Name: rs35302229
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35302229

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr14:24221288-24221302 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₇ / del(T)₆ / del(T)₅ / del(…
del(T)₇ / del(T)₆ / del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dup(T)₄
Variation Type: Indel Insertion and Deletion
Frequency: del(T)₇=0.000011 (3/264690, TOPMED)
dupT=0.00809 (107/13234, ALFA)
delT=0.1631 (817/5008, 1000G) (+ 1 more)
dupT=0.17 (7/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: NEDD8 : Intron Variant
NEDD8-MDP1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	13234	TTTTTTTTTTTTTTT=0.98957	TTTTTTTT=0.00000, TTTTTTTTT=0.00000, TTTTTTTTTT=0.00000, TTTTTTTTTTT=0.00000, TTTTTTTTTTTT=0.00000, TTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTT=0.00219, TTTTTTTTTTTTTTTT=0.00809, TTTTTTTTTTTTTTTTT=0.00015	0.984664	0.000911	0.014425	32
European	Sub	11244	TTTTTTTTTTTTTTT=0.98782	TTTTTTTT=0.00000, TTTTTTTTT=0.00000, TTTTTTTTTT=0.00000, TTTTTTTTTTT=0.00000, TTTTTTTTTTTT=0.00000, TTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTT=0.00258, TTTTTTTTTTTTTTTT=0.00943, TTTTTTTTTTTTTTTTT=0.00018	0.982114	0.001073	0.016813	33
African	Sub	904	TTTTTTTTTTTTTTT=1.000	TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	36	TTTTTTTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	868	TTTTTTTTTTTTTTT=1.000	TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	70	TTTTTTTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	58	TTTTTTTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	12	TTTTTTTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	96	TTTTTTTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	534	TTTTTTTTTTTTTTT=1.000	TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	58	TTTTTTTTTTTTTTT=1.00	TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	328	TTTTTTTTTTTTTTT=0.997	TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.003, TTTTTTTTTTTTTTTTT=0.000	0.993902	0.0	0.006098	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(T)₁₅=0.999989	del(T)₇=0.000011
Allele Frequency Aggregator	Total	Global	13234	(T)₁₅=0.98957	del(T)₇=0.00000, del(T)₆=0.00000, del(T)₅=0.00000, del(T)₄=0.00000, delTTT=0.00000, delTT=0.00000, delT=0.00219, dupT=0.00809, dupTT=0.00015
Allele Frequency Aggregator	European	Sub	11244	(T)₁₅=0.98782	del(T)₇=0.00000, del(T)₆=0.00000, del(T)₅=0.00000, del(T)₄=0.00000, delTTT=0.00000, delTT=0.00000, delT=0.00258, dupT=0.00943, dupTT=0.00018
Allele Frequency Aggregator	African	Sub	904	(T)₁₅=1.000	del(T)₇=0.000, del(T)₆=0.000, del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Latin American 2	Sub	534	(T)₁₅=1.000	del(T)₇=0.000, del(T)₆=0.000, del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Other	Sub	328	(T)₁₅=0.997	del(T)₇=0.000, del(T)₆=0.000, del(T)₅=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.003, dupTT=0.000
Allele Frequency Aggregator	Latin American 1	Sub	96	(T)₁₅=1.00	del(T)₇=0.00, del(T)₆=0.00, del(T)₅=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	Asian	Sub	70	(T)₁₅=1.00	del(T)₇=0.00, del(T)₆=0.00, del(T)₅=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	South Asian	Sub	58	(T)₁₅=1.00	del(T)₇=0.00, del(T)₆=0.00, del(T)₅=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00
1000Genomes	Global	Study-wide	5008	(T)₁₅=0.8369	delT=0.1631
1000Genomes	African	Sub	1322	(T)₁₅=0.5401	delT=0.4599
1000Genomes	East Asian	Sub	1008	(T)₁₅=0.9405	delT=0.0595
