Name: rs369399517
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs369399517

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:99541663-99541679 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(TA)₃ / delTATA / delTA / dupTA…
del(TA)₃ / delTATA / delTA / dupTA / dupTATA / dup(TA)₃ / dup(TA)₄ / dup(TA)₅
Variation Type: Indel Insertion and Deletion
Frequency: dupTATA=0.07348 (783/10656, ALFA)
dupTATA=0.2153 (1078/5008, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC02113 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	10656	ATATATATATATATATA=0.90456	ATATATATATA=0.00000, ATATATATATATA=0.00000, ATATATATATATATA=0.00000, ATATATATATATATATATA=0.01492, ATATATATATATATATATATA=0.07348, ATATATATATATATATATATATA=0.00704, ATATATATATATATATATATATATA=0.00000, ATATATATATATATATATATATATATA=0.00000	0.868039	0.013922	0.118039	32
European	Sub	8386	ATATATATATATATATA=0.8790	ATATATATATA=0.0000, ATATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATATA=0.0188, ATATATATATATATATATATA=0.0933, ATATATATATATATATATATATA=0.0089, ATATATATATATATATATATATATA=0.0000, ATATATATATATATATATATATATATA=0.0000	0.83056	0.017902	0.151538	25
African	Sub	1524	ATATATATATATATATA=1.0000	ATATATATATA=0.0000, ATATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATATA=0.0000, ATATATATATATATATATATA=0.0000, ATATATATATATATATATATATA=0.0000, ATATATATATATATATATATATATA=0.0000, ATATATATATATATATATATATATATA=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	62	ATATATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATATA=0.00, ATATATATATATATATATATA=0.00, ATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
African American	Sub	1462	ATATATATATATATATA=1.0000	ATATATATATA=0.0000, ATATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATATA=0.0000, ATATATATATATATATATATA=0.0000, ATATATATATATATATATATATA=0.0000, ATATATATATATATATATATATATA=0.0000, ATATATATATATATATATATATATATA=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	38	ATATATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATATA=0.00, ATATATATATATATATATATA=0.00, ATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	32	ATATATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATATA=0.00, ATATATATATATATATATATA=0.00, ATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	6	ATATATATATATATATA=1.0	ATATATATATA=0.0, ATATATATATATA=0.0, ATATATATATATATA=0.0, ATATATATATATATATATA=0.0, ATATATATATATATATATATA=0.0, ATATATATATATATATATATATA=0.0, ATATATATATATATATATATATATA=0.0, ATATATATATATATATATATATATATA=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	80	ATATATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATATA=0.00, ATATATATATATATATATATA=0.00, ATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	310	ATATATATATATATATA=1.000	ATATATATATA=0.000, ATATATATATATA=0.000, ATATATATATATATA=0.000, ATATATATATATATATATA=0.000, ATATATATATATATATATATA=0.000, ATATATATATATATATATATATA=0.000, ATATATATATATATATATATATATA=0.000, ATATATATATATATATATATATATATA=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	52	ATATATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATATA=0.00, ATATATATATATATATATATA=0.00, ATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATA=0.00, ATATATATATATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
Other	Sub	266	ATATATATATATATATA=0.992	ATATATATATA=0.000, ATATATATATATA=0.000, ATATATATATATATA=0.000, ATATATATATATATATATA=0.004, ATATATATATATATATATATA=0.004, ATATATATATATATATATATATA=0.000, ATATATATATATATATATATATATA=0.000, ATATATATATATATATATATATATATA=0.000	0.992424	0.0	0.007576	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	10656	(AT)₈A=0.90456	del(TA)₃=0.00000, delTATA=0.00000, delTA=0.00000, dupTA=0.01492, dupTATA=0.07348, dup(TA)₃=0.00704, dup(TA)₄=0.00000, dup(TA)₅=0.00000
Allele Frequency Aggregator	European	Sub	8386	(AT)₈A=0.8790	del(TA)₃=0.0000, delTATA=0.0000, delTA=0.0000, dupTA=0.0188, dupTATA=0.0933, dup(TA)₃=0.0089, dup(TA)₄=0.0000, dup(TA)₅=0.0000
