Name: rs35598512
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35598512

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr19:52508353-52508365 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(GA)₃ / delGAGA / delGA / dupGA…
del(GA)₃ / delGAGA / delGA / dupGA / dupGAGA
Variation Type: Indel Insertion and Deletion
Frequency: del(GA)₃=0.000011 (3/264690, TOPMED)
dupGA=0.08374 (1133/13530, ALFA)
delGAGA=0.0036 (12/3329, 1000G) (+ 3 more)
dupGA=0.4765 (873/1832, Korea1K)
dupGA=0.207 (207/998, GoNL)
dupGA=0.15 (6/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ZNF578 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	13530	AGAGAGAGAGAGA=0.91249	AGAGAGA=0.00000, AGAGAGAGA=0.00377, AGAGAGAGAGA=0.00000, AGAGAGAGAGAGAGA=0.08374, AGAGAGAGAGAGAGAGA=0.00000	0.854036	0.020852	0.125112	32
European	Sub	11214	AGAGAGAGAGAGA=0.89486	AGAGAGA=0.00000, AGAGAGAGA=0.00455, AGAGAGAGAGA=0.00000, AGAGAGAGAGAGAGA=0.10059, AGAGAGAGAGAGAGAGA=0.00000	0.824154	0.024838	0.151008	32
African	Sub	1682	AGAGAGAGAGAGA=1.0000	AGAGAGA=0.0000, AGAGAGAGA=0.0000, AGAGAGAGAGA=0.0000, AGAGAGAGAGAGAGA=0.0000, AGAGAGAGAGAGAGAGA=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	64	AGAGAGAGAGAGA=1.00	AGAGAGA=0.00, AGAGAGAGA=0.00, AGAGAGAGAGA=0.00, AGAGAGAGAGAGAGA=0.00, AGAGAGAGAGAGAGAGA=0.00	1.0	0.0	0.0	N/A
African American	Sub	1618	AGAGAGAGAGAGA=1.0000	AGAGAGA=0.0000, AGAGAGAGA=0.0000, AGAGAGAGAGA=0.0000, AGAGAGAGAGAGAGA=0.0000, AGAGAGAGAGAGAGAGA=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	44	AGAGAGAGAGAGA=1.00	AGAGAGA=0.00, AGAGAGAGA=0.00, AGAGAGAGAGA=0.00, AGAGAGAGAGAGAGA=0.00, AGAGAGAGAGAGAGAGA=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	32	AGAGAGAGAGAGA=1.00	AGAGAGA=0.00, AGAGAGAGA=0.00, AGAGAGAGAGA=0.00, AGAGAGAGAGAGAGA=0.00, AGAGAGAGAGAGAGAGA=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	12	AGAGAGAGAGAGA=1.00	AGAGAGA=0.00, AGAGAGAGA=0.00, AGAGAGAGAGA=0.00, AGAGAGAGAGAGAGA=0.00, AGAGAGAGAGAGAGAGA=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	70	AGAGAGAGAGAGA=1.00	AGAGAGA=0.00, AGAGAGAGA=0.00, AGAGAGAGAGA=0.00, AGAGAGAGAGAGAGA=0.00, AGAGAGAGAGAGAGAGA=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	194	AGAGAGAGAGAGA=1.000	AGAGAGA=0.000, AGAGAGAGA=0.000, AGAGAGAGAGA=0.000, AGAGAGAGAGAGAGA=0.000, AGAGAGAGAGAGAGAGA=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	54	AGAGAGAGAGAGA=1.00	AGAGAGA=0.00, AGAGAGAGA=0.00, AGAGAGAGAGA=0.00, AGAGAGAGAGAGAGA=0.00, AGAGAGAGAGAGAGAGA=0.00	1.0	0.0	0.0	N/A
Other	Sub	272	AGAGAGAGAGAGA=0.982	AGAGAGA=0.000, AGAGAGAGA=0.000, AGAGAGAGAGA=0.000, AGAGAGAGAGAGAGA=0.018, AGAGAGAGAGAGAGAGA=0.000	0.977941	0.014706	0.007353	32

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(AG)₆A=0.999989	del(GA)₃=0.000011
Allele Frequency Aggregator	Total	Global	13530	(AG)₆A=0.91249	del(GA)₃=0.00000, delGAGA=0.00377, delGA=0.00000, dupGA=0.08374, dupGAGA=0.00000
