Name: rs34537590
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34537590

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr4:1189990-1190007 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₅ / del(A)₄ / delAAA / delAA…
del(A)₅ / del(A)₄ / delAAA / delAA / delA / dupA / dup(A)₆ / dup(A)₉
Variation Type: Indel Insertion and Deletion
Frequency: (A)₁₈=0.0649 (325/5008, 1000G)
del(A)₄=0.0000 (0/3412, ALFA)
delAAA=0.0000 (0/3412, ALFA) (+ 5 more)
delAA=0.0000 (0/3412, ALFA)
delA=0.0000 (0/3412, ALFA)
dupA=0.0000 (0/3412, ALFA)
delAA=0.282 (116/412, NorthernSweden)
delAA=0.25 (10/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SPON2 : Intron Variant
LOC124900647 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	3412	AAAAAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
European	Sub	2290	AAAAAAAAAAAAAAAAAA=1.0000	AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African	Sub	814	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
African Others	Sub	28	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
African American	Sub	786	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
Asian	Sub	6	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0	1.0	N/A
East Asian	Sub	2	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0	1.0	N/A
Other Asian	Sub	4	AAAAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0	1.0	N/A
Latin American 1	Sub	36	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Latin American 2	Sub	128	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
South Asian	Sub	24	AAAAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other	Sub	114	AAAAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	(A)₁₈=0.0649	delAA=0.9351
1000Genomes	African	Sub	1322	(A)₁₈=0.1853	delAA=0.8147
1000Genomes	East Asian	Sub	1008	(A)₁₈=0.0437	delAA=0.9563
1000Genomes	Europe	Sub	1006	(A)₁₈=0.0050	delAA=0.9950
1000Genomes	South Asian	Sub	978	(A)₁₈=0.012	delAA=0.988
1000Genomes	American	Sub	694	(A)₁₈=0.027	delAA=0.973
Allele Frequency Aggregator	Total	Global	3412	(A)₁₈=1.0000	del(A)₄=0.0000, delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000
Allele Frequency Aggregator	European	Sub	2290	(A)₁₈=1.0000	del(A)₄=0.0000, delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000
Allele Frequency Aggregator	African	Sub	814	(A)₁₈=1.000	del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000
Allele Frequency Aggregator	Latin American 2	Sub	128	(A)₁₈=1.000	del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000
Allele Frequency Aggregator	Other	Sub	114	(A)₁₈=1.000	del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000
Allele Frequency Aggregator	Latin American 1	Sub	36	(A)₁₈=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00
Allele Frequency Aggregator	South Asian	Sub	24	(A)₁₈=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00
Allele Frequency Aggregator	Asian	Sub	6	(A)₁₈=1.0	del(A)₄=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0
Northern Sweden	ACPOP	Study-wide	412	(A)₁₈=0.718	delAA=0.282
The Danish reference pan genome	Danish	Study-wide	40	(A)₁₈=0.75	delAA=0.25

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 4	NC_000004.12:g.1190003_1190007del
GRCh38.p14 chr 4	NC_000004.12:g.1190004_1190007del
GRCh38.p14 chr 4	NC_000004.12:g.1190005_1190007del
GRCh38.p14 chr 4	NC_000004.12:g.1190006_1190007del
GRCh38.p14 chr 4	NC_000004.12:g.1190007del
GRCh38.p14 chr 4	NC_000004.12:g.1190007dup
GRCh38.p14 chr 4	NC_000004.12:g.1190002_1190007dup
GRCh38.p14 chr 4	NC_000004.12:g.1189999_1190007dup
GRCh37.p13 chr 4	NC_000004.11:g.1183791_1183795del
GRCh37.p13 chr 4	NC_000004.11:g.1183792_1183795del
GRCh37.p13 chr 4	NC_000004.11:g.1183793_1183795del