Allele Frequency Aggregator	African	Sub	1524	(AT)₈A=1.0000	del(TA)₃=0.0000, delTATA=0.0000, delTA=0.0000, dupTA=0.0000, dupTATA=0.0000, dup(TA)₃=0.0000, dup(TA)₄=0.0000, dup(TA)₅=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	310	(AT)₈A=1.000	del(TA)₃=0.000, delTATA=0.000, delTA=0.000, dupTA=0.000, dupTATA=0.000, dup(TA)₃=0.000, dup(TA)₄=0.000, dup(TA)₅=0.000
Allele Frequency Aggregator	Other	Sub	266	(AT)₈A=0.992	del(TA)₃=0.000, delTATA=0.000, delTA=0.000, dupTA=0.004, dupTATA=0.004, dup(TA)₃=0.000, dup(TA)₄=0.000, dup(TA)₅=0.000
Allele Frequency Aggregator	Latin American 1	Sub	80	(AT)₈A=1.00	del(TA)₃=0.00, delTATA=0.00, delTA=0.00, dupTA=0.00, dupTATA=0.00, dup(TA)₃=0.00, dup(TA)₄=0.00, dup(TA)₅=0.00
Allele Frequency Aggregator	South Asian	Sub	52	(AT)₈A=1.00	del(TA)₃=0.00, delTATA=0.00, delTA=0.00, dupTA=0.00, dupTATA=0.00, dup(TA)₃=0.00, dup(TA)₄=0.00, dup(TA)₅=0.00
Allele Frequency Aggregator	Asian	Sub	38	(AT)₈A=1.00	del(TA)₃=0.00, delTATA=0.00, delTA=0.00, dupTA=0.00, dupTATA=0.00, dup(TA)₃=0.00, dup(TA)₄=0.00, dup(TA)₅=0.00
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupTATA=0.2153
1000Genomes	African	Sub	1322	- No frequency provided	dupTATA=0.1770
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupTATA=0.2679
1000Genomes	Europe	Sub	1006	- No frequency provided	dupTATA=0.2127
1000Genomes	South Asian	Sub	978	- No frequency provided	dupTATA=0.227
1000Genomes	American	Sub	694	- No frequency provided	dupTATA=0.199

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.99541664TA[5]
GRCh38.p14 chr 5	NC_000005.10:g.99541664TA[6]
GRCh38.p14 chr 5	NC_000005.10:g.99541664TA[7]
GRCh38.p14 chr 5	NC_000005.10:g.99541664TA[9]
GRCh38.p14 chr 5	NC_000005.10:g.99541664TA[10]
GRCh38.p14 chr 5	NC_000005.10:g.99541664TA[11]
GRCh38.p14 chr 5	NC_000005.10:g.99541664TA[12]
GRCh38.p14 chr 5	NC_000005.10:g.99541664TA[13]
GRCh37.p13 chr 5	NC_000005.9:g.98877368TA[5]
GRCh37.p13 chr 5	NC_000005.9:g.98877368TA[6]
GRCh37.p13 chr 5	NC_000005.9:g.98877368TA[7]
GRCh37.p13 chr 5	NC_000005.9:g.98877368TA[9]
GRCh37.p13 chr 5	NC_000005.9:g.98877368TA[10]
GRCh37.p13 chr 5	NC_000005.9:g.98877368TA[11]
GRCh37.p13 chr 5	NC_000005.9:g.98877368TA[12]
GRCh37.p13 chr 5	NC_000005.9:g.98877368TA[13]

Gene: LINC02113, long intergenic non-protein coding RNA 2113 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC02113 transcript	NR_110562.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(AT)₈A=	del(TA)₃	delTATA	delTA	dupTA	dupTATA	dup(TA)₃	dup(TA)₄	dup(TA)₅
GRCh38.p14 chr 5	NC_000005.10:g.99541663_99541679=	NC_000005.10:g.99541664TA[5]	NC_000005.10:g.99541664TA[6]	NC_000005.10:g.99541664TA[7]	NC_000005.10:g.99541664TA[9]	NC_000005.10:g.99541664TA[10]	NC_000005.10:g.99541664TA[11]	NC_000005.10:g.99541664TA[12]	NC_000005.10:g.99541664TA[13]
GRCh37.p13 chr 5	NC_000005.9:g.98877367_98877383=	NC_000005.9:g.98877368TA[5]	NC_000005.9:g.98877368TA[6]	NC_000005.9:g.98877368TA[7]	NC_000005.9:g.98877368TA[9]	NC_000005.9:g.98877368TA[10]	NC_000005.9:g.98877368TA[11]	NC_000005.9:g.98877368TA[12]	NC_000005.9:g.98877368TA[13]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

47 SubSNP, 17 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GMI	ss288646799	Oct 12, 2018 (152)
2	LUNTER	ss551523537	Apr 25, 2013 (138)
3	LUNTER	ss553208754	Apr 25, 2013 (138)
4	SSMP	ss663633779	Apr 01, 2015 (144)
5	BILGI_BIOE	ss666320620	Apr 25, 2013 (138)
6	1000GENOMES	ss1374190392	Aug 21, 2014 (142)
7	DDI	ss1536472330	Apr 01, 2015 (144)
8	SWEGEN	ss2997408043	Nov 08, 2017 (151)
9	SWEGEN	ss2997408044	Nov 08, 2017 (151)
10	SWEGEN	ss2997408045	Nov 08, 2017 (151)
11	MCHAISSO	ss3065042486	Nov 08, 2017 (151)
12	MCHAISSO	ss3066031758	Nov 08, 2017 (151)
13	EVA_DECODE	ss3715239650	Jul 13, 2019 (153)
14	EVA_DECODE	ss3715239651	Jul 13, 2019 (153)
15	EVA_DECODE	ss3715239652	Jul 13, 2019 (153)
16	EVA_DECODE	ss3715239653	Jul 13, 2019 (153)
17	EVA_DECODE	ss3715239654	Jul 13, 2019 (153)
18	EVA_DECODE	ss3715239655	Jul 13, 2019 (153)
19	PACBIO	ss3785187404	Jul 13, 2019 (153)
20	PACBIO	ss3790580720	Jul 13, 2019 (153)
21	PACBIO	ss3795457386	Jul 13, 2019 (153)
22	KHV_HUMAN_GENOMES	ss3806941400	Jul 13, 2019 (153)
