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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34213399

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr19:47864871-47864890 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
del(T)12 / del(T)10 / del(T)9 / de…

del(T)12 / del(T)10 / del(T)9 / del(T)8 / del(T)7 / del(T)6 / del(T)5 / del(T)4 / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)4 / dup(T)5 / dup(T)6 / dup(T)7 / dup(T)8 / dup(T)9 / dup(T)10

Variation Type
Indel Insertion and Deletion
Frequency
del(T)12=0.000004 (1/264690, TOPMED)
(T)20=0.4236 (2058/4858, ALFA)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
LINC01595 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 4858 TTTTTTTTTTTTTTTTTTTT=0.4236 TTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.5605, TTTTTTTTTTTTTTTTTTTTTT=0.0121, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0006, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0010, TTTTTTTTTTTTTTTTTTTTTTTTT=0.0016, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0004, TTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0000 0.370934 0.505703 0.123363 32
European Sub 4784 TTTTTTTTTTTTTTTTTTTT=0.4151 TTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.5688, TTTTTTTTTTTTTTTTTTTTTT=0.0123, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0006, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0010, TTTTTTTTTTTTTTTTTTTTTTTTT=0.0017, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0004, TTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0000 0.361373 0.513305 0.125322 32
African Sub 46 TTTTTTTTTTTTTTTTTTTT=1.00 TTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.00 1.0 0.0 0.0 N/A
African Others Sub 0 TTTTTTTTTTTTTTTTTTTT=0 TTTTTTTT=0, TTTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
African American Sub 46 TTTTTTTTTTTTTTTTTTTT=1.00 TTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.00 1.0 0.0 0.0 N/A
Asian Sub 0 TTTTTTTTTTTTTTTTTTTT=0 TTTTTTTT=0, TTTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
East Asian Sub 0 TTTTTTTTTTTTTTTTTTTT=0 TTTTTTTT=0, TTTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
Other Asian Sub 0 TTTTTTTTTTTTTTTTTTTT=0 TTTTTTTT=0, TTTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
Latin American 1 Sub 4 TTTTTTTTTTTTTTTTTTTT=1.0 TTTTTTTT=0.0, TTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0 1.0 0.0 0.0 N/A
Latin American 2 Sub 0 TTTTTTTTTTTTTTTTTTTT=0 TTTTTTTT=0, TTTTTTTTTT=0, TTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
South Asian Sub 2 TTTTTTTTTTTTTTTTTTTT=1.0 TTTTTTTT=0.0, TTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.0 1.0 0.0 0.0 N/A
Other Sub 22 TTTTTTTTTTTTTTTTTTTT=0.91 TTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.09, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTT=0.00 0.909091 0.090909 0.0 7


