Name: rs544283626
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs544283626

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr6:158872673-158872692 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₇ / del(T)₆ / del(T)₄ / delT…
del(T)₇ / del(T)₆ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / ins(T)₃₆
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.2391 (1300/5436, ALFA)
delT=0.4944 (2476/5008, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC02901 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	5436	TTTTTTTTTTTTTTTTTTTT=0.6900	TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0075, TTTTTTTTTTTTTTTTTT=0.0627, TTTTTTTTTTTTTTTTTTT=0.2391, TTTTTTTTTTTTTTTTTTTTT=0.0004, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0002, TTTTTTTTTTTTTTTTTTTTTTTT=0.0000	0.632203	0.100424	0.267373	32
European	Sub	5034	TTTTTTTTTTTTTTTTTTTT=0.6663	TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0077, TTTTTTTTTTTTTTTTTT=0.0673, TTTTTTTTTTTTTTTTTTT=0.2580, TTTTTTTTTTTTTTTTTTTTT=0.0004, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0002, TTTTTTTTTTTTTTTTTTTTTTTT=0.0000	0.59852	0.109621	0.291859	32
African	Sub	68	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African Others	Sub	0	TTTTTTTTTTTTTTTTTTTT=0	TTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
African American	Sub	68	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Asian	Sub	50	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	38	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	12	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	10	TTTTTTTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	200	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	16	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	58	TTTTTTTTTTTTTTTTTTTT=0.91	TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.03, TTTTTTTTTTTTTTTTTT=0.03, TTTTTTTTTTTTTTTTTTT=0.02, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	5436	(T)₂₀=0.6900	del(T)₇=0.0000, del(T)₄=0.0000, delTTT=0.0075, delTT=0.0627, delT=0.2391, dupT=0.0004, dup(T)₄=0.0000, ins(T)₃₆=0.0002
Allele Frequency Aggregator	European	Sub	5034	(T)₂₀=0.6663	del(T)₇=0.0000, del(T)₄=0.0000, delTTT=0.0077, delTT=0.0673, delT=0.2580, dupT=0.0004, dup(T)₄=0.0000, ins(T)₃₆=0.0002
Allele Frequency Aggregator	Latin American 2	Sub	200	(T)₂₀=1.000	del(T)₇=0.000, del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dup(T)₄=0.000, ins(T)₃₆=0.000
Allele Frequency Aggregator	African	Sub	68	(T)₂₀=1.00	del(T)₇=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dup(T)₄=0.00, ins(T)₃₆=0.00
Allele Frequency Aggregator	Other	Sub	58	(T)₂₀=0.91	del(T)₇=0.00, del(T)₄=0.00, delTTT=0.03, delTT=0.03, delT=0.02, dupT=0.00, dup(T)₄=0.00, ins(T)₃₆=0.00
Allele Frequency Aggregator	Asian	Sub	50	(T)₂₀=1.00	del(T)₇=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dup(T)₄=0.00, ins(T)₃₆=0.00
Allele Frequency Aggregator	South Asian	Sub	16	(T)₂₀=1.00	del(T)₇=0.00, del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dup(T)₄=0.00, ins(T)₃₆=0.00
Allele Frequency Aggregator	Latin American 1	Sub	10	(T)₂₀=1.0	del(T)₇=0.0, del(T)₄=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dup(T)₄=0.0, ins(T)₃₆=0.0
1000Genomes	Global	Study-wide	5008	(T)₂₀=0.5056	delT=0.4944
1000Genomes	African	Sub	1322	(T)₂₀=0.3994	delT=0.6006
1000Genomes	East Asian	Sub	1008	(T)₂₀=0.7956	delT=0.2044
1000Genomes	Europe	Sub	1006	(T)₂₀=0.3549	delT=0.6451
1000Genomes	South Asian	Sub	978	(T)₂₀=0.445	delT=0.555
1000Genomes	American	Sub	694	(T)₂₀=0.591	delT=0.409

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 6	NC_000006.12:g.158872686_158872692del
GRCh38.p14 chr 6	NC_000006.12:g.158872687_158872692del
GRCh38.p14 chr 6	NC_000006.12:g.158872689_158872692del