23	EVA	ss3829386043	Apr 26, 2020 (154)
24	EVA	ss3838167567	Apr 26, 2020 (154)
25	EVA	ss3843609233	Apr 26, 2020 (154)
26	GNOMAD	ss4109652424	Apr 26, 2021 (155)
27	GNOMAD	ss4109652425	Apr 26, 2021 (155)
28	GNOMAD	ss4109652426	Apr 26, 2021 (155)
29	GNOMAD	ss4109652427	Apr 26, 2021 (155)
30	GNOMAD	ss4109652428	Apr 26, 2021 (155)
31	GNOMAD	ss4109652431	Apr 26, 2021 (155)
32	GNOMAD	ss4109652432	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5173077134	Apr 26, 2021 (155)
34	TOMMO_GENOMICS	ss5173077135	Apr 26, 2021 (155)
35	TOMMO_GENOMICS	ss5173077136	Apr 26, 2021 (155)
36	TOMMO_GENOMICS	ss5173077137	Apr 26, 2021 (155)
37	1000G_HIGH_COVERAGE	ss5264996116	Oct 13, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5264996117	Oct 13, 2022 (156)
39	HUGCELL_USP	ss5463062430	Oct 13, 2022 (156)
40	HUGCELL_USP	ss5463062431	Oct 13, 2022 (156)
41	HUGCELL_USP	ss5463062432	Oct 13, 2022 (156)
42	TOMMO_GENOMICS	ss5709853829	Oct 13, 2022 (156)
43	TOMMO_GENOMICS	ss5709853830	Oct 13, 2022 (156)
44	TOMMO_GENOMICS	ss5709853831	Oct 13, 2022 (156)
45	TOMMO_GENOMICS	ss5709853832	Oct 13, 2022 (156)
46	EVA	ss5835319855	Oct 13, 2022 (156)
47	EVA	ss5835319856	Oct 13, 2022 (156)
48	1000Genomes	NC_000005.9 - 98877367	Oct 12, 2018 (152)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 197316503 (NC_000005.10:99541662::AT 8816/128116) Row 197316504 (NC_000005.10:99541662::ATAT 25486/127802) Row 197316505 (NC_000005.10:99541662::ATATAT 1214/128166)...	-	Apr 26, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 197316503 (NC_000005.10:99541662::AT 8816/128116) Row 197316504 (NC_000005.10:99541662::ATAT 25486/127802) Row 197316505 (NC_000005.10:99541662::ATATAT 1214/128166)...	-	Apr 26, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 197316503 (NC_000005.10:99541662::AT 8816/128116) Row 197316504 (NC_000005.10:99541662::ATAT 25486/127802) Row 197316505 (NC_000005.10:99541662::ATATAT 1214/128166)...	-	Apr 26, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 197316503 (NC_000005.10:99541662::AT 8816/128116) Row 197316504 (NC_000005.10:99541662::ATAT 25486/127802) Row 197316505 (NC_000005.10:99541662::ATATAT 1214/128166)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 197316503 (NC_000005.10:99541662::AT 8816/128116) Row 197316504 (NC_000005.10:99541662::ATAT 25486/127802) Row 197316505 (NC_000005.10:99541662::ATATAT 1214/128166)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 197316503 (NC_000005.10:99541662::AT 8816/128116) Row 197316504 (NC_000005.10:99541662::ATAT 25486/127802) Row 197316505 (NC_000005.10:99541662::ATATAT 1214/128166)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 197316503 (NC_000005.10:99541662::AT 8816/128116) Row 197316504 (NC_000005.10:99541662::ATAT 25486/127802) Row 197316505 (NC_000005.10:99541662::ATATAT 1214/128166)...	-	Apr 26, 2021 (155)
56	8.3KJPN Submission ignored due to conflicting rows: Row 31046441 (NC_000005.9:98877366::ATAT 5201/16760) Row 31046442 (NC_000005.9:98877366::AT 810/16760) Row 31046443 (NC_000005.9:98877366::ATATAT 433/16760)...	-	Apr 26, 2021 (155)
57	8.3KJPN Submission ignored due to conflicting rows: Row 31046441 (NC_000005.9:98877366::ATAT 5201/16760) Row 31046442 (NC_000005.9:98877366::AT 810/16760) Row 31046443 (NC_000005.9:98877366::ATATAT 433/16760)...	-	Apr 26, 2021 (155)
58	8.3KJPN Submission ignored due to conflicting rows: Row 31046441 (NC_000005.9:98877366::ATAT 5201/16760) Row 31046442 (NC_000005.9:98877366::AT 810/16760) Row 31046443 (NC_000005.9:98877366::ATATAT 433/16760)...	-	Apr 26, 2021 (155)
59	8.3KJPN Submission ignored due to conflicting rows: Row 31046441 (NC_000005.9:98877366::ATAT 5201/16760) Row 31046442 (NC_000005.9:98877366::AT 810/16760) Row 31046443 (NC_000005.9:98877366::ATATAT 433/16760)...	-	Apr 26, 2021 (155)
60	14KJPN Submission ignored due to conflicting rows: Row 43690933 (NC_000005.10:99541662::ATAT 8814/28256) Row 43690934 (NC_000005.10:99541662::ATATAT 730/28256) Row 43690935 (NC_000005.10:99541662::AT 1368/28256)...	-	Oct 13, 2022 (156)
