Name: rs34583108
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34583108

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr15:31144713-31144732 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₉ / del(T)₈ / del(T)₇ / delT…
del(T)₉ / del(T)₈ / del(T)₇ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄
Variation Type: Indel Insertion and Deletion
Frequency: del(T)₉=0.00000 (0/12294, ALFA)
del(T)₈=0.00000 (0/12294, ALFA)
del(T)₇=0.00000 (0/12294, ALFA) (+ 7 more)
delTT=0.00000 (0/12294, ALFA)
delT=0.00000 (0/12294, ALFA)
dupT=0.00000 (0/12294, ALFA)
dupTT=0.00000 (0/12294, ALFA)
dupTTT=0.00000 (0/12294, ALFA)
dup(T)₄=0.00000 (0/12294, ALFA)
delT=0.054 (32/590, NorthernSweden)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TRPM1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	12294	TTTTTTTTTTTTTTTTTTTT=1.00000	TTTTTTTTTTT=0.00000, TTTTTTTTTTTT=0.00000, TTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTTTTTT=0.00000	1.0	N/A
European	Sub	8764	TTTTTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	N/A
African	Sub	2238	TTTTTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	N/A
African Others	Sub	90	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
African American	Sub	2148	TTTTTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	N/A
Asian	Sub	102	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	N/A
East Asian	Sub	80	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
Other Asian	Sub	22	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
Latin American 1	Sub	122	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	N/A
Latin American 2	Sub	546	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	N/A
South Asian	Sub	92	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
Other	Sub	430	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	12294	(T)₂₀=1.00000	del(T)₉=0.00000, del(T)₈=0.00000, del(T)₇=0.00000, delTT=0.00000, delT=0.00000, dupT=0.00000, dupTT=0.00000, dupTTT=0.00000, dup(T)₄=0.00000
Allele Frequency Aggregator	European	Sub	8764	(T)₂₀=1.0000	del(T)₉=0.0000, del(T)₈=0.0000, del(T)₇=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000, dup(T)₄=0.0000
Allele Frequency Aggregator	African	Sub	2238	(T)₂₀=1.0000	del(T)₉=0.0000, del(T)₈=0.0000, del(T)₇=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000, dup(T)₄=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	546	(T)₂₀=1.000	del(T)₉=0.000, del(T)₈=0.000, del(T)₇=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Other	Sub	430	(T)₂₀=1.000	del(T)₉=0.000, del(T)₈=0.000, del(T)₇=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Latin American 1	Sub	122	(T)₂₀=1.000	del(T)₉=0.000, del(T)₈=0.000, del(T)₇=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	Asian	Sub	102	(T)₂₀=1.000	del(T)₉=0.000, del(T)₈=0.000, del(T)₇=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000
Allele Frequency Aggregator	South Asian	Sub	92	(T)₂₀=1.00	del(T)₉=0.00, del(T)₈=0.00, del(T)₇=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00
Northern Sweden	ACPOP	Study-wide	590	(T)₂₀=0.946	delT=0.054

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 15	NC_000015.10:g.31144724_31144732del
GRCh38.p14 chr 15	NC_000015.10:g.31144725_31144732del
GRCh38.p14 chr 15	NC_000015.10:g.31144726_31144732del
GRCh38.p14 chr 15	NC_000015.10:g.31144730_31144732del
GRCh38.p14 chr 15	NC_000015.10:g.31144731_31144732del
GRCh38.p14 chr 15	NC_000015.10:g.31144732del
GRCh38.p14 chr 15	NC_000015.10:g.31144732dup
GRCh38.p14 chr 15	NC_000015.10:g.31144731_31144732dup
GRCh38.p14 chr 15	NC_000015.10:g.31144730_31144732dup
GRCh38.p14 chr 15	NC_000015.10:g.31144729_31144732dup
GRCh37.p13 chr 15	NC_000015.9:g.31436927_31436935del