Allele Frequency Aggregator	European	Sub	11214	(AG)₆A=0.89486	del(GA)₃=0.00000, delGAGA=0.00455, delGA=0.00000, dupGA=0.10059, dupGAGA=0.00000
Allele Frequency Aggregator	African	Sub	1682	(AG)₆A=1.0000	del(GA)₃=0.0000, delGAGA=0.0000, delGA=0.0000, dupGA=0.0000, dupGAGA=0.0000
Allele Frequency Aggregator	Other	Sub	272	(AG)₆A=0.982	del(GA)₃=0.000, delGAGA=0.000, delGA=0.000, dupGA=0.018, dupGAGA=0.000
Allele Frequency Aggregator	Latin American 2	Sub	194	(AG)₆A=1.000	del(GA)₃=0.000, delGAGA=0.000, delGA=0.000, dupGA=0.000, dupGAGA=0.000
Allele Frequency Aggregator	Latin American 1	Sub	70	(AG)₆A=1.00	del(GA)₃=0.00, delGAGA=0.00, delGA=0.00, dupGA=0.00, dupGAGA=0.00
Allele Frequency Aggregator	South Asian	Sub	54	(AG)₆A=1.00	del(GA)₃=0.00, delGAGA=0.00, delGA=0.00, dupGA=0.00, dupGAGA=0.00
Allele Frequency Aggregator	Asian	Sub	44	(AG)₆A=1.00	del(GA)₃=0.00, delGAGA=0.00, delGA=0.00, dupGA=0.00, dupGAGA=0.00
1000Genomes	Global	Study-wide	3329	(AG)₆A=0.9964	delGAGA=0.0036
1000Genomes	African	Sub	985	(AG)₆A=1.000	delGAGA=0.000
1000Genomes	Europe	Sub	769	(AG)₆A=0.984	delGAGA=0.016
1000Genomes	South Asian	Sub	665	(AG)₆A=1.000	delGAGA=0.000
1000Genomes	East Asian	Sub	488	(AG)₆A=1.000	delGAGA=0.000
1000Genomes	American	Sub	422	(AG)₆A=1.000	delGAGA=0.000
Korean Genome Project	KOREAN	Study-wide	1832	- No frequency provided	dupGA=0.4765
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	- No frequency provided	dupGA=0.207
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupGA=0.15

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 19	NC_000019.10:g.52508354GA[3]
GRCh38.p14 chr 19	NC_000019.10:g.52508354GA[4]
GRCh38.p14 chr 19	NC_000019.10:g.52508354GA[5]
GRCh38.p14 chr 19	NC_000019.10:g.52508354GA[7]
GRCh38.p14 chr 19	NC_000019.10:g.52508354GA[8]
GRCh37.p13 chr 19	NC_000019.9:g.53011607GA[3]
GRCh37.p13 chr 19	NC_000019.9:g.53011607GA[4]
GRCh37.p13 chr 19	NC_000019.9:g.53011607GA[5]
GRCh37.p13 chr 19	NC_000019.9:g.53011607GA[7]
GRCh37.p13 chr 19	NC_000019.9:g.53011607GA[8]

Gene: ZNF578, zinc finger protein 578 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ZNF578 transcript variant 1	NM_001099694.2:c.191-2219… NM_001099694.2:c.191-2219AG[3]	N/A	Intron Variant
ZNF578 transcript variant 2	NM_001366182.2:c.191-2219… NM_001366182.2:c.191-2219AG[3]	N/A	Intron Variant
ZNF578 transcript variant X1	XM_047438189.1:c.191-2219… XM_047438189.1:c.191-2219AG[3]	N/A	Intron Variant
ZNF578 transcript variant X2	XM_047438190.1:c.191-2219… XM_047438190.1:c.191-2219AG[3]	N/A	Intron Variant
ZNF578 transcript variant X3	XM_047438191.1:c.191-2219… XM_047438191.1:c.191-2219AG[3]	N/A	Intron Variant
ZNF578 transcript variant X4	XM_047438192.1:c.191-2219… XM_047438192.1:c.191-2219AG[3]	N/A	Intron Variant
ZNF578 transcript variant X5	XM_047438193.1:c.191-2219… XM_047438193.1:c.191-2219AG[3]	N/A	Intron Variant
