Name: rs34885580
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34885580

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr17:54919803-54919812 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTT / delT / dupT / dupTT
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.277324 (73405/264690, TOPMED)
delT=0.16983 (4799/28258, 14KJPN)
delT=0.17291 (2898/16760, 8.3KJPN) (+ 6 more)
delT=0.16074 (1998/12430, ALFA)
delT=0.2445 (1211/4953, 1000G)
delT=0.2920 (1308/4480, Estonian)
delT=0.2123 (389/1832, Korea1K)
delT=0.207 (124/600, NorthernSweden)
delT=0.42 (17/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TOM1L1 : Intron Variant
LOC124904032 : 500B Downstream Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	12430	TTTTTTTTTT=0.83926	TTTTTTTT=0.00000, TTTTTTTTT=0.16074, TTTTTTTTTTT=0.00000, TTTTTTTTTTTT=0.00000	0.726951	0.048431	0.224618	32
European	Sub	10134	TTTTTTTTTT=0.80570	TTTTTTTT=0.00000, TTTTTTTTT=0.19430, TTTTTTTTTTT=0.00000, TTTTTTTTTTTT=0.00000	0.670219	0.058812	0.270969	32
African	Sub	1470	TTTTTTTTTT=0.9871	TTTTTTTT=0.0000, TTTTTTTTT=0.0129, TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000	0.978231	0.004082	0.017687	N/A
African Others	Sub	46	TTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	1424	TTTTTTTTTT=0.9867	TTTTTTTT=0.0000, TTTTTTTTT=0.0133, TTTTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000	0.977528	0.004213	0.018258	34
Asian	Sub	58	TTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	44	TTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	14	TTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	66	TTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	364	TTTTTTTTTT=1.000	TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	68	TTTTTTTTTT=0.99	TTTTTTTT=0.00, TTTTTTTTT=0.01, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00	0.970588	0.0	0.029412	0
Other	Sub	270	TTTTTTTTTT=0.967	TTTTTTTT=0.000, TTTTTTTTT=0.033, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000	0.933333	0.0	0.066667	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(T)₁₀=0.722676	delT=0.277324
14KJPN	JAPANESE	Study-wide	28258	(T)₁₀=0.83017	delT=0.16983
8.3KJPN	JAPANESE	Study-wide	16760	(T)₁₀=0.82709	delT=0.17291
Allele Frequency Aggregator	Total	Global	12430	(T)₁₀=0.83926	delTT=0.00000, delT=0.16074, dupT=0.00000, dupTT=0.00000
Allele Frequency Aggregator	European	Sub	10134	(T)₁₀=0.80570	delTT=0.00000, delT=0.19430, dupT=0.00000, dupTT=0.00000
Allele Frequency Aggregator	African	Sub	1470	(T)₁₀=0.9871	delTT=0.0000, delT=0.0129, dupT=0.0000, dupTT=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	364	(T)₁₀=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Other	Sub	270	(T)₁₀=0.967	delTT=0.000, delT=0.033, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	South Asian	Sub	68	(T)₁₀=0.99	delTT=0.00, delT=0.01, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	66	(T)₁₀=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	Asian	Sub	58	(T)₁₀=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
1000Genomes	Global	Study-wide	4953	(T)₁₀=0.7555	delT=0.2445
1000Genomes	African	Sub	1272	(T)₁₀=0.7484	delT=0.2516
1000Genomes	East Asian	Sub	1008	(T)₁₀=0.7550	delT=0.2450
1000Genomes	Europe	Sub	1004	(T)₁₀=0.6833	delT=0.3167
1000Genomes	South Asian	Sub	977	(T)₁₀=0.811	delT=0.189
1000Genomes	American	Sub	692	(T)₁₀=0.796	delT=0.204
Genetic variation in the Estonian population	Estonian	Study-wide	4480	(T)₁₀=0.7080	delT=0.2920
Korean Genome Project	KOREAN	Study-wide	1832	(T)₁₀=0.7877	delT=0.2123
Northern Sweden	ACPOP	Study-wide	600	(T)₁₀=0.793	delT=0.207