1000Genomes	Europe	Sub	1006	(T)₁₅=0.9433	delT=0.0567
1000Genomes	South Asian	Sub	978	(T)₁₅=0.955	delT=0.045
1000Genomes	American	Sub	694	(T)₁₅=0.931	delT=0.069
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupT=0.17

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 14	NC_000014.9:g.24221296_24221302del
GRCh38.p14 chr 14	NC_000014.9:g.24221297_24221302del
GRCh38.p14 chr 14	NC_000014.9:g.24221298_24221302del
GRCh38.p14 chr 14	NC_000014.9:g.24221299_24221302del
GRCh38.p14 chr 14	NC_000014.9:g.24221300_24221302del
GRCh38.p14 chr 14	NC_000014.9:g.24221301_24221302del
GRCh38.p14 chr 14	NC_000014.9:g.24221302del
GRCh38.p14 chr 14	NC_000014.9:g.24221302dup
GRCh38.p14 chr 14	NC_000014.9:g.24221301_24221302dup
GRCh38.p14 chr 14	NC_000014.9:g.24221299_24221302dup
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16092_16098del
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16093_16098del
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16094_16098del
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16095_16098del
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16096_16098del
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16097_16098del
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16098del
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16098dup
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16097_16098dup
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16095_16098dup
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522274_522280del
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522275_522280del
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522276_522280del
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522277_522280del
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522278_522280del
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522279_522280del
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522280del
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522280dup
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522279_522280dup
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522277_522280dup
GRCh37.p13 chr 14	NC_000014.8:g.24690502_24690508del
GRCh37.p13 chr 14	NC_000014.8:g.24690503_24690508del
GRCh37.p13 chr 14	NC_000014.8:g.24690504_24690508del
GRCh37.p13 chr 14	NC_000014.8:g.24690505_24690508del
GRCh37.p13 chr 14	NC_000014.8:g.24690506_24690508del
GRCh37.p13 chr 14	NC_000014.8:g.24690507_24690508del
GRCh37.p13 chr 14	NC_000014.8:g.24690508del
GRCh37.p13 chr 14	NC_000014.8:g.24690508dup
GRCh37.p13 chr 14	NC_000014.8:g.24690507_24690508dup
GRCh37.p13 chr 14	NC_000014.8:g.24690505_24690508dup

Gene: NEDD8-MDP1, NEDD8-MDP1 readthrough (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
NEDD8-MDP1 transcript variant 1	NM_001199823.3:c.19-2863_… NM_001199823.3:c.19-2863_19-2857del	N/A	Intron Variant
NEDD8-MDP1 transcript variant 2	NR_137630.2:n.	N/A	Intron Variant
NEDD8-MDP1 transcript variant 3	NR_137631.2:n.	N/A	Intron Variant
NEDD8-MDP1 transcript variant 4	NR_137632.2:n.	N/A	Intron Variant

Gene: NEDD8, NEDD8 ubiquitin like modifier (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
NEDD8 transcript	NM_006156.3:c.19-2863_19-… NM_006156.3:c.19-2863_19-2857del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₅=	del(T)₇	del(T)₆	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dup(T)₄
