Name: rs34800047
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34800047

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:8400510-8400522 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTT / delT / dupT / dupTT / dupT…
delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅ / dup(T)₇ / dup(T)₁₁
Variation Type: Indel Insertion and Deletion
Frequency: dupTT=0.2848 (1858/6524, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC02226 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	6524	TTTTTTTTTTTTT=0.5573	TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0143, TTTTTTTTTTTTTT=0.1429, TTTTTTTTTTTTTTT=0.2848, TTTTTTTTTTTTTTTT=0.0008, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000	0.588138	0.202406	0.209457	32
European	Sub	5496	TTTTTTTTTTTTT=0.4758	TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0169, TTTTTTTTTTTTTT=0.1692, TTTTTTTTTTTTTTT=0.3372, TTTTTTTTTTTTTTTT=0.0009, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000	0.478146	0.255924	0.265929	32
African	Sub	762	TTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	28	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	734	TTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	20	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	14	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	6	TTTTTTTTTTTTT=1.0	TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	24	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	104	TTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	22	TTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	96	TTTTTTTTTTTTT=0.93	TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.02, TTTTTTTTTTTTTTT=0.05, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00	0.956522	0.043478	0.0	25

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	6524	(T)₁₃=0.5573	delTT=0.0000, delT=0.0143, dupT=0.1429, dupTT=0.2848, dupTTT=0.0008, dup(T)₄=0.0000, dup(T)₅=0.0000
Allele Frequency Aggregator	European	Sub	5496	(T)₁₃=0.4758	delTT=0.0000, delT=0.0169, dupT=0.1692, dupTT=0.3372, dupTTT=0.0009, dup(T)₄=0.0000, dup(T)₅=0.0000
Allele Frequency Aggregator	African	Sub	762	(T)₁₃=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000
Allele Frequency Aggregator	Latin American 2	Sub	104	(T)₁₃=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000
Allele Frequency Aggregator	Other	Sub	96	(T)₁₃=0.93	delTT=0.00, delT=0.00, dupT=0.02, dupTT=0.05, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00
Allele Frequency Aggregator	Latin American 1	Sub	24	(T)₁₃=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00
Allele Frequency Aggregator	South Asian	Sub	22	(T)₁₃=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00
Allele Frequency Aggregator	Asian	Sub	20	(T)₁₃=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.8400521_8400522del
GRCh38.p14 chr 5	NC_000005.10:g.8400522del
GRCh38.p14 chr 5	NC_000005.10:g.8400522dup
GRCh38.p14 chr 5	NC_000005.10:g.8400521_8400522dup
GRCh38.p14 chr 5	NC_000005.10:g.8400520_8400522dup
GRCh38.p14 chr 5	NC_000005.10:g.8400519_8400522dup
GRCh38.p14 chr 5	NC_000005.10:g.8400518_8400522dup
GRCh38.p14 chr 5	NC_000005.10:g.8400516_8400522dup
GRCh38.p14 chr 5	NC_000005.10:g.8400512_8400522dup
GRCh37.p13 chr 5	NC_000005.9:g.8400634_8400635del
GRCh37.p13 chr 5	NC_000005.9:g.8400635del