GRCh37.p13 chr 15	NC_000015.9:g.31436928_31436935del
GRCh37.p13 chr 15	NC_000015.9:g.31436929_31436935del
GRCh37.p13 chr 15	NC_000015.9:g.31436933_31436935del
GRCh37.p13 chr 15	NC_000015.9:g.31436934_31436935del
GRCh37.p13 chr 15	NC_000015.9:g.31436935del
GRCh37.p13 chr 15	NC_000015.9:g.31436935dup
GRCh37.p13 chr 15	NC_000015.9:g.31436934_31436935dup
GRCh37.p13 chr 15	NC_000015.9:g.31436933_31436935dup
GRCh37.p13 chr 15	NC_000015.9:g.31436932_31436935dup
TRPM1 RefSeqGene	NG_016453.2:g.21553_21561del
TRPM1 RefSeqGene	NG_016453.2:g.21554_21561del
TRPM1 RefSeqGene	NG_016453.2:g.21555_21561del
TRPM1 RefSeqGene	NG_016453.2:g.21559_21561del
TRPM1 RefSeqGene	NG_016453.2:g.21560_21561del
TRPM1 RefSeqGene	NG_016453.2:g.21561del
TRPM1 RefSeqGene	NG_016453.2:g.21561dup
TRPM1 RefSeqGene	NG_016453.2:g.21560_21561dup
TRPM1 RefSeqGene	NG_016453.2:g.21559_21561dup
TRPM1 RefSeqGene	NG_016453.2:g.21558_21561dup
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318032_3318040del
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318033_3318040del
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318034_3318040del
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318038_3318040del
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318039_3318040del
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318040del
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318040dup
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318039_3318040dup
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318038_3318040dup
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318037_3318040dup
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430484_3430492del
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430485_3430492del
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430486_3430492del
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430490_3430492del
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430491_3430492del
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430492del
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430492dup
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430491_3430492dup
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430490_3430492dup
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430489_3430492dup

Gene: TRPM1, transient receptor potential cation channel subfamily M member 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TRPM1 transcript variant 1	NM_001252020.2:c.54+16185… NM_001252020.2:c.54+16185_54+16193del	N/A	Intron Variant
TRPM1 transcript variant 3	NM_001252024.2:c.	N/A	Genic Upstream Transcript Variant
TRPM1 transcript variant 4	NM_001252030.2:c.	N/A	Genic Upstream Transcript Variant
TRPM1 transcript variant 2	NM_002420.6:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₂₀=	del(T)₉	del(T)₈	del(T)₇	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄
GRCh38.p14 chr 15	NC_000015.10:g.31144713_31144732=	NC_000015.10:g.31144724_31144732del	NC_000015.10:g.31144725_31144732del	NC_000015.10:g.31144726_31144732del	NC_000015.10:g.31144730_31144732del	NC_000015.10:g.31144731_31144732del	NC_000015.10:g.31144732del	NC_000015.10:g.31144732dup	NC_000015.10:g.31144731_31144732dup	NC_000015.10:g.31144730_31144732dup	NC_000015.10:g.31144729_31144732dup
GRCh37.p13 chr 15	NC_000015.9:g.31436916_31436935=	NC_000015.9:g.31436927_31436935del	NC_000015.9:g.31436928_31436935del	NC_000015.9:g.31436929_31436935del	NC_000015.9:g.31436933_31436935del	NC_000015.9:g.31436934_31436935del	NC_000015.9:g.31436935del	NC_000015.9:g.31436935dup	NC_000015.9:g.31436934_31436935dup	NC_000015.9:g.31436933_31436935dup	NC_000015.9:g.31436932_31436935dup