GRCh38.p14 chr 14	NC_000014.9:g.24221288_24221302=	NC_000014.9:g.24221296_24221302del	NC_000014.9:g.24221297_24221302del	NC_000014.9:g.24221298_24221302del	NC_000014.9:g.24221299_24221302del	NC_000014.9:g.24221300_24221302del	NC_000014.9:g.24221301_24221302del	NC_000014.9:g.24221302del	NC_000014.9:g.24221302dup	NC_000014.9:g.24221301_24221302dup	NC_000014.9:g.24221299_24221302dup
NEDD8-MDP1 RefSeqGene	NG_051059.1:g.16084_16098=	NG_051059.1:g.16092_16098del	NG_051059.1:g.16093_16098del	NG_051059.1:g.16094_16098del	NG_051059.1:g.16095_16098del	NG_051059.1:g.16096_16098del	NG_051059.1:g.16097_16098del	NG_051059.1:g.16098del	NG_051059.1:g.16098dup	NG_051059.1:g.16097_16098dup	NG_051059.1:g.16095_16098dup
GRCh38.p14 chr 14 fix patch HG1_PATCH	NW_018654722.1:g.522266_522280=	NW_018654722.1:g.522274_522280del	NW_018654722.1:g.522275_522280del	NW_018654722.1:g.522276_522280del	NW_018654722.1:g.522277_522280del	NW_018654722.1:g.522278_522280del	NW_018654722.1:g.522279_522280del	NW_018654722.1:g.522280del	NW_018654722.1:g.522280dup	NW_018654722.1:g.522279_522280dup	NW_018654722.1:g.522277_522280dup
GRCh37.p13 chr 14	NC_000014.8:g.24690494_24690508=	NC_000014.8:g.24690502_24690508del	NC_000014.8:g.24690503_24690508del	NC_000014.8:g.24690504_24690508del	NC_000014.8:g.24690505_24690508del	NC_000014.8:g.24690506_24690508del	NC_000014.8:g.24690507_24690508del	NC_000014.8:g.24690508del	NC_000014.8:g.24690508dup	NC_000014.8:g.24690507_24690508dup	NC_000014.8:g.24690505_24690508dup
NEDD8-MDP1 transcript	NM_001199823.1:c.19-2857=	NM_001199823.1:c.19-2863_19-2857del	NM_001199823.1:c.19-2862_19-2857del	NM_001199823.1:c.19-2861_19-2857del	NM_001199823.1:c.19-2860_19-2857del	NM_001199823.1:c.19-2859_19-2857del	NM_001199823.1:c.19-2858_19-2857del	NM_001199823.1:c.19-2857del	NM_001199823.1:c.19-2857dup	NM_001199823.1:c.19-2858_19-2857dup	NM_001199823.1:c.19-2860_19-2857dup
NEDD8-MDP1 transcript variant 1	NM_001199823.3:c.19-2857=	NM_001199823.3:c.19-2863_19-2857del	NM_001199823.3:c.19-2862_19-2857del	NM_001199823.3:c.19-2861_19-2857del	NM_001199823.3:c.19-2860_19-2857del	NM_001199823.3:c.19-2859_19-2857del	NM_001199823.3:c.19-2858_19-2857del	NM_001199823.3:c.19-2857del	NM_001199823.3:c.19-2857dup	NM_001199823.3:c.19-2858_19-2857dup	NM_001199823.3:c.19-2860_19-2857dup
NEDD8 transcript	NM_006156.2:c.19-2857=	NM_006156.2:c.19-2863_19-2857del	NM_006156.2:c.19-2862_19-2857del	NM_006156.2:c.19-2861_19-2857del	NM_006156.2:c.19-2860_19-2857del	NM_006156.2:c.19-2859_19-2857del	NM_006156.2:c.19-2858_19-2857del	NM_006156.2:c.19-2857del	NM_006156.2:c.19-2857dup	NM_006156.2:c.19-2858_19-2857dup	NM_006156.2:c.19-2860_19-2857dup
NEDD8 transcript	NM_006156.3:c.19-2857=	NM_006156.3:c.19-2863_19-2857del	NM_006156.3:c.19-2862_19-2857del	NM_006156.3:c.19-2861_19-2857del	NM_006156.3:c.19-2860_19-2857del	NM_006156.3:c.19-2859_19-2857del	NM_006156.3:c.19-2858_19-2857del	NM_006156.3:c.19-2857del	NM_006156.3:c.19-2857dup	NM_006156.3:c.19-2858_19-2857dup	NM_006156.3:c.19-2860_19-2857dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

34 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss40467251	Mar 14, 2006 (126)
2	GMI	ss289209014	May 04, 2012 (137)
3	SSIP	ss947324890	Aug 21, 2014 (142)
4	1000GENOMES	ss1373827859	Aug 21, 2014 (142)
5	EVA_GENOME_DK	ss1574725980	Apr 01, 2015 (144)
6	SWEGEN	ss3011877950	Nov 08, 2017 (151)
7	MCHAISSO	ss3065546681	Nov 08, 2017 (151)
8	ACPOP	ss3740205543	Jul 13, 2019 (153)
9	ACPOP	ss3740205544	Jul 13, 2019 (153)
10	PACBIO	ss3787610388	Jul 13, 2019 (153)