The Danish reference pan genome	Danish	Study-wide	40	(T)₁₀=0.57	delT=0.42

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 17	NC_000017.11:g.54919811_54919812del
GRCh38.p14 chr 17	NC_000017.11:g.54919812del
GRCh38.p14 chr 17	NC_000017.11:g.54919812dup
GRCh38.p14 chr 17	NC_000017.11:g.54919811_54919812dup
GRCh37.p13 chr 17	NC_000017.10:g.52997172_52997173del
GRCh37.p13 chr 17	NC_000017.10:g.52997173del
GRCh37.p13 chr 17	NC_000017.10:g.52997173dup
GRCh37.p13 chr 17	NC_000017.10:g.52997172_52997173dup

Gene: TOM1L1, target of myb1 like 1 membrane trafficking protein (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TOM1L1 transcript variant 2	NM_001321173.2:c.720+3949… NM_001321173.2:c.720+3949_720+3950del	N/A	Intron Variant
TOM1L1 transcript variant 3	NM_001321174.2:c.489+3949… NM_001321174.2:c.489+3949_489+3950del	N/A	Intron Variant
TOM1L1 transcript variant 4	NM_001321175.2:c.489+3949… NM_001321175.2:c.489+3949_489+3950del	N/A	Intron Variant
TOM1L1 transcript variant 5	NM_001321176.2:c.489+3949… NM_001321176.2:c.489+3949_489+3950del	N/A	Intron Variant
TOM1L1 transcript variant 1	NM_005486.3:c.720+3949_72… NM_005486.3:c.720+3949_720+3950del	N/A	Intron Variant
TOM1L1 transcript variant X1	XM_047435067.1:c.720+3949… XM_047435067.1:c.720+3949_720+3950del	N/A	Intron Variant
TOM1L1 transcript variant X3	XM_047435068.1:c.720+3949… XM_047435068.1:c.720+3949_720+3950del	N/A	Intron Variant
TOM1L1 transcript variant X4	XM_047435069.1:c.615+3949… XM_047435069.1:c.615+3949_615+3950del	N/A	Intron Variant
TOM1L1 transcript variant X2	XR_243612.4:n.	N/A	Intron Variant

Gene: LOC124904032, uncharacterized LOC124904032 (minus strand) : 500B Downstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
LOC124904032 transcript	XR_007065853.1:n.	N/A	Downstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₀=	delTT	delT	dupT	dupTT
GRCh38.p14 chr 17	NC_000017.11:g.54919803_54919812=	NC_000017.11:g.54919811_54919812del	NC_000017.11:g.54919812del	NC_000017.11:g.54919812dup	NC_000017.11:g.54919811_54919812dup
GRCh37.p13 chr 17	NC_000017.10:g.52997164_52997173=	NC_000017.10:g.52997172_52997173del	NC_000017.10:g.52997173del	NC_000017.10:g.52997173dup	NC_000017.10:g.52997172_52997173dup
TOM1L1 transcript variant 2	NM_001321173.2:c.720+3941=	NM_001321173.2:c.720+3949_720+3950del	NM_001321173.2:c.720+3950del	NM_001321173.2:c.720+3950dup	NM_001321173.2:c.720+3949_720+3950dup
TOM1L1 transcript variant 3	NM_001321174.2:c.489+3941=	NM_001321174.2:c.489+3949_489+3950del	NM_001321174.2:c.489+3950del	NM_001321174.2:c.489+3950dup	NM_001321174.2:c.489+3949_489+3950dup
TOM1L1 transcript variant 4	NM_001321175.2:c.489+3941=	NM_001321175.2:c.489+3949_489+3950del	NM_001321175.2:c.489+3950del	NM_001321175.2:c.489+3950dup	NM_001321175.2:c.489+3949_489+3950dup
TOM1L1 transcript variant 5	NM_001321176.2:c.489+3941=	NM_001321176.2:c.489+3949_489+3950del	NM_001321176.2:c.489+3950del	NM_001321176.2:c.489+3950dup	NM_001321176.2:c.489+3949_489+3950dup
TOM1L1 transcript variant 1	NM_005486.2:c.720+3941=	NM_005486.2:c.720+3949_720+3950del	NM_005486.2:c.720+3950del	NM_005486.2:c.720+3950dup	NM_005486.2:c.720+3949_720+3950dup
TOM1L1 transcript variant 1	NM_005486.3:c.720+3941=	NM_005486.3:c.720+3949_720+3950del	NM_005486.3:c.720+3950del	NM_005486.3:c.720+3950dup	NM_005486.3:c.720+3949_720+3950dup
TOM1L1 transcript variant X1	XM_005256913.1:c.699+3941=	XM_005256913.1:c.699+3949_699+3950del	XM_005256913.1:c.699+3950del	XM_005256913.1:c.699+3950dup	XM_005256913.1:c.699+3949_699+3950dup
TOM1L1 transcript variant X2	XM_005256914.1:c.489+3941=	XM_005256914.1:c.489+3949_489+3950del	XM_005256914.1:c.489+3950del	XM_005256914.1:c.489+3950dup	XM_005256914.1:c.489+3949_489+3950dup