GRCh38.p14 chr 6	NC_000006.12:g.158872690_158872692del
GRCh38.p14 chr 6	NC_000006.12:g.158872691_158872692del
GRCh38.p14 chr 6	NC_000006.12:g.158872692del
GRCh38.p14 chr 6	NC_000006.12:g.158872692dup
GRCh38.p14 chr 6	NC_000006.12:g.158872691_158872692dup
GRCh38.p14 chr 6	NC_000006.12:g.158872690_158872692dup
GRCh38.p14 chr 6	NC_000006.12:g.158872689_158872692dup
GRCh38.p14 chr 6	NC_000006.12:g.158872692_158872693insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
GRCh37.p13 chr 6	NC_000006.11:g.159293718_159293724del
GRCh37.p13 chr 6	NC_000006.11:g.159293719_159293724del
GRCh37.p13 chr 6	NC_000006.11:g.159293721_159293724del
GRCh37.p13 chr 6	NC_000006.11:g.159293722_159293724del
GRCh37.p13 chr 6	NC_000006.11:g.159293723_159293724del
GRCh37.p13 chr 6	NC_000006.11:g.159293724del
GRCh37.p13 chr 6	NC_000006.11:g.159293724dup
GRCh37.p13 chr 6	NC_000006.11:g.159293723_159293724dup
GRCh37.p13 chr 6	NC_000006.11:g.159293722_159293724dup
GRCh37.p13 chr 6	NC_000006.11:g.159293721_159293724dup
GRCh37.p13 chr 6	NC_000006.11:g.159293724_159293725insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Gene: LINC02901, long intergenic non-protein coding RNA 2901 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC02901 transcript variant 1	NR_160976.1:n.	N/A	Intron Variant
LINC02901 transcript variant 2	NR_160977.1:n.	N/A	Intron Variant
LINC02901 transcript variant 3	NR_160978.1:n.	N/A	Intron Variant
LINC02901 transcript variant 5	NR_160980.1:n.	N/A	Intron Variant
LINC02901 transcript variant 6	NR_160981.1:n.	N/A	Intron Variant
LINC02901 transcript variant 7	NR_160982.1:n.	N/A	Intron Variant
LINC02901 transcript variant 4	NR_160979.1:n.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₂₀=	del(T)₇	del(T)₆	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	ins(T)₃₆
GRCh38.p14 chr 6	NC_000006.12:g.158872673_158872692=	NC_000006.12:g.158872686_158872692del	NC_000006.12:g.158872687_158872692del	NC_000006.12:g.158872689_158872692del	NC_000006.12:g.158872690_158872692del	NC_000006.12:g.158872691_158872692del	NC_000006.12:g.158872692del	NC_000006.12:g.158872692dup	NC_000006.12:g.158872691_158872692dup	NC_000006.12:g.158872690_158872692dup	NC_000006.12:g.158872689_158872692dup	NC_000006.12:g.158872692_158872693insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
GRCh37.p13 chr 6	NC_000006.11:g.159293705_159293724=	NC_000006.11:g.159293718_159293724del	NC_000006.11:g.159293719_159293724del	NC_000006.11:g.159293721_159293724del	NC_000006.11:g.159293722_159293724del	NC_000006.11:g.159293723_159293724del	NC_000006.11:g.159293724del	NC_000006.11:g.159293724dup	NC_000006.11:g.159293723_159293724dup	NC_000006.11:g.159293722_159293724dup	NC_000006.11:g.159293721_159293724dup	NC_000006.11:g.159293724_159293725insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
C6orf99 transcript variant X1	XM_005266787.1:c.59-855=	XM_005266787.1:c.59-842_59-836del	XM_005266787.1:c.59-841_59-836del	XM_005266787.1:c.59-839_59-836del	XM_005266787.1:c.59-838_59-836del	XM_005266787.1:c.59-837_59-836del	XM_005266787.1:c.59-836del	XM_005266787.1:c.59-836dup	XM_005266787.1:c.59-837_59-836dup	XM_005266787.1:c.59-838_59-836dup	XM_005266787.1:c.59-839_59-836dup	XM_005266787.1:c.59-836_59-835insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
C6orf99 transcript variant X2	XM_005266788.1:c.120+2363=	XM_005266788.1:c.120+2376_120+2382del	XM_005266788.1:c.120+2377_120+2382del	XM_005266788.1:c.120+2379_120+2382del	XM_005266788.1:c.120+2380_120+2382del	XM_005266788.1:c.120+2381_120+2382del	XM_005266788.1:c.120+2382del	XM_005266788.1:c.120+2382dup	XM_005266788.1:c.120+2381_120+2382dup	XM_005266788.1:c.120+2380_120+2382dup	XM_005266788.1:c.120+2379_120+2382dup	XM_005266788.1:c.120+2382_120+2383insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