11	KHV_HUMAN_GENOMES	ss3817415232	Jul 13, 2019 (153)
12	EVA	ss3833815401	Apr 27, 2020 (154)
13	KOGIC	ss3974545077	Apr 27, 2020 (154)
14	KOGIC	ss3974545078	Apr 27, 2020 (154)
15	KOGIC	ss3974545079	Apr 27, 2020 (154)
16	GNOMAD	ss4274601467	Apr 26, 2021 (155)
17	GNOMAD	ss4274601468	Apr 26, 2021 (155)
18	GNOMAD	ss4274601469	Apr 26, 2021 (155)
19	GNOMAD	ss4274601470	Apr 26, 2021 (155)
20	GNOMAD	ss4274601471	Apr 26, 2021 (155)
21	GNOMAD	ss4274601472	Apr 26, 2021 (155)
22	GNOMAD	ss4274601473	Apr 26, 2021 (155)
23	GNOMAD	ss4274601474	Apr 26, 2021 (155)
24	TOPMED	ss4963762368	Apr 26, 2021 (155)
25	TOMMO_GENOMICS	ss5212341597	Apr 26, 2021 (155)
26	TOMMO_GENOMICS	ss5212341598	Apr 26, 2021 (155)
27	1000G_HIGH_COVERAGE	ss5295526789	Oct 16, 2022 (156)
28	1000G_HIGH_COVERAGE	ss5295526790	Oct 16, 2022 (156)
29	1000G_HIGH_COVERAGE	ss5295526791	Oct 16, 2022 (156)
30	HUGCELL_USP	ss5489653508	Oct 16, 2022 (156)
31	HUGCELL_USP	ss5489653509	Oct 16, 2022 (156)
32	HUGCELL_USP	ss5489653510	Oct 16, 2022 (156)
33	TOMMO_GENOMICS	ss5764889369	Oct 16, 2022 (156)
34	TOMMO_GENOMICS	ss5764889370	Oct 16, 2022 (156)
35	1000Genomes	NC_000014.8 - 24690494	Oct 12, 2018 (152)
36	The Danish reference pan genome	NC_000014.8 - 24690494	Apr 27, 2020 (154)
37	gnomAD - Genomes Submission ignored due to conflicting rows: Row 445416689 (NC_000014.9:24221287::T 5392/128804) Row 445416690 (NC_000014.9:24221287::TT 86/128850) Row 445416691 (NC_000014.9:24221287::TTTT 1/128850)...	-	Apr 26, 2021 (155)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 445416689 (NC_000014.9:24221287::T 5392/128804) Row 445416690 (NC_000014.9:24221287::TT 86/128850) Row 445416691 (NC_000014.9:24221287::TTTT 1/128850)...	-	Apr 26, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 445416689 (NC_000014.9:24221287::T 5392/128804) Row 445416690 (NC_000014.9:24221287::TT 86/128850) Row 445416691 (NC_000014.9:24221287::TTTT 1/128850)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 445416689 (NC_000014.9:24221287::T 5392/128804) Row 445416690 (NC_000014.9:24221287::TT 86/128850) Row 445416691 (NC_000014.9:24221287::TTTT 1/128850)...	-	Apr 26, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 445416689 (NC_000014.9:24221287::T 5392/128804) Row 445416690 (NC_000014.9:24221287::TT 86/128850) Row 445416691 (NC_000014.9:24221287::TTTT 1/128850)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 445416689 (NC_000014.9:24221287::T 5392/128804) Row 445416690 (NC_000014.9:24221287::TT 86/128850) Row 445416691 (NC_000014.9:24221287::TTTT 1/128850)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 445416689 (NC_000014.9:24221287::T 5392/128804) Row 445416690 (NC_000014.9:24221287::TT 86/128850) Row 445416691 (NC_000014.9:24221287::TTTT 1/128850)...	-	Apr 26, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 445416689 (NC_000014.9:24221287::T 5392/128804) Row 445416690 (NC_000014.9:24221287::TT 86/128850) Row 445416691 (NC_000014.9:24221287::TTTT 1/128850)...	-	Apr 26, 2021 (155)
45	Korean Genome Project Submission ignored due to conflicting rows: Row 30923078 (NC_000014.9:24221288::T 402/1832) Row 30923079 (NC_000014.9:24221288::TT 45/1832) Row 30923080 (NC_000014.9:24221287:T: 56/1832)	-	Apr 27, 2020 (154)
46	Korean Genome Project Submission ignored due to conflicting rows: Row 30923078 (NC_000014.9:24221288::T 402/1832) Row 30923079 (NC_000014.9:24221288::TT 45/1832) Row 30923080 (NC_000014.9:24221287:T: 56/1832)	-	Apr 27, 2020 (154)