GRCh37.p13 chr 5	NC_000005.9:g.8400635dup
GRCh37.p13 chr 5	NC_000005.9:g.8400634_8400635dup
GRCh37.p13 chr 5	NC_000005.9:g.8400633_8400635dup
GRCh37.p13 chr 5	NC_000005.9:g.8400632_8400635dup
GRCh37.p13 chr 5	NC_000005.9:g.8400631_8400635dup
GRCh37.p13 chr 5	NC_000005.9:g.8400629_8400635dup
GRCh37.p13 chr 5	NC_000005.9:g.8400625_8400635dup

Gene: LINC02226, long intergenic non-protein coding RNA 2226 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC02226 transcript	NR_039984.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₃=	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅	dup(T)₇	dup(T)₁₁
GRCh38.p14 chr 5	NC_000005.10:g.8400510_8400522=	NC_000005.10:g.8400521_8400522del	NC_000005.10:g.8400522del	NC_000005.10:g.8400522dup	NC_000005.10:g.8400521_8400522dup	NC_000005.10:g.8400520_8400522dup	NC_000005.10:g.8400519_8400522dup	NC_000005.10:g.8400518_8400522dup	NC_000005.10:g.8400516_8400522dup	NC_000005.10:g.8400512_8400522dup
GRCh37.p13 chr 5	NC_000005.9:g.8400623_8400635=	NC_000005.9:g.8400634_8400635del	NC_000005.9:g.8400635del	NC_000005.9:g.8400635dup	NC_000005.9:g.8400634_8400635dup	NC_000005.9:g.8400633_8400635dup	NC_000005.9:g.8400632_8400635dup	NC_000005.9:g.8400631_8400635dup	NC_000005.9:g.8400629_8400635dup	NC_000005.9:g.8400625_8400635dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

61 SubSNP, 27 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42456414	Oct 12, 2018 (152)
2	HGSV	ss80835149	Oct 12, 2018 (152)
3	HUMANGENOME_JCVI	ss95385507	Oct 12, 2018 (152)
4	BUSHMAN	ss193785991	Jul 04, 2010 (132)
5	GMI	ss288611909	May 04, 2012 (137)
6	PJP	ss295211628	May 09, 2011 (137)
7	PJP	ss295211629	May 09, 2011 (137)
8	SSMP	ss663626009	Apr 01, 2015 (144)
9	EVA_UK10K_ALSPAC	ss1704554209	Apr 01, 2015 (144)
10	EVA_UK10K_ALSPAC	ss1704554210	Apr 01, 2015 (144)
11	EVA_UK10K_TWINSUK	ss1704554217	Apr 01, 2015 (144)
12	EVA_UK10K_TWINSUK	ss1704554219	Apr 01, 2015 (144)
13	HAMMER_LAB	ss1803030999	Sep 08, 2015 (146)
14	HAMMER_LAB	ss1803031001	Sep 08, 2015 (146)
15	SYSTEMSBIOZJU	ss2625919728	Nov 08, 2017 (151)
16	SWEGEN	ss2996409922	Nov 08, 2017 (151)
17	MCHAISSO	ss3065015463	Nov 08, 2017 (151)
18	URBANLAB	ss3647981657	Oct 12, 2018 (152)
19	EVA_DECODE	ss3714069720	Jul 13, 2019 (153)
20	EVA_DECODE	ss3714069721	Jul 13, 2019 (153)
21	EVA_DECODE	ss3714069722	Jul 13, 2019 (153)
22	EVA_DECODE	ss3714069723	Jul 13, 2019 (153)
23	EVA_DECODE	ss3714069724	Jul 13, 2019 (153)
24	ACPOP	ss3732073023	Jul 13, 2019 (153)
25	ACPOP	ss3732073024	Jul 13, 2019 (153)
26	ACPOP	ss3732073025	Jul 13, 2019 (153)
27	PACBIO	ss3785018678	Jul 13, 2019 (153)
28	KHV_HUMAN_GENOMES	ss3806211169	Jul 13, 2019 (153)
29	EVA	ss3829085213	Apr 26, 2020 (154)
30	EVA	ss3838004903	Apr 26, 2020 (154)
31	EVA	ss3843444568	Apr 26, 2020 (154)
32	KOGIC	ss3956063228	Apr 26, 2020 (154)
33	KOGIC	ss3956063229	Apr 26, 2020 (154)
34	KOGIC	ss3956063230	Apr 26, 2020 (154)
35	KOGIC	ss3956063231	Apr 26, 2020 (154)
36	GNOMAD	ss4098983797	Apr 26, 2021 (155)
37	GNOMAD	ss4098983798	Apr 26, 2021 (155)
38	GNOMAD	ss4098983799	Apr 26, 2021 (155)
39	GNOMAD	ss4098983800	Apr 26, 2021 (155)
40	GNOMAD	ss4098983801	Apr 26, 2021 (155)
41	GNOMAD	ss4098983803	Apr 26, 2021 (155)
42	GNOMAD	ss4098983804	Apr 26, 2021 (155)
43	TOMMO_GENOMICS	ss5170302112	Apr 26, 2021 (155)