ZNF578 transcript variant X6	XM_047438194.1:c.-17-2219… XM_047438194.1:c.-17-2219AG[3]	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(AG)₆A=	del(GA)₃	delGAGA	delGA	dupGA	dupGAGA
GRCh38.p14 chr 19	NC_000019.10:g.52508353_52508365=	NC_000019.10:g.52508354GA[3]	NC_000019.10:g.52508354GA[4]	NC_000019.10:g.52508354GA[5]	NC_000019.10:g.52508354GA[7]	NC_000019.10:g.52508354GA[8]
GRCh37.p13 chr 19	NC_000019.9:g.53011606_53011618=	NC_000019.9:g.53011607GA[3]	NC_000019.9:g.53011607GA[4]	NC_000019.9:g.53011607GA[5]	NC_000019.9:g.53011607GA[7]	NC_000019.9:g.53011607GA[8]
ZNF578 transcript variant 1	NM_001099694.1:c.191-2219=	NM_001099694.1:c.191-2219AG[3]	NM_001099694.1:c.191-2219AG[4]	NM_001099694.1:c.191-2219AG[5]	NM_001099694.1:c.191-2219AG[7]	NM_001099694.1:c.191-2219AG[8]
ZNF578 transcript variant 1	NM_001099694.2:c.191-2219=	NM_001099694.2:c.191-2219AG[3]	NM_001099694.2:c.191-2219AG[4]	NM_001099694.2:c.191-2219AG[5]	NM_001099694.2:c.191-2219AG[7]	NM_001099694.2:c.191-2219AG[8]
ZNF578 transcript variant 2	NM_001366182.2:c.191-2219=	NM_001366182.2:c.191-2219AG[3]	NM_001366182.2:c.191-2219AG[4]	NM_001366182.2:c.191-2219AG[5]	NM_001366182.2:c.191-2219AG[7]	NM_001366182.2:c.191-2219AG[8]
ZNF578 transcript variant X1	XM_005258527.1:c.191-2219=	XM_005258527.1:c.191-2219AG[3]	XM_005258527.1:c.191-2219AG[4]	XM_005258527.1:c.191-2219AG[5]	XM_005258527.1:c.191-2219AG[7]	XM_005258527.1:c.191-2219AG[8]
ZNF578 transcript variant X1	XM_047438189.1:c.191-2219=	XM_047438189.1:c.191-2219AG[3]	XM_047438189.1:c.191-2219AG[4]	XM_047438189.1:c.191-2219AG[5]	XM_047438189.1:c.191-2219AG[7]	XM_047438189.1:c.191-2219AG[8]
ZNF578 transcript variant X2	XM_047438190.1:c.191-2219=	XM_047438190.1:c.191-2219AG[3]	XM_047438190.1:c.191-2219AG[4]	XM_047438190.1:c.191-2219AG[5]	XM_047438190.1:c.191-2219AG[7]	XM_047438190.1:c.191-2219AG[8]
ZNF578 transcript variant X3	XM_047438191.1:c.191-2219=	XM_047438191.1:c.191-2219AG[3]	XM_047438191.1:c.191-2219AG[4]	XM_047438191.1:c.191-2219AG[5]	XM_047438191.1:c.191-2219AG[7]	XM_047438191.1:c.191-2219AG[8]
ZNF578 transcript variant X4	XM_047438192.1:c.191-2219=	XM_047438192.1:c.191-2219AG[3]	XM_047438192.1:c.191-2219AG[4]	XM_047438192.1:c.191-2219AG[5]	XM_047438192.1:c.191-2219AG[7]	XM_047438192.1:c.191-2219AG[8]
ZNF578 transcript variant X5	XM_047438193.1:c.191-2219=	XM_047438193.1:c.191-2219AG[3]	XM_047438193.1:c.191-2219AG[4]	XM_047438193.1:c.191-2219AG[5]	XM_047438193.1:c.191-2219AG[7]	XM_047438193.1:c.191-2219AG[8]
ZNF578 transcript variant X6	XM_047438194.1:c.-17-2219=	XM_047438194.1:c.-17-2219AG[3]	XM_047438194.1:c.-17-2219AG[4]	XM_047438194.1:c.-17-2219AG[5]	XM_047438194.1:c.-17-2219AG[7]	XM_047438194.1:c.-17-2219AG[8]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

54 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss41006675	Mar 15, 2006 (126)
2	HUMANGENOME_JCVI	ss95975965	Dec 05, 2013 (138)
3	GMI	ss289393841	May 04, 2012 (137)
4	1000GENOMES	ss327914720	May 09, 2011 (135)
