ignored due to conflicting rows: Row 44211449 (NC_000005.10:111919973:CCC: 4591/27878) Row 44211450 (NC_000005.10:111919973:CCCC: 6113/27878) Row 44211451 (NC_000005.10:111919973:C: 3770/27878)...	-	Oct 13, 2022 (156)
95	14KJPN Submission ignored due to conflicting rows: Row 44211449 (NC_000005.10:111919973:CCC: 4591/27878) Row 44211450 (NC_000005.10:111919973:CCCC: 6113/27878) Row 44211451 (NC_000005.10:111919973:C: 3770/27878)...	-	Oct 13, 2022 (156)
96	14KJPN Submission ignored due to conflicting rows: Row 44211449 (NC_000005.10:111919973:CCC: 4591/27878) Row 44211450 (NC_000005.10:111919973:CCCC: 6113/27878) Row 44211451 (NC_000005.10:111919973:C: 3770/27878)...	-	Oct 13, 2022 (156)
97	14KJPN Submission ignored due to conflicting rows: Row 44211449 (NC_000005.10:111919973:CCC: 4591/27878) Row 44211450 (NC_000005.10:111919973:CCCC: 6113/27878) Row 44211451 (NC_000005.10:111919973:C: 3770/27878)...	-	Oct 13, 2022 (156)
98	14KJPN Submission ignored due to conflicting rows: Row 44211449 (NC_000005.10:111919973:CCC: 4591/27878) Row 44211450 (NC_000005.10:111919973:CCCC: 6113/27878) Row 44211451 (NC_000005.10:111919973:C: 3770/27878)...	-	Oct 13, 2022 (156)
99	ALFA	NC_000005.10 - 111919974	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs368573043	May 15, 2013 (138)
rs375104724	May 13, 2013 (138)
rs796700004	Nov 08, 2017 (151)
rs796475558	Nov 08, 2017 (151)
rs59070232	Apr 25, 2013 (138)
rs112474161	Oct 11, 2011 (135)
rs199957637	May 11, 2012 (137)
rs371734816	May 15, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5835440552	NC_000005.9:111255670:CCCCCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCC
ss3715415551, ss4126756137	NC_000005.10:111919973:CCCCCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCC	(self)
ss4126756136	NC_000005.10:111919973:CCCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCC	(self)
14150951915	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCC	(self)
ss288651627	NC_000005.8:111283569:CCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCC	(self)
ss1804015179, ss2997554150, ss3732687237, ss5173483722, ss5835440551	NC_000005.9:111255670:CCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCC	(self)
ss554210389	NC_000005.9:111255678:CCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCC	(self)
ss3957383397, ss4126756135, ss5265320370, ss5463342885, ss5710374346	NC_000005.10:111919973:CCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCC	(self)
14150951915	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCC	(self)
ss3715415550	NC_000005.10:111919976:CCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCC	(self)
ss193817341	NT_034772.6:19569542:CCCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCC	(self)
ss288651626	NC_000005.8:111283569:CCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss80919474, ss80923775	NC_000005.8:111283578:CCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
28275725, ss666323826, ss1374307626, ss1536475296, ss3644192776, ss3732687234, ss5173483723, ss5835440550	NC_000005.9:111255670:CCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss554210387	NC_000005.9:111255678:CCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss3065046065, ss3645899703, ss3648139680, ss3807053358, ss4126756134, ss5265320369, ss5463342882, ss5710374345	NC_000005.10:111919973:CCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
14150951915	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss3957383396	NC_000005.10:111919974:CCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss3715415549	NC_000005.10:111919977:CCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss287778894	NT_034772.6:19569542:CCC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCC	(self)
ss3732687235, ss5173483725	NC_000005.9:111255670:CC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCC	(self)
ss4126756133, ss5265320372, ss5463342884, ss5710374348	NC_000005.10:111919973:CC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCC	(self)
14150951915	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCC	(self)
ss3957383399	NC_000005.10:111919975:CC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCC	(self)
ss3715415548	NC_000005.10:111919978:CC:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCC	(self)
ss1804015178, ss3732687236, ss5173483724	NC_000005.9:111255670:C:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss554210392	NC_000005.9:111255680:C:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss3645899702, ss5463342883, ss5710374347	NC_000005.10:111919973:C:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
14150951915	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss3957383398	NC_000005.10:111919976:C:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss3715415547	NC_000005.10:111919979:C:	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCC	(self)
ss3732687238, ss5173483726	NC_000005.9:111255670::C	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss4126756131, ss5265320371, ss5710374349	NC_000005.10:111919973::C	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
14150951915	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss3957383400	NC_000005.10:111919977::C	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss5173483727	NC_000005.9:111255670::CC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCCC	(self)
ss4126756132, ss5265320373, ss5710374350	NC_000005.10:111919973::CC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCCC	(self)
14150951915	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCCC	NC_000005.10:111919973:CCCCCCCCCCC… NC_000005.10:111919973:CCCCCCCCCCCC:CCCCCCCCCCCCCC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34120230

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs34120230