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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs371373270

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr5:115144038-115144047 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
delTTT / delTT / delT / dupT / dup…

delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)6

Variation Type
Indel Insertion and Deletion
Frequency
dupTT=0.2349 (1808/7698, ALFA)
(T)10=0.4397 (2202/5008, 1000G)
dupTT=0.4059 (1815/4472, Estonian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
TRIM36 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 7698 TTTTTTTTTT=0.7646 TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000, TTTTTTTTTTT=0.0005, TTTTTTTTTTTT=0.2349, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000 0.627308 0.096749 0.275943 32
European Sub 7124 TTTTTTTTTT=0.7462 TTTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000, TTTTTTTTTTT=0.0006, TTTTTTTTTTTT=0.2532, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000 0.59837 0.104553 0.297077 32
African Sub 264 TTTTTTTTTT=1.000 TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000 1.0 0.0 0.0 N/A
African Others Sub 10 TTTTTTTTTT=1.0 TTTTTTT=0.0, TTTTTTTT=0.0, TTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0 1.0 0.0 0.0 N/A
African American Sub 254 TTTTTTTTTT=1.000 TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000 1.0 0.0 0.0 N/A
Asian Sub 14 TTTTTTTTTT=1.00 TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00 1.0 0.0 0.0 N/A
East Asian Sub 10 TTTTTTTTTT=1.0 TTTTTTT=0.0, TTTTTTTT=0.0, TTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0 1.0 0.0 0.0 N/A
Other Asian Sub 4 TTTTTTTTTT=1.0 TTTTTTT=0.0, TTTTTTTT=0.0, TTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0 1.0 0.0 0.0 N/A
Latin American 1 Sub 38 TTTTTTTTTT=1.00 TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00 1.0 0.0 0.0 N/A
Latin American 2 Sub 110 TTTTTTTTTT=1.000 TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000 1.0 0.0 0.0 N/A
South Asian Sub 38 TTTTTTTTTT=1.00 TTTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00 1.0 0.0 0.0 N/A
Other Sub 110 TTTTTTTTTT=0.964 TTTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTT=0.036, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000 0.927273 0.0 0.072727 0


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 7698 (T)10=0.7646 delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0005, dupTT=0.2349, dupTTT=0.0000, dup(T)6=0.0000
Allele Frequency Aggregator European Sub 7124 (T)10=0.7462 delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0006, dupTT=0.2532, dupTTT=0.0000, dup(T)6=0.0000
Allele Frequency Aggregator African Sub 264 (T)10=1.000 delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)6=0.000
Allele Frequency Aggregator Latin American 2 Sub 110 (T)10=1.000 delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)6=0.000
Allele Frequency Aggregator Other Sub 110 (T)10=0.964 delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.036, dupTTT=0.000, dup(T)6=0.000
Allele Frequency Aggregator Latin American 1 Sub 38 (T)10=1.00 delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)6=0.00
Allele Frequency Aggregator South Asian Sub 38 (T)10=1.00 delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)6=0.00
Allele Frequency Aggregator Asian Sub 14 (T)10=1.00 delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)6=0.00
1000Genomes Global Study-wide 5008 -

No frequency provided

dupT=0.0523, dupTT=0.5080
1000Genomes African Sub 1322 -

No frequency provided

dupT=0.1884, dupTT=0.5106
1000Genomes East Asian Sub 1008 -

No frequency provided

dupT=0.0000, dupTT=0.7242
1000Genomes Europe Sub 1006 -

No frequency provided

dupT=0.0000, dupTT=0.3857
1000Genomes South Asian Sub 978 -

No frequency provided

dupT=0.004, dupTT=0.391
1000Genomes American Sub 694 -

No frequency provided

dupT=0.013, dupTT=0.532
Genetic variation in the Estonian population Estonian Study-wide 4472 -