5	1000GENOMES	ss328039810	May 09, 2011 (135)
6	1000GENOMES	ss328281483	May 09, 2011 (135)
7	LUNTER	ss552634807	Apr 25, 2013 (138)
8	LUNTER	ss553024633	Apr 25, 2013 (138)
9	LUNTER	ss553667537	Apr 25, 2013 (138)
10	TISHKOFF	ss565774257	Apr 25, 2013 (138)
11	SSMP	ss664451767	Apr 01, 2015 (144)
12	EVA-GONL	ss994400093	Aug 21, 2014 (142)
13	1000GENOMES	ss1378248575	Aug 21, 2014 (142)
14	1000GENOMES	ss1378248578	Oct 12, 2018 (152)
15	DDI	ss1536896714	Apr 01, 2015 (144)
16	EVA_GENOME_DK	ss1575310444	Apr 01, 2015 (144)
17	EVA_UK10K_ALSPAC	ss1709243632	Apr 01, 2015 (144)
18	EVA_UK10K_TWINSUK	ss1709243788	Apr 01, 2015 (144)
19	EVA_UK10K_TWINSUK	ss1710798163	Oct 12, 2018 (152)
20	EVA_UK10K_ALSPAC	ss1710798164	Oct 12, 2018 (152)
21	GENOMED	ss1968661084	Jul 19, 2016 (147)
22	JJLAB	ss2031412857	Sep 14, 2016 (149)
23	SYSTEMSBIOZJU	ss2629360043	Nov 08, 2017 (151)
24	SWEGEN	ss3017645867	Nov 08, 2017 (151)
25	MCHAISSO	ss3063920364	Nov 08, 2017 (151)
26	MCHAISSO	ss3064769344	Nov 08, 2017 (151)
27	BIOINF_KMB_FNS_UNIBA	ss3645526523	Oct 12, 2018 (152)
28	URBANLAB	ss3650938327	Oct 12, 2018 (152)
29	EVA_DECODE	ss3702969170	Jul 13, 2019 (153)
30	EVA_DECODE	ss3702969171	Jul 13, 2019 (153)
31	ACPOP	ss3743127074	Jul 13, 2019 (153)
32	ACPOP	ss3743127075	Jul 13, 2019 (153)
33	KHV_HUMAN_GENOMES	ss3821432477	Jul 13, 2019 (153)
34	KHV_HUMAN_GENOMES	ss3821432478	Jul 13, 2019 (153)
35	EVA	ss3835514467	Apr 27, 2020 (154)
36	KOGIC	ss3981580038	Apr 27, 2020 (154)
37	GNOMAD	ss4332949771	Apr 27, 2021 (155)
38	GNOMAD	ss4332949772	Apr 27, 2021 (155)
39	GNOMAD	ss4332949773	Apr 27, 2021 (155)
40	GNOMAD	ss4332949774	Apr 27, 2021 (155)
41	GNOMAD	ss4332949775	Apr 27, 2021 (155)
42	TOPMED	ss5078099624	Apr 27, 2021 (155)
43	TOMMO_GENOMICS	ss5228244626	Apr 27, 2021 (155)
44	TOMMO_GENOMICS	ss5228244627	Apr 27, 2021 (155)
45	1000G_HIGH_COVERAGE	ss5307618736	Oct 13, 2022 (156)
46	1000G_HIGH_COVERAGE	ss5307618737	Oct 13, 2022 (156)
47	HUGCELL_USP	ss5500081393	Oct 13, 2022 (156)
48	HUGCELL_USP	ss5500081394	Oct 13, 2022 (156)
49	TOMMO_GENOMICS	ss5787042198	Oct 13, 2022 (156)
50	TOMMO_GENOMICS	ss5787042199	Oct 13, 2022 (156)
51	YY_MCH	ss5817690597	Oct 13, 2022 (156)
52	EVA	ss5840691621	Oct 13, 2022 (156)
53	EVA	ss5840691622	Oct 13, 2022 (156)
54	EVA	ss5852328187	Oct 13, 2022 (156)
55	1000Genomes	NC_000019.9 - 53011606	Oct 12, 2018 (152)
56	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 42618694 (NC_000019.9:53011605::AG 734/3854) Row 42618695 (NC_000019.9:53011605:AGAG: 2/3854)	-	Oct 12, 2018 (152)
57	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 42618694 (NC_000019.9:53011605::AG 734/3854) Row 42618695 (NC_000019.9:53011605:AGAG: 2/3854)	-	Oct 12, 2018 (152)