47	Korean Genome Project Submission ignored due to conflicting rows: Row 30923078 (NC_000014.9:24221288::T 402/1832) Row 30923079 (NC_000014.9:24221288::TT 45/1832) Row 30923080 (NC_000014.9:24221287:T: 56/1832)	-	Apr 27, 2020 (154)
48	Northern Sweden Submission ignored due to conflicting rows: Row 13490408 (NC_000014.8:24690493::T 9/600) Row 13490409 (NC_000014.8:24690493:T: 6/600)	-	Jul 13, 2019 (153)
49	Northern Sweden Submission ignored due to conflicting rows: Row 13490408 (NC_000014.8:24690493::T 9/600) Row 13490409 (NC_000014.8:24690493:T: 6/600)	-	Jul 13, 2019 (153)
50	8.3KJPN Submission ignored due to conflicting rows: Row 70310904 (NC_000014.8:24690493::T 3987/16738) Row 70310905 (NC_000014.8:24690493::TT 389/16738)	-	Apr 26, 2021 (155)
51	8.3KJPN Submission ignored due to conflicting rows: Row 70310904 (NC_000014.8:24690493::T 3987/16738) Row 70310905 (NC_000014.8:24690493::TT 389/16738)	-	Apr 26, 2021 (155)
52	14KJPN Submission ignored due to conflicting rows: Row 98726473 (NC_000014.9:24221287::T 6911/28258) Row 98726474 (NC_000014.9:24221287::TT 717/28258)	-	Oct 16, 2022 (156)
53	14KJPN Submission ignored due to conflicting rows: Row 98726473 (NC_000014.9:24221287::T 6911/28258) Row 98726474 (NC_000014.9:24221287::TT 717/28258)	-	Oct 16, 2022 (156)
54	TopMed	NC_000014.9 - 24221288	Apr 26, 2021 (155)
55	ALFA	NC_000014.9 - 24221288	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
179308027, ss4274601474, ss4963762368	NC_000014.9:24221287:TTTTTTT:	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTT	(self)
ss4274601473	NC_000014.9:24221287:TTTT:	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss4274601472	NC_000014.9:24221287:TTT:	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss4274601471	NC_000014.9:24221287:TT:	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
63164345, ss1373827859, ss3011877950, ss3740205544, ss3787610388, ss3833815401	NC_000014.8:24690493:T:	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3065546681, ss3817415232, ss3974545079, ss4274601470, ss5295526790, ss5489653508	NC_000014.9:24221287:T:	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss40467251	NT_026437.12:5690507:T:	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss289209014	NC_000014.7:23760348::T	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
437761, ss1574725980, ss3740205543, ss5212341597	NC_000014.8:24690493::T	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss947324890	NC_000014.8:24690494::T	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4274601467, ss5295526789, ss5489653509, ss5764889369	NC_000014.9:24221287::T	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3974545077	NC_000014.9:24221288::T	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss5212341598	NC_000014.8:24690493::TT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss4274601468, ss5295526791, ss5489653510, ss5764889370	NC_000014.9:24221287::TT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
11214335507	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3974545078	NC_000014.9:24221288::TT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss4274601469	NC_000014.9:24221287::TTTT	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3205999564	NC_000014.9:24221287:TTTTTT:	NC_000014.9:24221287:TTTTTTTTTTTTT… NC_000014.9:24221287:TTTTTTTTTTTTTTT:TTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35302229

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35302229