No frequency provided

dupTT=0.4059
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 5 NC_000005.10:g.115144045_115144047del
GRCh38.p14 chr 5 NC_000005.10:g.115144046_115144047del
GRCh38.p14 chr 5 NC_000005.10:g.115144047del
GRCh38.p14 chr 5 NC_000005.10:g.115144047dup
GRCh38.p14 chr 5 NC_000005.10:g.115144046_115144047dup
GRCh38.p14 chr 5 NC_000005.10:g.115144045_115144047dup
GRCh38.p14 chr 5 NC_000005.10:g.115144042_115144047dup
GRCh37.p13 chr 5 NC_000005.9:g.114479742_114479744del
GRCh37.p13 chr 5 NC_000005.9:g.114479743_114479744del
GRCh37.p13 chr 5 NC_000005.9:g.114479744del
GRCh37.p13 chr 5 NC_000005.9:g.114479744dup
GRCh37.p13 chr 5 NC_000005.9:g.114479743_114479744dup
GRCh37.p13 chr 5 NC_000005.9:g.114479742_114479744dup
GRCh37.p13 chr 5 NC_000005.9:g.114479739_114479744dup
Gene: TRIM36, tripartite motif containing 36 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
TRIM36 transcript variant 4 NM_001300752.2:c.306+558_…

NM_001300752.2:c.306+558_306+560del

N/A Intron Variant
TRIM36 transcript variant 5 NM_001300759.2:c.735+558_…

NM_001300759.2:c.735+558_735+560del

N/A Intron Variant
TRIM36 transcript variant 1 NM_018700.4:c.771+558_771…

NM_018700.4:c.771+558_771+560del

N/A Intron Variant
TRIM36 transcript variant 2 NM_001017397.2:c. N/A Genic Downstream Transcript Variant
TRIM36 transcript variant 3 NM_001017398.2:c. N/A Genic Downstream Transcript Variant
TRIM36 transcript variant X1 XM_017009621.3:c.822+558_…