GRCh37.p13 chr 4	NC_000004.11:g.1183794_1183795del
GRCh37.p13 chr 4	NC_000004.11:g.1183795del
GRCh37.p13 chr 4	NC_000004.11:g.1183795dup
GRCh37.p13 chr 4	NC_000004.11:g.1183790_1183795dup
GRCh37.p13 chr 4	NC_000004.11:g.1183787_1183795dup

Gene: SPON2, spondin 2 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SPON2 transcript variant 3	NM_001199021.2:c.-238-104… NM_001199021.2:c.-238-10453_-238-10449del	N/A	Intron Variant
SPON2 transcript variant 2	NM_001128325.3:c.	N/A	Genic Upstream Transcript Variant
SPON2 transcript variant 1	NM_012445.4:c.	N/A	Genic Upstream Transcript Variant

Gene: LOC124900647, uncharacterized LOC124900647 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC124900647 transcript variant X1	XM_047416477.1:c.-2486-10… XM_047416477.1:c.-2486-1097_-2486-1093del	N/A	Intron Variant
LOC124900647 transcript variant X2	XM_047416478.1:c.-3596_-3… XM_047416478.1:c.-3596_-3579=	N/A	5 Prime UTR Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₈=	del(A)₅	del(A)₄	delAAA	delAA	delA	dupA	dup(A)₆	dup(A)₉
GRCh38.p14 chr 4	NC_000004.12:g.1189990_1190007=	NC_000004.12:g.1190003_1190007del	NC_000004.12:g.1190004_1190007del	NC_000004.12:g.1190005_1190007del	NC_000004.12:g.1190006_1190007del	NC_000004.12:g.1190007del	NC_000004.12:g.1190007dup	NC_000004.12:g.1190002_1190007dup	NC_000004.12:g.1189999_1190007dup
GRCh37.p13 chr 4	NC_000004.11:g.1183778_1183795=	NC_000004.11:g.1183791_1183795del	NC_000004.11:g.1183792_1183795del	NC_000004.11:g.1183793_1183795del	NC_000004.11:g.1183794_1183795del	NC_000004.11:g.1183795del	NC_000004.11:g.1183795dup	NC_000004.11:g.1183790_1183795dup	NC_000004.11:g.1183787_1183795dup
LOC124900647 transcript variant X2	XM_047416478.1:c.-3596_-3579=	XM_047416478.1:c.-3583_-3579del	XM_047416478.1:c.-3582_-3579del	XM_047416478.1:c.-3581_-3579del	XM_047416478.1:c.-3580_-3579del	XM_047416478.1:c.-3579del	XM_047416478.1:c.-3579dup	XM_047416478.1:c.-3584_-3579dup	XM_047416478.1:c.-3587_-3579dup
SPON2 transcript variant 3	NM_001199021.1:c.-238-10449=	NM_001199021.1:c.-238-10453_-238-10449del	NM_001199021.1:c.-238-10452_-238-10449del	NM_001199021.1:c.-238-10451_-238-10449del	NM_001199021.1:c.-238-10450_-238-10449del	NM_001199021.1:c.-238-10449del	NM_001199021.1:c.-238-10449dup	NM_001199021.1:c.-238-10454_-238-10449dup	NM_001199021.1:c.-238-10457_-238-10449dup
SPON2 transcript variant 3	NM_001199021.2:c.-238-10449=	NM_001199021.2:c.-238-10453_-238-10449del	NM_001199021.2:c.-238-10452_-238-10449del	NM_001199021.2:c.-238-10451_-238-10449del	NM_001199021.2:c.-238-10450_-238-10449del	NM_001199021.2:c.-238-10449del	NM_001199021.2:c.-238-10449dup	NM_001199021.2:c.-238-10454_-238-10449dup	NM_001199021.2:c.-238-10457_-238-10449dup
LOC124900647 transcript variant X1	XM_047416477.1:c.-2486-1110=	XM_047416477.1:c.-2486-1097_-2486-1093del	XM_047416477.1:c.-2486-1096_-2486-1093del	XM_047416477.1:c.-2486-1095_-2486-1093del	XM_047416477.1:c.-2486-1094_-2486-1093del	XM_047416477.1:c.-2486-1093del	XM_047416477.1:c.-2486-1093dup	XM_047416477.1:c.-2486-1098_-2486-1093dup	XM_047416477.1:c.-2486-1101_-2486-1093dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

44 SubSNP, 16 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42221926	Mar 14, 2006 (126)
2	HGSV	ss79977102	Sep 08, 2015 (146)
3	HGSV	ss80944749	Sep 08, 2015 (146)
4	HGSV	ss80959520	Sep 08, 2015 (146)
5	HGSV	ss80989506	Sep 08, 2015 (146)
6	HUMANGENOME_JCVI	ss95344093	Feb 05, 2009 (130)
7	BCMHGSC_JDW	ss103683301	Dec 01, 2009 (131)
8	GMI	ss288474836	May 04, 2012 (137)
9	PJP	ss295149421	May 09, 2011 (137)
10	PJP	ss295149422	May 09, 2011 (135)
11	BILGI_BIOE	ss666243064	Apr 25, 2013 (138)
12	1000GENOMES	ss1371622539	Aug 21, 2014 (142)