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 (T)20=0.999996 del(T)12=0.000004
Allele Frequency Aggregator Total Global 4858 (T)20=0.4236 del(T)12=0.0000, del(T)10=0.0000, del(T)8=0.0000, del(T)6=0.0000, del(T)5=0.0000, del(T)4=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.5605, dupTT=0.0121, dupTTT=0.0000, dup(T)4=0.0000, dup(T)5=0.0016, dup(T)6=0.0000, dup(T)7=0.0004, dup(T)8=0.0006, dup(T)10=0.0010
Allele Frequency Aggregator European Sub 4784 (T)20=0.4151 del(T)12=0.0000, del(T)10=0.0000, del(T)8=0.0000, del(T)6=0.0000, del(T)5=0.0000, del(T)4=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.5688, dupTT=0.0123, dupTTT=0.0000, dup(T)4=0.0000, dup(T)5=0.0017, dup(T)6=0.0000, dup(T)7=0.0004, dup(T)8=0.0006, dup(T)10=0.0010
Allele Frequency Aggregator African Sub 46 (T)20=1.00 del(T)12=0.00, del(T)10=0.00, del(T)8=0.00, del(T)6=0.00, del(T)5=0.00, del(T)4=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)4=0.00, dup(T)5=0.00, dup(T)6=0.00, dup(T)7=0.00, dup(T)8=0.00, dup(T)10=0.00
Allele Frequency Aggregator Other Sub 22 (T)20=0.91 del(T)12=0.00, del(T)10=0.00, del(T)8=0.00, del(T)6=0.00, del(T)5=0.00, del(T)4=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.09, dupTT=0.00, dupTTT=0.00, dup(T)4=0.00, dup(T)5=0.00, dup(T)6=0.00, dup(T)7=0.00, dup(T)8=0.00, dup(T)10=0.00
Allele Frequency Aggregator Latin American 1 Sub 4 (T)20=1.0 del(T)12=0.0, del(T)10=0.0, del(T)8=0.0, del(T)6=0.0, del(T)5=0.0, del(T)4=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)4=0.0, dup(T)5=0.0, dup(T)6=0.0, dup(T)7=0.0, dup(T)8=0.0, dup(T)10=0.0
Allele Frequency Aggregator South Asian Sub 2 (T)20=1.0 del(T)12=0.0, del(T)10=0.0, del(T)8=0.0, del(T)6=0.0, del(T)5=0.0, del(T)4=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)4=0.0, dup(T)5=0.0, dup(T)6=0.0, dup(T)7=0.0, dup(T)8=0.0, dup(T)10=0.0
Allele Frequency Aggregator Latin American 2 Sub 0 (T)20=0 del(T)12=0, del(T)10=0, del(T)8=0, del(T)6=0, del(T)5=0, del(T)4=0, delTTT=0, delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)4=0, dup(T)5=0, dup(T)6=0, dup(T)7=0, dup(T)8=0, dup(T)10=0
Allele Frequency Aggregator Asian Sub 0 (T)20=0 del(T)12=0, del(T)10=0, del(T)8=0, del(T)6=0, del(T)5=0, del(T)4=0, delTTT=0, delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)4=0, dup(T)5=0, dup(T)6=0, dup(T)7=0, dup(T)8=0, dup(T)10=0
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 19 NC_000019.10:g.47864879_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864881_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864882_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864883_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864884_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864885_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864886_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864887_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864888_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864889_47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864890del
GRCh38.p14 chr 19 NC_000019.10:g.47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864889_47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864888_47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864887_47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864886_47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864885_47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864884_47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864883_47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864882_47864890dup
GRCh38.p14 chr 19 NC_000019.10:g.47864881_47864890dup
GRCh37.p13 chr 19 NC_000019.9:g.48368136_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368138_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368139_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368140_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368141_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368142_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368143_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368144_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368145_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368146_48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368147del
GRCh37.p13 chr 19 NC_000019.9:g.48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368146_48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368145_48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368144_48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368143_48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368142_48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368141_48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368140_48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368139_48368147dup
GRCh37.p13 chr 19 NC_000019.9:g.48368138_48368147dup
Gene: LINC01595, uncharacterized LINC01595 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
LINC01595 transcript variant X1 XR_936005.3:n. N/A Intron Variant
LINC01595 transcript variant X2 XR_936006.3:n. N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (T)20= del(T)12 del(T)10 del(T)9 del(T)8 del(T)7 del(T)6 del(T)5 del(T)4 delTTT delTT delT dupT dupTT dupTTT dup(T)4 dup(T)5 dup(T)6 dup(T)7 dup(T)8 dup(T)9 dup(T)10
GRCh38.p14 chr 19 NC_000019.10:g.47864871_47864890= NC_000019.10:g.47864879_47864890del NC_000019.10:g.47864881_47864890del NC_000019.10:g.47864882_47864890del NC_000019.10:g.47864883_47864890del NC_000019.10:g.47864884_47864890del NC_000019.10:g.47864885_47864890del NC_000019.10:g.47864886_47864890del NC_000019.10:g.47864887_47864890del NC_000019.10:g.47864888_47864890del NC_000019.10:g.47864889_47864890del NC_000019.10:g.47864890del NC_000019.10:g.47864890dup NC_000019.10:g.47864889_47864890dup NC_000019.10:g.47864888_47864890dup NC_000019.10:g.47864887_47864890dup NC_000019.10:g.47864886_47864890dup NC_000019.10:g.47864885_47864890dup NC_000019.10:g.47864884_47864890dup NC_000019.10:g.47864883_47864890dup NC_000019.10:g.47864882_47864890dup NC_000019.10:g.47864881_47864890dup
GRCh37.p13 chr 19 NC_000019.9:g.48368128_48368147= NC_000019.9:g.48368136_48368147del NC_000019.9:g.48368138_48368147del NC_000019.9:g.48368139_48368147del NC_000019.9:g.48368140_48368147del NC_000019.9:g.48368141_48368147del NC_000019.9:g.48368142_48368147del NC_000019.9:g.48368143_48368147del NC_000019.9:g.48368144_48368147del NC_000019.9:g.48368145_48368147del NC_000019.9:g.48368146_48368147del NC_000019.9:g.48368147del NC_000019.9:g.48368147dup NC_000019.9:g.48368146_48368147dup NC_000019.9:g.48368145_48368147dup NC_000019.9:g.48368144_48368147dup NC_000019.9:g.48368143_48368147dup NC_000019.9:g.48368142_48368147dup NC_000019.9:g.48368141_48368147dup NC_000019.9:g.48368140_48368147dup NC_000019.9:g.48368139_48368147dup NC_000019.9:g.48368138_48368147dup
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