44	TOMMO_GENOMICS	ss5170302113	Apr 26, 2021 (155)
45	TOMMO_GENOMICS	ss5170302114	Apr 26, 2021 (155)
46	TOMMO_GENOMICS	ss5170302115	Apr 26, 2021 (155)
47	1000G_HIGH_COVERAGE	ss5262814924	Oct 13, 2022 (156)
48	1000G_HIGH_COVERAGE	ss5262814925	Oct 13, 2022 (156)
49	1000G_HIGH_COVERAGE	ss5262814926	Oct 13, 2022 (156)
50	1000G_HIGH_COVERAGE	ss5262814927	Oct 13, 2022 (156)
51	1000G_HIGH_COVERAGE	ss5262814928	Oct 13, 2022 (156)
52	HUGCELL_USP	ss5461166511	Oct 13, 2022 (156)
53	HUGCELL_USP	ss5461166512	Oct 13, 2022 (156)
54	HUGCELL_USP	ss5461166513	Oct 13, 2022 (156)
55	HUGCELL_USP	ss5461166514	Oct 13, 2022 (156)
56	TOMMO_GENOMICS	ss5705953537	Oct 13, 2022 (156)
57	TOMMO_GENOMICS	ss5705953538	Oct 13, 2022 (156)
58	TOMMO_GENOMICS	ss5705953539	Oct 13, 2022 (156)
59	TOMMO_GENOMICS	ss5705953540	Oct 13, 2022 (156)
60	EVA	ss5834494620	Oct 13, 2022 (156)
61	EVA	ss5834494621	Oct 13, 2022 (156)
62	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 14123654 (NC_000005.9:8400622::TT 2039/3854) Row 14123655 (NC_000005.9:8400622::TTT 169/3854)	-	Oct 12, 2018 (152)
63	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 14123654 (NC_000005.9:8400622::TT 2039/3854) Row 14123655 (NC_000005.9:8400622::TTT 169/3854)	-	Oct 12, 2018 (152)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179414009 (NC_000005.10:8400509::T 31322/134396) Row 179414010 (NC_000005.10:8400509::TT 42402/134364) Row 179414011 (NC_000005.10:8400509::TTT 283/134518)...	-	Apr 26, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179414009 (NC_000005.10:8400509::T 31322/134396) Row 179414010 (NC_000005.10:8400509::TT 42402/134364) Row 179414011 (NC_000005.10:8400509::TTT 283/134518)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179414009 (NC_000005.10:8400509::T 31322/134396) Row 179414010 (NC_000005.10:8400509::TT 42402/134364) Row 179414011 (NC_000005.10:8400509::TTT 283/134518)...	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179414009 (NC_000005.10:8400509::T 31322/134396) Row 179414010 (NC_000005.10:8400509::TT 42402/134364) Row 179414011 (NC_000005.10:8400509::TTT 283/134518)...	-	Apr 26, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179414009 (NC_000005.10:8400509::T 31322/134396) Row 179414010 (NC_000005.10:8400509::TT 42402/134364) Row 179414011 (NC_000005.10:8400509::TTT 283/134518)...	-	Apr 26, 2021 (155)
69	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179414009 (NC_000005.10:8400509::T 31322/134396) Row 179414010 (NC_000005.10:8400509::TT 42402/134364) Row 179414011 (NC_000005.10:8400509::TTT 283/134518)...	-	Apr 26, 2021 (155)
70	gnomAD - Genomes Submission ignored due to conflicting rows: Row 179414009 (NC_000005.10:8400509::T 31322/134396) Row 179414010 (NC_000005.10:8400509::TT 42402/134364) Row 179414011 (NC_000005.10:8400509::TTT 283/134518)...	-	Apr 26, 2021 (155)
71	Korean Genome Project Submission ignored due to conflicting rows: Row 12441229 (NC_000005.10:8400510::T 483/1832) Row 12441230 (NC_000005.10:8400510::TT 493/1832) Row 12441231 (NC_000005.10:8400509:T: 63/1832)...	-	Apr 26, 2020 (154)
72	Korean Genome Project Submission ignored due to conflicting rows: Row 12441229 (NC_000005.10:8400510::T 483/1832) Row 12441230 (NC_000005.10:8400510::TT 493/1832) Row 12441231 (NC_000005.10:8400509:T: 63/1832)...	-	Apr 26, 2020 (154)