13	EVA_GENOME_DK	ss1576146940	Apr 01, 2015 (144)
14	SYSTEMSBIOZJU	ss2625512734	Nov 08, 2017 (151)
15	MCHAISSO	ss3064085443	Nov 08, 2017 (151)
16	MCHAISSO	ss3064950019	Nov 08, 2017 (151)
17	MCHAISSO	ss3065929042	Nov 08, 2017 (151)
18	EVA_DECODE	ss3711228337	Jul 13, 2019 (153)
19	EVA_DECODE	ss3711228338	Jul 13, 2019 (153)
20	EVA_DECODE	ss3711228339	Jul 13, 2019 (153)
21	EVA_DECODE	ss3711228340	Jul 13, 2019 (153)
22	EVA_DECODE	ss3711228341	Jul 13, 2019 (153)
23	ACPOP	ss3730774719	Jul 13, 2019 (153)
24	KHV_HUMAN_GENOMES	ss3804419644	Jul 13, 2019 (153)
25	EVA	ss3828324035	Apr 25, 2020 (154)
26	GNOMAD	ss4089194341	Apr 26, 2021 (155)
27	GNOMAD	ss4089194342	Apr 26, 2021 (155)
28	GNOMAD	ss4089194344	Apr 26, 2021 (155)
29	GNOMAD	ss4089194345	Apr 26, 2021 (155)
30	GNOMAD	ss4089194346	Apr 26, 2021 (155)
31	TOMMO_GENOMICS	ss5163798315	Apr 26, 2021 (155)
32	TOMMO_GENOMICS	ss5163798316	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5163798317	Apr 26, 2021 (155)
34	1000G_HIGH_COVERAGE	ss5257727620	Oct 13, 2022 (156)
35	1000G_HIGH_COVERAGE	ss5257727621	Oct 13, 2022 (156)
36	HUGCELL_USP	ss5456683951	Oct 13, 2022 (156)
37	HUGCELL_USP	ss5456683952	Oct 13, 2022 (156)
38	HUGCELL_USP	ss5456683953	Oct 13, 2022 (156)
39	TOMMO_GENOMICS	ss5697326706	Oct 13, 2022 (156)
40	TOMMO_GENOMICS	ss5697326707	Oct 13, 2022 (156)
41	TOMMO_GENOMICS	ss5697326709	Oct 13, 2022 (156)
42	YY_MCH	ss5804673871	Oct 13, 2022 (156)
43	EVA	ss5843422861	Oct 13, 2022 (156)
44	EVA	ss5843422862	Oct 13, 2022 (156)
45	1000Genomes	NC_000004.11 - 1183778	Oct 12, 2018 (152)
46	The Danish reference pan genome	NC_000004.11 - 1183778	Apr 25, 2020 (154)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 137793704 (NC_000004.12:1189989::A 9/85642) Row 137793705 (NC_000004.12:1189989::AAAAAAAAA 1/85648) Row 137793707 (NC_000004.12:1189989:A: 210/85568)...	-	Apr 26, 2021 (155)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 137793704 (NC_000004.12:1189989::A 9/85642) Row 137793705 (NC_000004.12:1189989::AAAAAAAAA 1/85648) Row 137793707 (NC_000004.12:1189989:A: 210/85568)...	-	Apr 26, 2021 (155)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 137793704 (NC_000004.12:1189989::A 9/85642) Row 137793705 (NC_000004.12:1189989::AAAAAAAAA 1/85648) Row 137793707 (NC_000004.12:1189989:A: 210/85568)...	-	Apr 26, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 137793704 (NC_000004.12:1189989::A 9/85642) Row 137793705 (NC_000004.12:1189989::AAAAAAAAA 1/85648) Row 137793707 (NC_000004.12:1189989:A: 210/85568)...	-	Apr 26, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 137793704 (NC_000004.12:1189989::A 9/85642) Row 137793705 (NC_000004.12:1189989::AAAAAAAAA 1/85648) Row 137793707 (NC_000004.12:1189989:A: 210/85568)...	-	Apr 26, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 137793704 (NC_000004.12:1189989::A 9/85642) Row 137793705 (NC_000004.12:1189989::AAAAAAAAA 1/85648) Row 137793707 (NC_000004.12:1189989:A: 210/85568)...	-	Apr 26, 2021 (155)
53	Northern Sweden	NC_000004.11 - 1183778	Jul 13, 2019 (153)
54	8.3KJPN Submission ignored due to conflicting rows: Row 21767622 (NC_000004.11:1183777:AA: 12439/16726) Row 21767623 (NC_000004.11:1183777:A: 30/16726) Row 21767624 (NC_000004.11:1183777:AAA: 17/16726)	-	Apr 26, 2021 (155)
55	8.3KJPN Submission ignored due to conflicting rows: Row 21767622 (NC_000004.11:1183777:AA: 12439/16726) Row 21767623 (NC_000004.11:1183777:A: 30/16726) Row 21767624 (NC_000004.11:1183777:AAA: 17/16726)	-	Apr 26, 2021 (155)
56	8.3KJPN Submission ignored due to conflicting rows: Row 21767622 (NC_000004.11:1183777:AA: 12439/16726) Row 21767623 (NC_000004.11:1183777:A: 30/16726) Row 21767624 (NC_000004.11:1183777:AAA: 17/16726)	-	Apr 26, 2021 (155)