48 SubSNP, 30 Frequency submissions
No Submitter Submission ID Date (Build)
1 ABI ss40976956 Mar 13, 2006 (126)
2 HUMANGENOME_JCVI ss95730591 Feb 13, 2009 (130)
3 PJP ss294965444 May 09, 2011 (137)
4 PJP ss294965445 May 09, 2011 (135)
5 SWEGEN ss3017580327 Nov 08, 2017 (151)
6 SWEGEN ss3017580328 Nov 08, 2017 (151)
7 EVA_DECODE ss3702892829 Jul 13, 2019 (153)
8 EVA_DECODE ss3702892830 Jul 13, 2019 (153)
9 EVA_DECODE ss3702892831 Jul 13, 2019 (153)
10 EVA_DECODE ss3702892832 Jul 13, 2019 (153)
11 EVA ss3835492946 Apr 27, 2020 (154)
12 GNOMAD ss4332341268 Apr 26, 2021 (155)
13 GNOMAD ss4332341269 Apr 26, 2021 (155)
14 GNOMAD ss4332341270 Apr 26, 2021 (155)
15 GNOMAD ss4332341271 Apr 26, 2021 (155)
16 GNOMAD ss4332341272 Apr 26, 2021 (155)
17 GNOMAD ss4332341273 Apr 26, 2021 (155)
18 GNOMAD ss4332341274 Apr 26, 2021 (155)
19 GNOMAD ss4332341275 Apr 26, 2021 (155)
20 GNOMAD ss4332341276 Apr 26, 2021 (155)
21 GNOMAD ss4332341277 Apr 26, 2021 (155)
22 GNOMAD ss4332341279 Apr 26, 2021 (155)
23 GNOMAD ss4332341280 Apr 26, 2021 (155)
24 GNOMAD ss4332341281 Apr 26, 2021 (155)
25 GNOMAD ss4332341282 Apr 26, 2021 (155)
26 GNOMAD ss4332341283 Apr 26, 2021 (155)
27 GNOMAD ss4332341284 Apr 26, 2021 (155)
28 GNOMAD ss4332341285 Apr 26, 2021 (155)
29 GNOMAD ss4332341286 Apr 26, 2021 (155)
30 GNOMAD ss4332341287 Apr 26, 2021 (155)
31 TOPMED ss5076934552 Apr 26, 2021 (155)
32 TOMMO_GENOMICS ss5228063229 Apr 26, 2021 (155)
33 TOMMO_GENOMICS ss5228063230 Apr 26, 2021 (155)
34 TOMMO_GENOMICS ss5228063231 Apr 26, 2021 (155)
35 TOMMO_GENOMICS ss5228063232 Apr 26, 2021 (155)
36 1000G_HIGH_COVERAGE ss5307481861 Oct 13, 2022 (156)
37 1000G_HIGH_COVERAGE ss5307481862 Oct 13, 2022 (156)
38 HUGCELL_USP ss5499965348 Oct 13, 2022 (156)
39 HUGCELL_USP ss5499965349 Oct 13, 2022 (156)
40 HUGCELL_USP ss5499965350 Oct 13, 2022 (156)
41 TOMMO_GENOMICS ss5786798395 Oct 13, 2022 (156)
42 TOMMO_GENOMICS ss5786798396 Oct 13, 2022 (156)
43 TOMMO_GENOMICS ss5786798398 Oct 13, 2022 (156)
44 TOMMO_GENOMICS ss5786798399 Oct 13, 2022 (156)
45 TOMMO_GENOMICS ss5786798400 Oct 13, 2022 (156)
46 EVA ss5840638499 Oct 13, 2022 (156)
47 EVA ss5840638500 Oct 13, 2022 (156)
48 EVA ss5840638501 Oct 13, 2022 (156)
49 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
50 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
51 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
52 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
53 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
54 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
55 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
56 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
57 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
58 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
59 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
60 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
61 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
62 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
63 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
64 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
65 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
66 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
67 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 541865826 (NC_000019.10:47864870::T 62658/80630)
Row 541865827 (NC_000019.10:47864870::TT 1575/80396)
Row 541865828 (NC_000019.10:47864870::TTT 33/80650)...