73	Korean Genome Project Submission ignored due to conflicting rows: Row 12441229 (NC_000005.10:8400510::T 483/1832) Row 12441230 (NC_000005.10:8400510::TT 493/1832) Row 12441231 (NC_000005.10:8400509:T: 63/1832)...	-	Apr 26, 2020 (154)
74	Korean Genome Project Submission ignored due to conflicting rows: Row 12441229 (NC_000005.10:8400510::T 483/1832) Row 12441230 (NC_000005.10:8400510::TT 493/1832) Row 12441231 (NC_000005.10:8400509:T: 63/1832)...	-	Apr 26, 2020 (154)
75	Northern Sweden Submission ignored due to conflicting rows: Row 5357888 (NC_000005.9:8400622::T 76/598) Row 5357889 (NC_000005.9:8400622::TT 256/598) Row 5357890 (NC_000005.9:8400622:T: 8/598)	-	Jul 13, 2019 (153)
76	Northern Sweden Submission ignored due to conflicting rows: Row 5357888 (NC_000005.9:8400622::T 76/598) Row 5357889 (NC_000005.9:8400622::TT 256/598) Row 5357890 (NC_000005.9:8400622:T: 8/598)	-	Jul 13, 2019 (153)
77	Northern Sweden Submission ignored due to conflicting rows: Row 5357888 (NC_000005.9:8400622::T 76/598) Row 5357889 (NC_000005.9:8400622::TT 256/598) Row 5357890 (NC_000005.9:8400622:T: 8/598)	-	Jul 13, 2019 (153)
78	8.3KJPN Submission ignored due to conflicting rows: Row 28271419 (NC_000005.9:8400622::TT 4322/16760) Row 28271420 (NC_000005.9:8400622::T 5046/16760) Row 28271421 (NC_000005.9:8400622:T: 637/16760)...	-	Apr 26, 2021 (155)
79	8.3KJPN Submission ignored due to conflicting rows: Row 28271419 (NC_000005.9:8400622::TT 4322/16760) Row 28271420 (NC_000005.9:8400622::T 5046/16760) Row 28271421 (NC_000005.9:8400622:T: 637/16760)...	-	Apr 26, 2021 (155)
80	8.3KJPN Submission ignored due to conflicting rows: Row 28271419 (NC_000005.9:8400622::TT 4322/16760) Row 28271420 (NC_000005.9:8400622::T 5046/16760) Row 28271421 (NC_000005.9:8400622:T: 637/16760)...	-	Apr 26, 2021 (155)
81	8.3KJPN Submission ignored due to conflicting rows: Row 28271419 (NC_000005.9:8400622::TT 4322/16760) Row 28271420 (NC_000005.9:8400622::T 5046/16760) Row 28271421 (NC_000005.9:8400622:T: 637/16760)...	-	Apr 26, 2021 (155)
82	14KJPN Submission ignored due to conflicting rows: Row 39790641 (NC_000005.10:8400509::TT 7282/28258) Row 39790642 (NC_000005.10:8400509::T 8567/28258) Row 39790643 (NC_000005.10:8400509:T: 1004/28258)...	-	Oct 13, 2022 (156)
83	14KJPN Submission ignored due to conflicting rows: Row 39790641 (NC_000005.10:8400509::TT 7282/28258) Row 39790642 (NC_000005.10:8400509::T 8567/28258) Row 39790643 (NC_000005.10:8400509:T: 1004/28258)...	-	Oct 13, 2022 (156)
84	14KJPN Submission ignored due to conflicting rows: Row 39790641 (NC_000005.10:8400509::TT 7282/28258) Row 39790642 (NC_000005.10:8400509::T 8567/28258) Row 39790643 (NC_000005.10:8400509:T: 1004/28258)...	-	Oct 13, 2022 (156)
85	14KJPN Submission ignored due to conflicting rows: Row 39790641 (NC_000005.10:8400509::TT 7282/28258) Row 39790642 (NC_000005.10:8400509::T 8567/28258) Row 39790643 (NC_000005.10:8400509:T: 1004/28258)...	-	Oct 13, 2022 (156)
86	UK 10K study - Twins Submission ignored due to conflicting rows: Row 14123654 (NC_000005.9:8400622::TT 1936/3708) Row 14123655 (NC_000005.9:8400622::TTT 193/3708)	-	Oct 12, 2018 (152)
87	UK 10K study - Twins Submission ignored due to conflicting rows: Row 14123654 (NC_000005.9:8400622::TT 1936/3708) Row 14123655 (NC_000005.9:8400622::TTT 193/3708)	-	Oct 12, 2018 (152)