TRPM1 RefSeqGene	NG_016453.2:g.21542_21561=	NG_016453.2:g.21553_21561del	NG_016453.2:g.21554_21561del	NG_016453.2:g.21555_21561del	NG_016453.2:g.21559_21561del	NG_016453.2:g.21560_21561del	NG_016453.2:g.21561del	NG_016453.2:g.21561dup	NG_016453.2:g.21560_21561dup	NG_016453.2:g.21559_21561dup	NG_016453.2:g.21558_21561dup
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.3318021_3318040=	NW_011332701.1:g.3318032_3318040del	NW_011332701.1:g.3318033_3318040del	NW_011332701.1:g.3318034_3318040del	NW_011332701.1:g.3318038_3318040del	NW_011332701.1:g.3318039_3318040del	NW_011332701.1:g.3318040del	NW_011332701.1:g.3318040dup	NW_011332701.1:g.3318039_3318040dup	NW_011332701.1:g.3318038_3318040dup	NW_011332701.1:g.3318037_3318040dup
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.3430473_3430492=	NT_187660.1:g.3430484_3430492del	NT_187660.1:g.3430485_3430492del	NT_187660.1:g.3430486_3430492del	NT_187660.1:g.3430490_3430492del	NT_187660.1:g.3430491_3430492del	NT_187660.1:g.3430492del	NT_187660.1:g.3430492dup	NT_187660.1:g.3430491_3430492dup	NT_187660.1:g.3430490_3430492dup	NT_187660.1:g.3430489_3430492dup
TRPM1 transcript variant 1	NM_001252020.1:c.54+16193=	NM_001252020.1:c.54+16185_54+16193del	NM_001252020.1:c.54+16186_54+16193del	NM_001252020.1:c.54+16187_54+16193del	NM_001252020.1:c.54+16191_54+16193del	NM_001252020.1:c.54+16192_54+16193del	NM_001252020.1:c.54+16193del	NM_001252020.1:c.54+16193dup	NM_001252020.1:c.54+16192_54+16193dup	NM_001252020.1:c.54+16191_54+16193dup	NM_001252020.1:c.54+16190_54+16193dup
TRPM1 transcript variant 1	NM_001252020.2:c.54+16193=	NM_001252020.2:c.54+16185_54+16193del	NM_001252020.2:c.54+16186_54+16193del	NM_001252020.2:c.54+16187_54+16193del	NM_001252020.2:c.54+16191_54+16193del	NM_001252020.2:c.54+16192_54+16193del	NM_001252020.2:c.54+16193del	NM_001252020.2:c.54+16193dup	NM_001252020.2:c.54+16192_54+16193dup	NM_001252020.2:c.54+16191_54+16193dup	NM_001252020.2:c.54+16190_54+16193dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

27 SubSNP, 18 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss40608525	Mar 14, 2006 (126)
2	ACPOP	ss3740802369	Jul 13, 2019 (153)
3	EVA	ss3834164038	Apr 27, 2020 (154)
4	GNOMAD	ss4286257936	Apr 26, 2021 (155)
5	GNOMAD	ss4286257937	Apr 26, 2021 (155)
6	GNOMAD	ss4286257938	Apr 26, 2021 (155)
7	GNOMAD	ss4286257939	Apr 26, 2021 (155)
8	GNOMAD	ss4286257941	Apr 26, 2021 (155)
9	GNOMAD	ss4286257942	Apr 26, 2021 (155)
10	GNOMAD	ss4286257943	Apr 26, 2021 (155)
11	GNOMAD	ss4286257944	Apr 26, 2021 (155)
12	GNOMAD	ss4286257945	Apr 26, 2021 (155)
13	TOPMED	ss4986332545	Apr 26, 2021 (155)
14	TOPMED	ss4986332546	Apr 26, 2021 (155)
15	TOPMED	ss4986332547	Apr 26, 2021 (155)
16	TOMMO_GENOMICS	ss5215517285	Apr 26, 2021 (155)
17	TOMMO_GENOMICS	ss5215517286	Apr 26, 2021 (155)
18	1000G_HIGH_COVERAGE	ss5297935565	Oct 16, 2022 (156)
19	1000G_HIGH_COVERAGE	ss5297935567	Oct 16, 2022 (156)
20	1000G_HIGH_COVERAGE	ss5297935568	Oct 16, 2022 (156)
21	1000G_HIGH_COVERAGE	ss5297935569	Oct 16, 2022 (156)
22	HUGCELL_USP	ss5491726272	Oct 16, 2022 (156)
23	HUGCELL_USP	ss5491726273	Oct 16, 2022 (156)
24	HUGCELL_USP	ss5491726274	Oct 16, 2022 (156)
25	TOMMO_GENOMICS	ss5769123357	Oct 16, 2022 (156)
26	TOMMO_GENOMICS	ss5769123358	Oct 16, 2022 (156)
27	YY_MCH	ss5815207776	Oct 16, 2022 (156)
28	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
29	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
30	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
31	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
32	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
33	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