57	14KJPN Submission ignored due to conflicting rows: Row 31163810 (NC_000004.12:1189989:AA: 21154/28226) Row 31163811 (NC_000004.12:1189989:AAA: 31/28226) Row 31163813 (NC_000004.12:1189989:A: 62/28226)	-	Oct 13, 2022 (156)
58	14KJPN Submission ignored due to conflicting rows: Row 31163810 (NC_000004.12:1189989:AA: 21154/28226) Row 31163811 (NC_000004.12:1189989:AAA: 31/28226) Row 31163813 (NC_000004.12:1189989:A: 62/28226)	-	Oct 13, 2022 (156)
59	14KJPN Submission ignored due to conflicting rows: Row 31163810 (NC_000004.12:1189989:AA: 21154/28226) Row 31163811 (NC_000004.12:1189989:AAA: 31/28226) Row 31163813 (NC_000004.12:1189989:A: 62/28226)	-	Oct 13, 2022 (156)
60	ALFA	NC_000004.12 - 1189990	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs59563799	May 25, 2008 (130)
rs137984301	May 11, 2012 (137)
rs149482988	Sep 17, 2011 (135)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4089194346	NC_000004.12:1189989:AAAAA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss103683301	NT_037622.5:1173790:AAAAA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3711228341, ss4089194345	NC_000004.12:1189989:AAAA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
5116779000	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss5163798317, ss5843422862	NC_000004.11:1183777:AAA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss4089194344, ss5257727621, ss5456683953, ss5697326707	NC_000004.12:1189989:AAA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
5116779000	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3711228340	NC_000004.12:1189990:AAA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss79977102, ss80944749, ss80959520, ss80989506	NC_000004.9:1173623:AA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss288474836, ss295149421	NC_000004.10:1173777:AA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss295149422	NC_000004.10:1173793:AA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
19409809, 886696, 4059584, ss666243064, ss1371622539, ss1576146940, ss2625512734, ss3730774719, ss3828324035, ss5163798315, ss5843422861	NC_000004.11:1183777:AA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3064085443, ss3064950019, ss3065929042, ss3804419644, ss5257727620, ss5456683951, ss5697326706, ss5804673871	NC_000004.12:1189989:AA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
5116779000	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss3711228339	NC_000004.12:1189991:AA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss42221926	NT_037622.5:1173793:AA:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss5163798316	NC_000004.11:1183777:A:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss5456683952, ss5697326709	NC_000004.12:1189989:A:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
5116779000	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3711228338	NC_000004.12:1189992:A:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss95344093	NT_037622.5:1173794:A:	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss4089194341	NC_000004.12:1189989::A	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
5116779000	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss95344093	NT_037622.5:1173794:A:AA	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss3711228337	NC_000004.12:1189993::AAAAAA	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4089194342	NC_000004.12:1189989::AAAAAAAAA	NC_000004.12:1189989:AAAAAAAAAAAAA… NC_000004.12:1189989:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34537590

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs34537590