TOM1L1 transcript variant X3	XM_005256915.1:c.489+3941=	XM_005256915.1:c.489+3949_489+3950del	XM_005256915.1:c.489+3950del	XM_005256915.1:c.489+3950dup	XM_005256915.1:c.489+3949_489+3950dup
TOM1L1 transcript variant X4	XM_005256916.1:c.489+3941=	XM_005256916.1:c.489+3949_489+3950del	XM_005256916.1:c.489+3950del	XM_005256916.1:c.489+3950dup	XM_005256916.1:c.489+3949_489+3950dup
TOM1L1 transcript variant X1	XM_047435067.1:c.720+3941=	XM_047435067.1:c.720+3949_720+3950del	XM_047435067.1:c.720+3950del	XM_047435067.1:c.720+3950dup	XM_047435067.1:c.720+3949_720+3950dup
TOM1L1 transcript variant X3	XM_047435068.1:c.720+3941=	XM_047435068.1:c.720+3949_720+3950del	XM_047435068.1:c.720+3950del	XM_047435068.1:c.720+3950dup	XM_047435068.1:c.720+3949_720+3950dup
TOM1L1 transcript variant X4	XM_047435069.1:c.615+3941=	XM_047435069.1:c.615+3949_615+3950del	XM_047435069.1:c.615+3950del	XM_047435069.1:c.615+3950dup	XM_047435069.1:c.615+3949_615+3950dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

48 SubSNP, 13 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss40757892	Mar 14, 2006 (126)
2	HGSV	ss82348298	Sep 08, 2015 (146)
3	HUMANGENOME_JCVI	ss95696728	Feb 04, 2009 (130)
4	GMI	ss289330581	May 04, 2012 (137)
5	PJP	ss294917408	May 09, 2011 (137)
6	PJP	ss294917409	May 09, 2011 (134)
7	1000GENOMES	ss327794286	May 09, 2011 (137)
8	1000GENOMES	ss327920465	May 09, 2011 (137)
9	1000GENOMES	ss328223830	May 09, 2011 (137)
10	LUNTER	ss552531687	Apr 25, 2013 (138)
11	LUNTER	ss552884401	Apr 25, 2013 (138)
12	LUNTER	ss553621587	Apr 25, 2013 (138)
13	SSMP	ss664364473	Apr 01, 2015 (144)
14	BILGI_BIOE	ss666694687	Apr 25, 2013 (138)
15	1000GENOMES	ss1376758032	Aug 21, 2014 (142)
16	1000GENOMES	ss1376758035	Aug 21, 2014 (142)
17	EVA_GENOME_DK	ss1575063724	Apr 01, 2015 (144)
18	HAMMER_LAB	ss1808817504	Sep 08, 2015 (146)
19	JJLAB	ss2031341596	Sep 14, 2016 (149)
20	SWEGEN	ss3015675770	Nov 08, 2017 (151)
21	BEROUKHIMLAB	ss3644413913	Oct 12, 2018 (152)
22	BIOINF_KMB_FNS_UNIBA	ss3645458202	Oct 12, 2018 (152)
23	URBANLAB	ss3650673425	Oct 12, 2018 (152)
24	EGCUT_WGS	ss3682552342	Jul 13, 2019 (153)
25	EVA_DECODE	ss3700633901	Jul 13, 2019 (153)
26	EVA_DECODE	ss3700633902	Jul 13, 2019 (153)
27	ACPOP	ss3742098250	Jul 13, 2019 (153)
28	KHV_HUMAN_GENOMES	ss3820032379	Jul 13, 2019 (153)
29	KHV_HUMAN_GENOMES	ss3820032380	Jul 13, 2019 (153)
30	EVA	ss3834909667	Apr 27, 2020 (154)
31	EVA	ss3841067752	Apr 27, 2020 (154)
32	EVA	ss3846564921	Apr 27, 2020 (154)
33	KOGIC	ss3979004859	Apr 27, 2020 (154)
34	GNOMAD	ss4313107238	Apr 27, 2021 (155)
35	GNOMAD	ss4313107239	Apr 27, 2021 (155)
36	GNOMAD	ss4313107240	Apr 27, 2021 (155)
37	GNOMAD	ss4313107241	Apr 27, 2021 (155)
38	TOPMED	ss5038905570	Apr 27, 2021 (155)
39	TOMMO_GENOMICS	ss5222818174	Apr 27, 2021 (155)
40	1000G_HIGH_COVERAGE	ss5303429489	Oct 16, 2022 (156)
41	1000G_HIGH_COVERAGE	ss5303429490	Oct 16, 2022 (156)
42	HUGCELL_USP	ss5496446188	Oct 16, 2022 (156)
43	HUGCELL_USP	ss5496446189	Oct 16, 2022 (156)
44	TOMMO_GENOMICS	ss5779153393	Oct 16, 2022 (156)
45	YY_MCH	ss5816610432	Oct 16, 2022 (156)
46	EVA	ss5834098296	Oct 16, 2022 (156)
47	EVA	ss5851839937	Oct 16, 2022 (156)
48	EVA	ss5914263798	Oct 16, 2022 (156)
49	1000Genomes	NC_000017.10 - 52997164	Oct 12, 2018 (152)
50	Genetic variation in the Estonian population	NC_000017.10 - 52997164	Oct 12, 2018 (152)