58	The Danish reference pan genome	NC_000019.9 - 53011606	Apr 27, 2020 (154)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542900915 (NC_000019.10:52508352::AG 35057/137714) Row 542900916 (NC_000019.10:52508352::AGAG 4/137814) Row 542900917 (NC_000019.10:52508352:AG: 6/137810)...	-	Apr 27, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542900915 (NC_000019.10:52508352::AG 35057/137714) Row 542900916 (NC_000019.10:52508352::AGAG 4/137814) Row 542900917 (NC_000019.10:52508352:AG: 6/137810)...	-	Apr 27, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542900915 (NC_000019.10:52508352::AG 35057/137714) Row 542900916 (NC_000019.10:52508352::AGAG 4/137814) Row 542900917 (NC_000019.10:52508352:AG: 6/137810)...	-	Apr 27, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542900915 (NC_000019.10:52508352::AG 35057/137714) Row 542900916 (NC_000019.10:52508352::AGAG 4/137814) Row 542900917 (NC_000019.10:52508352:AG: 6/137810)...	-	Apr 27, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 542900915 (NC_000019.10:52508352::AG 35057/137714) Row 542900916 (NC_000019.10:52508352::AGAG 4/137814) Row 542900917 (NC_000019.10:52508352:AG: 6/137810)...	-	Apr 27, 2021 (155)
64	Genome of the Netherlands Release 5	NC_000019.9 - 53011606	Apr 27, 2020 (154)
65	Korean Genome Project	NC_000019.10 - 52508353	Apr 27, 2020 (154)
66	Northern Sweden Submission ignored due to conflicting rows: Row 16411939 (NC_000019.9:53011605::AG 125/600) Row 16411940 (NC_000019.9:53011605:AGAG: 3/600)	-	Jul 13, 2019 (153)
67	Northern Sweden Submission ignored due to conflicting rows: Row 16411939 (NC_000019.9:53011605::AG 125/600) Row 16411940 (NC_000019.9:53011605:AGAG: 3/600)	-	Jul 13, 2019 (153)
68	8.3KJPN Submission ignored due to conflicting rows: Row 86213933 (NC_000019.9:53011605::AG 8369/16760) Row 86213934 (NC_000019.9:53011605:AGAG: 1/16760)	-	Apr 27, 2021 (155)
69	8.3KJPN Submission ignored due to conflicting rows: Row 86213933 (NC_000019.9:53011605::AG 8369/16760) Row 86213934 (NC_000019.9:53011605:AGAG: 1/16760)	-	Apr 27, 2021 (155)
70	14KJPN Submission ignored due to conflicting rows: Row 120879302 (NC_000019.10:52508352::AG 14015/28258) Row 120879303 (NC_000019.10:52508352:AGAG: 1/28258)	-	Oct 13, 2022 (156)
71	14KJPN Submission ignored due to conflicting rows: Row 120879302 (NC_000019.10:52508352::AG 14015/28258) Row 120879303 (NC_000019.10:52508352:AGAG: 1/28258)	-	Oct 13, 2022 (156)
72	TopMed	NC_000019.10 - 52508353	Apr 27, 2021 (155)
73	UK 10K study - Twins Submission ignored due to conflicting rows: Row 42618694 (NC_000019.9:53011605::AG 743/3708) Row 42618695 (NC_000019.9:53011605:AGAG: 1/3708)	-	Oct 12, 2018 (152)
74	UK 10K study - Twins Submission ignored due to conflicting rows: Row 42618694 (NC_000019.9:53011605::AG 743/3708) Row 42618695 (NC_000019.9:53011605:AGAG: 1/3708)	-	Oct 12, 2018 (152)
75	ALFA	NC_000019.10 - 52508353	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs375647416	May 15, 2013 (138)
rs931059462	Nov 08, 2017 (151)
rs142058402	Sep 17, 2011 (135)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