XM_017009621.3:c.822+558_822+560del

N/A Intron Variant
TRIM36 transcript variant X2 XM_017009622.3:c.786+558_…

XM_017009622.3:c.786+558_786+560del

N/A Intron Variant
TRIM36 transcript variant X5 XM_017009623.3:c.822+558_…

XM_017009623.3:c.822+558_822+560del

N/A Intron Variant
TRIM36 transcript variant X3 XM_047417360.1:c.504+558_…

XM_047417360.1:c.504+558_504+560del

N/A Intron Variant
TRIM36 transcript variant X4 XM_047417361.1:c.306+558_…

XM_047417361.1:c.306+558_306+560del

N/A Intron Variant
TRIM36 transcript variant X6 XM_047417362.1:c.822+558_…

XM_047417362.1:c.822+558_822+560del

N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (T)10= delTTT delTT delT dupT dupTT dupTTT dup(T)6
GRCh38.p14 chr 5 NC_000005.10:g.115144038_115144047= NC_000005.10:g.115144045_115144047del NC_000005.10:g.115144046_115144047del NC_000005.10:g.115144047del NC_000005.10:g.115144047dup NC_000005.10:g.115144046_115144047dup NC_000005.10:g.115144045_115144047dup NC_000005.10:g.115144042_115144047dup
GRCh37.p13 chr 5 NC_000005.9:g.114479735_114479744= NC_000005.9:g.114479742_114479744del NC_000005.9:g.114479743_114479744del NC_000005.9:g.114479744del NC_000005.9:g.114479744dup NC_000005.9:g.114479743_114479744dup NC_000005.9:g.114479742_114479744dup NC_000005.9:g.114479739_114479744dup
TRIM36 transcript variant 4 NM_001300752.2:c.306+560= NM_001300752.2:c.306+558_306+560del NM_001300752.2:c.306+559_306+560del NM_001300752.2:c.306+560del NM_001300752.2:c.306+560dup NM_001300752.2:c.306+559_306+560dup NM_001300752.2:c.306+558_306+560dup NM_001300752.2:c.306+555_306+560dup
TRIM36 transcript variant 5 NM_001300759.2:c.735+560= NM_001300759.2:c.735+558_735+560del NM_001300759.2:c.735+559_735+560del NM_001300759.2:c.735+560del NM_001300759.2:c.735+560dup NM_001300759.2:c.735+559_735+560dup NM_001300759.2:c.735+558_735+560dup NM_001300759.2:c.735+555_735+560dup
TRIM36 transcript variant 1 NM_018700.3:c.771+560= NM_018700.3:c.771+558_771+560del NM_018700.3:c.771+559_771+560del NM_018700.3:c.771+560del NM_018700.3:c.771+560dup NM_018700.3:c.771+559_771+560dup NM_018700.3:c.771+558_771+560dup NM_018700.3:c.771+555_771+560dup
TRIM36 transcript variant 1 NM_018700.4:c.771+560= NM_018700.4:c.771+558_771+560del NM_018700.4:c.771+559_771+560del NM_018700.4:c.771+560del NM_018700.4:c.771+560dup NM_018700.4:c.771+559_771+560dup NM_018700.4:c.771+558_771+560dup NM_018700.4:c.771+555_771+560dup
TRIM36 transcript variant X1 XM_005272031.1:c.735+560= XM_005272031.1:c.735+558_735+560del XM_005272031.1:c.735+559_735+560del XM_005272031.1:c.735+560del XM_005272031.1:c.735+560dup XM_005272031.1:c.735+559_735+560dup XM_005272031.1:c.735+558_735+560dup XM_005272031.1:c.735+555_735+560dup
TRIM36 transcript variant X2 XM_005272032.1:c.477+560= XM_005272032.1:c.477+558_477+560del XM_005272032.1:c.477+559_477+560del XM_005272032.1:c.477+560del XM_005272032.1:c.477+560dup XM_005272032.1:c.477+559_477+560dup XM_005272032.1:c.477+558_477+560dup XM_005272032.1:c.477+555_477+560dup
TRIM36 transcript variant X3 XM_005272033.1:c.306+560= XM_005272033.1:c.306+558_306+560del XM_005272033.1:c.306+559_306+560del XM_005272033.1:c.306+560del XM_005272033.1:c.306+560dup XM_005272033.1:c.306+559_306+560dup XM_005272033.1:c.306+558_306+560dup XM_005272033.1:c.306+555_306+560dup
TRIM36 transcript variant X4 XM_005272034.1:c.771+560= XM_005272034.1:c.771+558_771+560del XM_005272034.1:c.771+559_771+560del XM_005272034.1:c.771+560del XM_005272034.1:c.771+560dup XM_005272034.1:c.771+559_771+560dup XM_005272034.1:c.771+558_771+560dup XM_005272034.1:c.771+555_771+560dup
TRIM36 transcript variant X1 XM_017009621.3:c.822+560= XM_017009621.3:c.822+558_822+560del XM_017009621.3:c.822+559_822+560del XM_017009621.3:c.822+560del XM_017009621.3:c.822+560dup XM_017009621.3:c.822+559_822+560dup XM_017009621.3:c.822+558_822+560dup XM_017009621.3:c.822+555_822+560dup
TRIM36 transcript variant X2 XM_017009622.3:c.786+560= XM_017009622.3:c.786+558_786+560del XM_017009622.3:c.786+559_786+560del XM_017009622.3:c.786+560del XM_017009622.3:c.786+560dup XM_017009622.3:c.786+559_786+560dup XM_017009622.3:c.786+558_786+560dup XM_017009622.3:c.786+555_786+560dup
TRIM36 transcript variant X5 XM_017009623.3:c.822+560= XM_017009623.3:c.822+558_822+560del XM_017009623.3:c.822+559_822+560del XM_017009623.3:c.822+560del XM_017009623.3:c.822+560dup XM_017009623.3:c.822+559_822+560dup XM_017009623.3:c.822+558_822+560dup XM_017009623.3:c.822+555_822+560dup
TRIM36 transcript variant X3 XM_047417360.1:c.504+560= XM_047417360.1:c.504+558_504+560del XM_047417360.1:c.504+559_504+560del XM_047417360.1:c.504+560del XM_047417360.1:c.504+560dup XM_047417360.1:c.504+559_504+560dup XM_047417360.1:c.504+558_504+560dup XM_047417360.1:c.504+555_504+560dup
TRIM36 transcript variant X4 XM_047417361.1:c.306+560= XM_047417361.1:c.306+558_306+560del XM_047417361.1:c.306+559_306+560del XM_047417361.1:c.306+560del XM_047417361.1:c.306+560dup XM_047417361.1:c.306+559_306+560dup XM_047417361.1:c.306+558_306+560dup XM_047417361.1:c.306+555_306+560dup
TRIM36 transcript variant X6 XM_047417362.1:c.822+560= XM_047417362.1:c.822+558_822+560del XM_047417362.1:c.822+559_822+560del XM_047417362.1:c.822+560del XM_047417362.1:c.822+560dup XM_047417362.1:c.822+559_822+560dup XM_047417362.1:c.822+558_822+560dup XM_047417362.1:c.822+555_822+560dup
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