- Apr 26, 2021 (155)
68 8.3KJPN

Submission ignored due to conflicting rows:
Row 86032536 (NC_000019.9:48368127::T 13184/15840)
Row 86032537 (NC_000019.9:48368127::TTTTT 120/15840)
Row 86032538 (NC_000019.9:48368127::TT 49/15840)...

- Apr 26, 2021 (155)
69 8.3KJPN

Submission ignored due to conflicting rows:
Row 86032536 (NC_000019.9:48368127::T 13184/15840)
Row 86032537 (NC_000019.9:48368127::TTTTT 120/15840)
Row 86032538 (NC_000019.9:48368127::TT 49/15840)...

- Apr 26, 2021 (155)
70 8.3KJPN

Submission ignored due to conflicting rows:
Row 86032536 (NC_000019.9:48368127::T 13184/15840)
Row 86032537 (NC_000019.9:48368127::TTTTT 120/15840)
Row 86032538 (NC_000019.9:48368127::TT 49/15840)...

- Apr 26, 2021 (155)
71 8.3KJPN

Submission ignored due to conflicting rows:
Row 86032536 (NC_000019.9:48368127::T 13184/15840)
Row 86032537 (NC_000019.9:48368127::TTTTT 120/15840)
Row 86032538 (NC_000019.9:48368127::TT 49/15840)...

- Apr 26, 2021 (155)
72 14KJPN

Submission ignored due to conflicting rows:
Row 120635499 (NC_000019.10:47864870::T 20532/25434)
Row 120635500 (NC_000019.10:47864870::TTTTT 170/25434)
Row 120635502 (NC_000019.10:47864870::TT 70/25434)...

- Oct 13, 2022 (156)
73 14KJPN

Submission ignored due to conflicting rows:
Row 120635499 (NC_000019.10:47864870::T 20532/25434)
Row 120635500 (NC_000019.10:47864870::TTTTT 170/25434)
Row 120635502 (NC_000019.10:47864870::TT 70/25434)...