34	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
35	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
36	gnomAD - Genomes Submission ignored due to conflicting rows: Row 464846870 (NC_000015.10:31144712::T 2469/99528) Row 464846871 (NC_000015.10:31144712::TT 570/99550) Row 464846872 (NC_000015.10:31144712::TTT 10/99580)...	-	Apr 26, 2021 (155)
37	Northern Sweden	NC_000015.9 - 31436916	Jul 13, 2019 (153)
38	8.3KJPN Submission ignored due to conflicting rows: Row 73486592 (NC_000015.9:31436915::T 307/16744) Row 73486593 (NC_000015.9:31436915:T: 208/16744)	-	Apr 26, 2021 (155)
39	8.3KJPN Submission ignored due to conflicting rows: Row 73486592 (NC_000015.9:31436915::T 307/16744) Row 73486593 (NC_000015.9:31436915:T: 208/16744)	-	Apr 26, 2021 (155)
40	14KJPN Submission ignored due to conflicting rows: Row 102960461 (NC_000015.10:31144712::T 492/28236) Row 102960462 (NC_000015.10:31144712:T: 309/28236)	-	Oct 16, 2022 (156)
41	14KJPN Submission ignored due to conflicting rows: Row 102960461 (NC_000015.10:31144712::T 492/28236) Row 102960462 (NC_000015.10:31144712:T: 309/28236)	-	Oct 16, 2022 (156)
42	TopMed Submission ignored due to conflicting rows: Row 201878205 (NC_000015.10:31144712:TTTTTTT: 2/264690) Row 201878206 (NC_000015.10:31144712:TTTTTTTT: 1/264690) Row 201878207 (NC_000015.10:31144712:TTTTTTTTT: 1/264690)	-	Apr 26, 2021 (155)
43	TopMed Submission ignored due to conflicting rows: Row 201878205 (NC_000015.10:31144712:TTTTTTT: 2/264690) Row 201878206 (NC_000015.10:31144712:TTTTTTTT: 1/264690) Row 201878207 (NC_000015.10:31144712:TTTTTTTTT: 1/264690)	-	Apr 26, 2021 (155)
44	TopMed Submission ignored due to conflicting rows: Row 201878205 (NC_000015.10:31144712:TTTTTTT: 2/264690) Row 201878206 (NC_000015.10:31144712:TTTTTTTT: 1/264690) Row 201878207 (NC_000015.10:31144712:TTTTTTTTT: 1/264690)	-	Apr 26, 2021 (155)
45	ALFA	NC_000015.10 - 31144713	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4286257945, ss4986332547	NC_000015.10:31144712:TTTTTTTTT:	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss4986332546	NC_000015.10:31144712:TTTTTTTT:	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss4286257944, ss4986332545	NC_000015.10:31144712:TTTTTTT:	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4286257943	NC_000015.10:31144712:TTT:	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss4286257942, ss5297935569	NC_000015.10:31144712:TT:	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
14087234, ss3740802369, ss5215517286	NC_000015.9:31436915:T:	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4286257941, ss5297935567, ss5491726272, ss5769123358, ss5815207776	NC_000015.10:31144712:T:	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss40608525	NT_010194.17:2227472:T:	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss5215517285	NC_000015.9:31436915::T	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4286257936, ss5297935565, ss5491726273, ss5769123357	NC_000015.10:31144712::T	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss3834164038	NC_000015.9:31436915::TT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss4286257937, ss5297935568, ss5491726274	NC_000015.10:31144712::TT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss4286257938	NC_000015.10:31144712::TTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4286257939	NC_000015.10:31144712::TTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	(self)
13955054371	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	NC_000015.10:31144712:TTTTTTTTTTTT… NC_000015.10:31144712:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34583108

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs34583108