51	The Danish reference pan genome	NC_000017.10 - 52997164	Apr 27, 2020 (154)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 509730159 (NC_000017.11:54919802::T 1648/138600) Row 509730160 (NC_000017.11:54919802::TT 2/138614) Row 509730161 (NC_000017.11:54919802:T: 39805/138518)...	-	Apr 27, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 509730159 (NC_000017.11:54919802::T 1648/138600) Row 509730160 (NC_000017.11:54919802::TT 2/138614) Row 509730161 (NC_000017.11:54919802:T: 39805/138518)...	-	Apr 27, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 509730159 (NC_000017.11:54919802::T 1648/138600) Row 509730160 (NC_000017.11:54919802::TT 2/138614) Row 509730161 (NC_000017.11:54919802:T: 39805/138518)...	-	Apr 27, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 509730159 (NC_000017.11:54919802::T 1648/138600) Row 509730160 (NC_000017.11:54919802::TT 2/138614) Row 509730161 (NC_000017.11:54919802:T: 39805/138518)...	-	Apr 27, 2021 (155)
56	Korean Genome Project	NC_000017.11 - 54919803	Apr 27, 2020 (154)
57	Northern Sweden	NC_000017.10 - 52997164	Jul 13, 2019 (153)
58	8.3KJPN	NC_000017.10 - 52997164	Apr 27, 2021 (155)
59	14KJPN	NC_000017.11 - 54919803	Oct 16, 2022 (156)
60	TopMed	NC_000017.11 - 54919803	Apr 27, 2021 (155)
61	ALFA	NC_000017.11 - 54919803	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57989994	May 24, 2008 (130)
rs138412246	May 11, 2012 (137)
rs146209160	Sep 17, 2011 (135)
rs369180878	May 13, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4313107241	NC_000017.11:54919802:TT:	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTT	(self)
3433060204	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTT	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTT	(self)
ss289330581, ss294917408, ss327794286, ss327920465, ss328223830, ss552531687, ss552884401, ss553621587	NC_000017.9:50352162:T:	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTT	(self)
ss82348298, ss294917409	NC_000017.9:50352171:T:	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTT	(self)
72237856, 28290590, 567212, 15383115, 80787481, ss664364473, ss666694687, ss1376758032, ss1575063724, ss1808817504, ss2031341596, ss3015675770, ss3644413913, ss3682552342, ss3742098250, ss3834909667, ss3841067752, ss5222818174, ss5834098296	NC_000017.10:52997163:T:	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTT	(self)
35382860, 112990497, 254451232, ss3645458202, ss3650673425, ss3700633901, ss3820032379, ss3846564921, ss3979004859, ss4313107240, ss5038905570, ss5303429489, ss5496446188, ss5779153393, ss5816610432, ss5851839937, ss5914263798	NC_000017.11:54919802:T:	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTT	(self)
3433060204	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTT	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTT	(self)
ss40757892, ss95696728	NT_010783.15:18271324:T:	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTT	(self)
ss1376758035	NC_000017.10:52997164::T	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTTTT	(self)
ss4313107238, ss5303429490, ss5496446189	NC_000017.11:54919802::T	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTTTT	(self)
3433060204	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTTTT	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTTTT	(self)
ss3700633902, ss3820032380	NC_000017.11:54919803::T	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTTTT	(self)
ss4313107239	NC_000017.11:54919802::TT	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTTTTT	(self)
3433060204	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTTTTT	NC_000017.11:54919802:TTTTTTTTTT:T… NC_000017.11:54919802:TTTTTTTTTT:TTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34885580

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs34885580