88	ALFA	NC_000005.10 - 8400510	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs35990477	May 11, 2012 (137)
rs60746315	May 26, 2008 (130)
rs66883161	Jul 30, 2012 (137)
rs66883162	Feb 26, 2009 (130)
rs138284746	May 11, 2012 (137)
rs142882757	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4098983804, ss5262814928	NC_000005.10:8400509:TT:	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTT	(self)
38241119	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss1803031001, ss2996409922, ss3732073025, ss3785018678, ss5170302114	NC_000005.9:8400622:T:	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss3714069720, ss3956063230, ss4098983803, ss5262814926, ss5461166514, ss5705953539	NC_000005.10:8400509:T:	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
38241119	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss193785991	NT_006576.17:8390509:T:	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss288611909	NC_000005.8:8453635::T	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss663626009, ss1803030999, ss2625919728, ss3732073023, ss3829085213, ss5170302113	NC_000005.9:8400622::T	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3806211169, ss4098983797, ss5262814924, ss5461166513, ss5705953538	NC_000005.10:8400509::T	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
38241119	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3714069721, ss3956063228	NC_000005.10:8400510::T	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss295211628	NC_000005.8:8453623::TT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss295211629	NC_000005.8:8453634::TT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss1704554209, ss1704554217, ss3732073024, ss3838004903, ss5170302112, ss5834494620	NC_000005.9:8400622::TT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3065015463, ss3647981657, ss3843444568, ss4098983798, ss5262814925, ss5461166511, ss5705953537	NC_000005.10:8400509::TT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
38241119	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3714069722, ss3956063229	NC_000005.10:8400510::TT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss42456414, ss80835149, ss95385507	NT_006576.16:8390635::TT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss1704554210, ss1704554219, ss5170302115, ss5834494621	NC_000005.9:8400622::TTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4098983799, ss5262814927, ss5461166512, ss5705953540	NC_000005.10:8400509::TTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
38241119	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3714069723, ss3956063231	NC_000005.10:8400510::TTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4098983800	NC_000005.10:8400509::TTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
38241119	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
38241119	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4098983801	NC_000005.10:8400509::TTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss3714069724	NC_000005.10:8400510::TTTTTTTTTTT	NC_000005.10:8400509:TTTTTTTTTTTTT… NC_000005.10:8400509:TTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34800047

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs34800047