61	14KJPN Submission ignored due to conflicting rows: Row 43690933 (NC_000005.10:99541662::ATAT 8814/28256) Row 43690934 (NC_000005.10:99541662::ATATAT 730/28256) Row 43690935 (NC_000005.10:99541662::AT 1368/28256)...	-	Oct 13, 2022 (156)
62	14KJPN Submission ignored due to conflicting rows: Row 43690933 (NC_000005.10:99541662::ATAT 8814/28256) Row 43690934 (NC_000005.10:99541662::ATATAT 730/28256) Row 43690935 (NC_000005.10:99541662::AT 1368/28256)...	-	Oct 13, 2022 (156)
63	14KJPN Submission ignored due to conflicting rows: Row 43690933 (NC_000005.10:99541662::ATAT 8814/28256) Row 43690934 (NC_000005.10:99541662::ATATAT 730/28256) Row 43690935 (NC_000005.10:99541662::AT 1368/28256)...	-	Oct 13, 2022 (156)
64	ALFA	NC_000005.10 - 99541663	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3715239655, ss4109652432	NC_000005.10:99541662:ATATAT:	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATA	(self)
966108609	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATA	(self)
966108609	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATA	(self)
ss3715239654	NC_000005.10:99541664:ATAT:	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATA	(self)
ss4109652431	NC_000005.10:99541662:AT:	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATA	(self)
966108609	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATA	(self)
ss3715239653	NC_000005.10:99541666:AT:	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATA	(self)
ss551523537	NC_000005.8:98905265::AT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATA	(self)
ss1536472330, ss2997408043, ss3785187404, ss3790580720, ss3795457386, ss3838167567, ss5173077135, ss5835319856	NC_000005.9:98877366::AT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATA	(self)
ss3843609233, ss4109652424, ss5264996116, ss5463062432, ss5709853831	NC_000005.10:99541662::AT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATA	(self)
966108609	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATA	(self)
ss3715239652	NC_000005.10:99541668::AT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATA	(self)
ss553208754	NC_000005.8:98905265::ATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATA	(self)
ss288646799	NC_000005.8:98905282::TATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATA	(self)
27895104, ss663633779, ss666320620, ss1374190392, ss2997408045, ss3829386043, ss5173077134, ss5835319855	NC_000005.9:98877366::ATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATA	(self)
ss3065042486, ss3066031758, ss3806941400, ss4109652425, ss5264996117, ss5463062431, ss5709853829	NC_000005.10:99541662::ATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATA	(self)
966108609	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATA	(self)
ss3715239651	NC_000005.10:99541668::ATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATA	(self)
ss2997408044, ss5173077136	NC_000005.9:98877366::ATATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATA	(self)
ss4109652426, ss5463062430, ss5709853830	NC_000005.10:99541662::ATATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATA	(self)
966108609	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATA	(self)
ss3715239650	NC_000005.10:99541668::ATATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATA	(self)
ss5173077137	NC_000005.9:98877366::ATATATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATATA	(self)
ss4109652427, ss5709853832	NC_000005.10:99541662::ATATATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATATA	(self)
966108609	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATATA	(self)
ss4109652428	NC_000005.10:99541662::ATATATATAT	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATATATA	(self)
966108609	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATATATA	NC_000005.10:99541662:ATATATATATAT… NC_000005.10:99541662:ATATATATATATATATA:ATATATATATATATATATATATATATA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs369399517

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs369399517