50 SubSNP, 21 Frequency submissions
No Submitter Submission ID Date (Build)
1 LUNTER ss551534058 Apr 25, 2013 (138)
2 LUNTER ss551699733 Apr 25, 2013 (138)
3 LUNTER ss553212985 Apr 25, 2013 (138)
4 SSMP ss663551218 Apr 01, 2015 (144)
5 1000GENOMES ss1374339651 Aug 21, 2014 (142)
6 1000GENOMES ss1374339654 Aug 21, 2014 (142)
7 DDI ss1536475994 Apr 01, 2015 (144)
8 EVA_UK10K_TWINSUK ss1704827216 Apr 01, 2015 (144)
9 EVA_UK10K_TWINSUK ss1704827218 Apr 01, 2015 (144)
10 EVA_UK10K_ALSPAC ss1704827223 Apr 01, 2015 (144)
11 EVA_UK10K_ALSPAC ss1704827225 Apr 01, 2015 (144)
12 JJLAB ss2030707889 Sep 14, 2016 (149)
13 SYSTEMSBIOZJU ss2626106392 Nov 08, 2017 (151)
14 SWEGEN ss2997597816 Nov 08, 2017 (151)
15 SWEGEN ss2997597817 Nov 08, 2017 (151)
16 MCHAISSO ss3065047056 Nov 08, 2017 (151)
17 MCHAISSO ss3066037065 Nov 08, 2017 (151)
18 BIOINF_KMB_FNS_UNIBA ss3645901103 Oct 12, 2018 (152)
19 EGCUT_WGS ss3665500010 Jul 13, 2019 (153)
20 EVA_DECODE ss3715467152 Jul 13, 2019 (153)
21 EVA_DECODE ss3715467153 Jul 13, 2019 (153)
22 ACPOP ss3732711306 Jul 13, 2019 (153)
23 ACPOP ss3732711307 Jul 13, 2019 (153)
24 PACBIO ss3785217863 Jul 13, 2019 (153)
25 PACBIO ss3790606628 Jul 13, 2019 (153)
26 PACBIO ss3795483404 Jul 13, 2019 (153)
27 KHV_HUMAN_GENOMES ss3807085289 Jul 13, 2019 (153)
28 KHV_HUMAN_GENOMES ss3807085290 Jul 13, 2019 (153)
29 EVA ss3829444281 Apr 26, 2020 (154)
30 KOGIC ss3957430738 Apr 26, 2020 (154)
31 KOGIC ss3957430739 Apr 26, 2020 (154)
32 GNOMAD ss4127207504 Apr 26, 2021 (155)
33 GNOMAD ss4127207505 Apr 26, 2021 (155)
34 GNOMAD ss4127207506 Apr 26, 2021 (155)
35 GNOMAD ss4127207507 Apr 26, 2021 (155)
36 GNOMAD ss4127207508 Apr 26, 2021 (155)
37 TOMMO_GENOMICS ss5173599124 Apr 26, 2021 (155)
38 TOMMO_GENOMICS ss5173599125 Apr 26, 2021 (155)
39 1000G_HIGH_COVERAGE ss5265411895 Oct 13, 2022 (156)
40 1000G_HIGH_COVERAGE ss5265411896 Oct 13, 2022 (156)
41 1000G_HIGH_COVERAGE ss5265411897 Oct 13, 2022 (156)
42 HUGCELL_USP ss5463425848 Oct 13, 2022 (156)
43 HUGCELL_USP ss5463425849 Oct 13, 2022 (156)
44 HUGCELL_USP ss5463425850 Oct 13, 2022 (156)
45 TOMMO_GENOMICS ss5710521471 Oct 13, 2022 (156)
46 TOMMO_GENOMICS ss5710521473 Oct 13, 2022 (156)
47 TOMMO_GENOMICS ss5710521474 Oct 13, 2022 (156)
48 YY_MCH ss5806664852 Oct 13, 2022 (156)
49 EVA ss5835477818 Oct 13, 2022 (156)
50 EVA ss5854970615 Oct 13, 2022 (156)
51 1000Genomes NC_000005.9 - 114479735 Oct 12, 2018 (152)
52 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 15785929 (NC_000005.9:114479734::TT 1544/3854)
Row 15785930 (NC_000005.9:114479734::TTT 17/3854)