- Oct 13, 2022 (156)
74 14KJPN

Submission ignored due to conflicting rows:
Row 120635499 (NC_000019.10:47864870::T 20532/25434)
Row 120635500 (NC_000019.10:47864870::TTTTT 170/25434)
Row 120635502 (NC_000019.10:47864870::TT 70/25434)...

- Oct 13, 2022 (156)
75 14KJPN

Submission ignored due to conflicting rows:
Row 120635499 (NC_000019.10:47864870::T 20532/25434)
Row 120635500 (NC_000019.10:47864870::TTTTT 170/25434)
Row 120635502 (NC_000019.10:47864870::TT 70/25434)...

- Oct 13, 2022 (156)
76 14KJPN

Submission ignored due to conflicting rows:
Row 120635499 (NC_000019.10:47864870::T 20532/25434)
Row 120635500 (NC_000019.10:47864870::TTTTT 170/25434)
Row 120635502 (NC_000019.10:47864870::TT 70/25434)...

- Oct 13, 2022 (156)
77 TopMed NC_000019.10 - 47864871 Apr 26, 2021 (155)
78 ALFA NC_000019.10 - 47864871 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs72044060 May 11, 2012 (137)
rs145356327 Sep 17, 2011 (135)
rs147655821 Sep 17, 2011 (135)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
292480216, ss5076934552 NC_000019.10:47864870:TTTTTTTTTTTT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT

(self)
ss4332341287 NC_000019.10:47864870:TTTTTTTTTT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT

(self)
ss4332341286 NC_000019.10:47864870:TTTTTTTTT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT

(self)
ss4332341285 NC_000019.10:47864870:TTTTTTT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT

(self)
ss4332341284 NC_000019.10:47864870:TTTTTT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT

(self)
ss4332341283 NC_000019.10:47864870:TTTTT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT

(self)
ss4332341282 NC_000019.10:47864870:TTTT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
ss4332341281 NC_000019.10:47864870:TTT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
ss3702892829, ss4332341280 NC_000019.10:47864870:TT: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT

(self)
ss4332341279, ss5307481862, ss5499965348, ss5786798400 NC_000019.10:47864870:T: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT

(self)
ss3702892830 NC_000019.10:47864871:T: NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT

(self)
ss294965444 NC_000019.8:53059940::T NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

(self)
ss294965445 NC_000019.8:53059959::T NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

(self)
ss3017580327, ss3835492946, ss5228063229, ss5840638499 NC_000019.9:48368127::T NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341268, ss5307481861, ss5499965349, ss5786798395 NC_000019.10:47864870::T NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

(self)
ss3702892831 NC_000019.10:47864872::T NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

(self)
ss40976956 NT_011109.16:20636345::T NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

(self)
ss95730591 NT_011109.16:20636365::T NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT

(self)
ss3017580328, ss5228063231, ss5840638500 NC_000019.9:48368127::TT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341269, ss5499965350, ss5786798398 NC_000019.10:47864870::TT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT

(self)
ss3702892832 NC_000019.10:47864872::TT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT

(self)
ss5840638501 NC_000019.9:48368127::TTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT

ss4332341270 NC_000019.10:47864870::TTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT

(self)
ss5228063232 NC_000019.9:48368127::TTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341271, ss5786798399 NC_000019.10:47864870::TTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT

(self)
ss5228063230 NC_000019.9:48368127::TTTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341272, ss5786798396 NC_000019.10:47864870::TTTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341273 NC_000019.10:47864870::TTTTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341274 NC_000019.10:47864870::TTTTTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341275 NC_000019.10:47864870::TTTTTTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341276 NC_000019.10:47864870::TTTTTTTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
ss4332341277 NC_000019.10:47864870::TTTTTTTTTT NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
9537876989 NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

NC_000019.10:47864870:TTTTTTTTTTTT…

NC_000019.10:47864870:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34213399

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d