293645288, ss4332949775, ss5078099624	NC_000019.10:52508352:AGAGAG:	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGA	(self)
13477867338	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGA	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGA	(self)
76981436, ss1378248575, ss1709243632, ss1709243788, ss3017645867, ss3743127075, ss5228244627, ss5840691622	NC_000019.9:53011605:AGAG:	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGA	(self)
ss3702969171, ss4332949774, ss5307618737, ss5500081394, ss5787042199	NC_000019.10:52508352:AGAG:	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGA	(self)
13477867338	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGA	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGA	(self)
ss4332949773	NC_000019.10:52508352:AG:	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGA	(self)
13477867338	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGA	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGA	(self)
ss327914720, ss328039810, ss328281483, ss552634807, ss553024633, ss553667537	NC_000019.8:57703417::AG	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
ss289393841	NC_000019.8:57703430::GA	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
640517, 18985914, ss664451767, ss994400093, ss1536896714, ss1575310444, ss1968661084, ss2031412857, ss2629360043, ss3743127074, ss3835514467, ss5228244626, ss5840691621	NC_000019.9:53011605::AG	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
ss1378248578, ss1710798163, ss1710798164	NC_000019.9:53011609::AG	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
ss565774257	NC_000019.9:53011618::GA	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
37958039, ss3063920364, ss3064769344, ss3645526523, ss3650938327, ss3821432477, ss3981580038, ss4332949771, ss5307618736, ss5500081393, ss5787042198, ss5817690597, ss5852328187	NC_000019.10:52508352::AG	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
13477867338	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
ss3702969170, ss3821432478	NC_000019.10:52508356::AG	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
ss41006675	NT_011109.16:25279823::AG	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
ss95975965	NT_011109.16:25279836::GA	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGA	(self)
ss4332949772	NC_000019.10:52508352::AGAG	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGAGA	(self)
13477867338	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGAGA	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGAGAGAGA	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss2392319602	NC_000019.9:53011605:AG:	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGAGAGA
ss2392319603	NC_000019.9:53011605:AGAGAG:	NC_000019.10:52508352:AGAGAGAGAGAG… NC_000019.10:52508352:AGAGAGAGAGAGA:AGAGAGA

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35598512

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35598512