- Oct 12, 2018 (152)
53 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 15785929 (NC_000005.9:114479734::TT 1544/3854)
Row 15785930 (NC_000005.9:114479734::TTT 17/3854)

- Oct 12, 2018 (152)
54 Genetic variation in the Estonian population NC_000005.9 - 114479735 Oct 12, 2018 (152)
55 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 200805313 (NC_000005.10:115144037::T 7319/137808)
Row 200805314 (NC_000005.10:115144037::TT 62474/137706)
Row 200805315 (NC_000005.10:115144037::TTT 699/137902)...

- Apr 26, 2021 (155)
56 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 200805313 (NC_000005.10:115144037::T 7319/137808)
Row 200805314 (NC_000005.10:115144037::TT 62474/137706)
Row 200805315 (NC_000005.10:115144037::TTT 699/137902)...

- Apr 26, 2021 (155)
57 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 200805313 (NC_000005.10:115144037::T 7319/137808)
Row 200805314 (NC_000005.10:115144037::TT 62474/137706)
Row 200805315 (NC_000005.10:115144037::TTT 699/137902)...

- Apr 26, 2021 (155)
58 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 200805313 (NC_000005.10:115144037::T 7319/137808)
Row 200805314 (NC_000005.10:115144037::TT 62474/137706)
Row 200805315 (NC_000005.10:115144037::TTT 699/137902)...

- Apr 26, 2021 (155)
59 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 200805313 (NC_000005.10:115144037::T 7319/137808)
Row 200805314 (NC_000005.10:115144037::TT 62474/137706)
Row 200805315 (NC_000005.10:115144037::TTT 699/137902)...

- Apr 26, 2021 (155)
60 Korean Genome Project

Submission ignored due to conflicting rows:
Row 13808739 (NC_000005.10:115144037::TT 1208/1832)
Row 13808740 (NC_000005.10:115144037::TTT 13/1832)

- Apr 26, 2020 (154)
61 Korean Genome Project

Submission ignored due to conflicting rows:
Row 13808739 (NC_000005.10:115144037::TT 1208/1832)
Row 13808740 (NC_000005.10:115144037::TTT 13/1832)

- Apr 26, 2020 (154)
62 Northern Sweden

Submission ignored due to conflicting rows:
Row 5996171 (NC_000005.9:114479734::TT 280/600)
Row 5996172 (NC_000005.9:114479734::T 1/600)

- Jul 13, 2019 (153)
63 Northern Sweden

Submission ignored due to conflicting rows:
Row 5996171 (NC_000005.9:114479734::TT 280/600)
Row 5996172 (NC_000005.9:114479734::T 1/600)

- Jul 13, 2019 (153)
64 8.3KJPN

Submission ignored due to conflicting rows:
Row 31568431 (NC_000005.9:114479734::TT 11496/16760)
Row 31568432 (NC_000005.9:114479734::TTT 14/16760)

- Apr 26, 2021 (155)
65 8.3KJPN

Submission ignored due to conflicting rows:
Row 31568431 (NC_000005.9:114479734::TT 11496/16760)
Row 31568432 (NC_000005.9:114479734::TTT 14/16760)

- Apr 26, 2021 (155)
66 14KJPN

Submission ignored due to conflicting rows:
Row 44358575 (NC_000005.10:115144037::TT 19402/28258)
Row 44358577 (NC_000005.10:115144037::TTT 23/28258)
Row 44358578 (NC_000005.10:115144037::T 12/28258)

- Oct 13, 2022 (156)
67 14KJPN

Submission ignored due to conflicting rows:
Row 44358575 (NC_000005.10:115144037::TT 19402/28258)
Row 44358577 (NC_000005.10:115144037::TTT 23/28258)
Row 44358578 (NC_000005.10:115144037::T 12/28258)

- Oct 13, 2022 (156)
68 14KJPN

Submission ignored due to conflicting rows:
Row 44358575 (NC_000005.10:115144037::TT 19402/28258)
Row 44358577 (NC_000005.10:115144037::TTT 23/28258)
Row 44358578 (NC_000005.10:115144037::T 12/28258)

- Oct 13, 2022 (156)
69 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 15785929 (NC_000005.9:114479734::TT 1519/3708)
Row 15785930 (NC_000005.9:114479734::TTT 12/3708)

- Oct 12, 2018 (152)
70 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 15785929 (NC_000005.9:114479734::TT 1519/3708)
Row 15785930 (NC_000005.9:114479734::TTT 12/3708)

- Oct 12, 2018 (152)
71 ALFA NC_000005.10 - 115144038 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs375796677 May 15, 2013 (138)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4127207508 NC_000005.10:115144037:TTT: NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTT

(self)
8280565372 NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTT

NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTT

(self)
8280565372 NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTT

NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTT

(self)
ss4127207507 NC_000005.10:115144037:T: NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTT

(self)
8280565372 NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTT

NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTT

(self)
ss551699733 NC_000005.8:114507633::T NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTT

(self)
28386968, ss1374339651, ss2997597817, ss3732711307 NC_000005.9:114479734::T NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTT

(self)
ss3715467152, ss3807085290, ss4127207504, ss5265411896, ss5463425849, ss5710521474 NC_000005.10:115144037::T NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTT

(self)
8280565372 NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTT

NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTT

(self)
ss551534058, ss553212985 NC_000005.8:114507633::TT NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTT

(self)
28386968, 11238258, ss663551218, ss1374339654, ss1536475994, ss1704827216, ss1704827223, ss2030707889, ss2626106392, ss2997597816, ss3665500010, ss3732711306, ss3785217863, ss3790606628, ss3795483404, ss3829444281, ss5173599124, ss5835477818 NC_000005.9:114479734::TT NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTT

(self)
ss3065047056, ss3066037065, ss3645901103, ss3715467153, ss3807085289, ss3957430738, ss4127207505, ss5265411895, ss5463425848, ss5710521471, ss5806664852, ss5854970615 NC_000005.10:115144037::TT NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTT

(self)
8280565372 NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTT

NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTT

(self)
ss1704827218, ss1704827225, ss5173599125 NC_000005.9:114479734::TTT NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTTT

(self)
ss3957430739, ss4127207506, ss5265411897, ss5463425850, ss5710521473 NC_000005.10:115144037::TTT NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTTT

(self)
8280565372 NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTTT

NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTTT

(self)
8280565372 NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTTTTTT

NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
Removed from this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Destination RSIDs
ss3475449270 NC_000005.10:115144037:TT: NC_000005.10:115144037:TTTTTTTTTT:…

NC_000005.10:115144037:TTTTTTTTTT:TTTTTTTT

Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs371373270

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d