44 SubSNP, 29 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	1000GENOMES	ss1376470253	Aug 21, 2014 (142)
2	EVA_UK10K_ALSPAC	ss1705447244	Apr 01, 2015 (144)
3	EVA_UK10K_TWINSUK	ss1705447414	Apr 01, 2015 (144)
4	EVA_UK10K_ALSPAC	ss1710303815	Apr 01, 2015 (144)
5	EVA_UK10K_TWINSUK	ss1710303816	Apr 01, 2015 (144)
6	SWEGEN	ss3000281233	Nov 08, 2017 (151)
7	URBANLAB	ss3648512730	Oct 12, 2018 (152)
8	EVA_DECODE	ss3718686448	Jul 13, 2019 (153)
9	EVA_DECODE	ss3718686449	Jul 13, 2019 (153)
10	EVA_DECODE	ss3718686450	Jul 13, 2019 (153)
11	EVA_DECODE	ss3718686451	Jul 13, 2019 (153)
12	PACBIO	ss3785674746	Jul 13, 2019 (153)
13	PACBIO	ss3790993275	Jul 13, 2019 (153)
14	PACBIO	ss3795872741	Jul 13, 2019 (153)
15	KHV_HUMAN_GENOMES	ss3809088068	Jul 13, 2019 (153)
16	EVA	ss3830298585	Apr 26, 2020 (154)
17	KOGIC	ss3960473154	Apr 26, 2020 (154)
18	KOGIC	ss3960473155	Apr 26, 2020 (154)
19	KOGIC	ss3960473156	Apr 26, 2020 (154)
20	KOGIC	ss3960473157	Apr 26, 2020 (154)
21	KOGIC	ss3960473158	Apr 26, 2020 (154)
22	GNOMAD	ss4155010151	Apr 26, 2021 (155)
23	GNOMAD	ss4155010152	Apr 26, 2021 (155)
24	GNOMAD	ss4155010153	Apr 26, 2021 (155)
25	GNOMAD	ss4155010155	Apr 26, 2021 (155)
26	GNOMAD	ss4155010156	Apr 26, 2021 (155)
27	GNOMAD	ss4155010157	Apr 26, 2021 (155)
28	TOMMO_GENOMICS	ss5180858716	Apr 26, 2021 (155)
29	TOMMO_GENOMICS	ss5180858717	Apr 26, 2021 (155)
30	TOMMO_GENOMICS	ss5180858718	Apr 26, 2021 (155)
31	TOMMO_GENOMICS	ss5180858719	Apr 26, 2021 (155)
32	TOMMO_GENOMICS	ss5180858720	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5180858721	Apr 26, 2021 (155)
34	1000G_HIGH_COVERAGE	ss5271080824	Oct 14, 2022 (156)
35	HUGCELL_USP	ss5468459749	Oct 14, 2022 (156)
36	HUGCELL_USP	ss5468459750	Oct 14, 2022 (156)
37	HUGCELL_USP	ss5468459751	Oct 14, 2022 (156)
38	HUGCELL_USP	ss5468459752	Oct 14, 2022 (156)
39	TOMMO_GENOMICS	ss5720009724	Oct 14, 2022 (156)
40	TOMMO_GENOMICS	ss5720009725	Oct 14, 2022 (156)
41	TOMMO_GENOMICS	ss5720009726	Oct 14, 2022 (156)
42	TOMMO_GENOMICS	ss5720009727	Oct 14, 2022 (156)
43	TOMMO_GENOMICS	ss5720009728	Oct 14, 2022 (156)
44	TOMMO_GENOMICS	ss5720009729	Oct 14, 2022 (156)
45	1000Genomes	NC_000006.11 - 159293705	Oct 12, 2018 (152)
46	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 19521400 (NC_000006.11:159293705:T: 2929/3854) Row 19521401 (NC_000006.11:159293704:TTT: 770/3854)	-	Oct 12, 2018 (152)
47	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 19521400 (NC_000006.11:159293705:T: 2929/3854) Row 19521401 (NC_000006.11:159293704:TTT: 770/3854)	-	Oct 12, 2018 (152)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 247107556 (NC_000006.12:158872672::T 197/99440) Row 247107557 (NC_000006.12:158872672::TT 12/99450) Row 247107558 (NC_000006.12:158872672::TTT 2/99458)...	-	Apr 26, 2021 (155)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 247107556 (NC_000006.12:158872672::T 197/99440) Row 247107557 (NC_000006.12:158872672::TT 12/99450) Row 247107558 (NC_000006.12:158872672::TTT 2/99458)...	-	Apr 26, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 247107556 (NC_000006.12:158872672::T 197/99440) Row 247107557 (NC_000006.12:158872672::TT 12/99450) Row 247107558 (NC_000006.12:158872672::TTT 2/99458)...	-	Apr 26, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 247107556 (NC_000006.12:158872672::T 197/99440) Row 247107557 (NC_000006.12:158872672::TT 12/99450) Row 247107558 (NC_000006.12:158872672::TTT 2/99458)...	-	Apr 26, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 247107556 (NC_000006.12:158872672::T 197/99440) Row 247107557 (NC_000006.12:158872672::TT 12/99450) Row 247107558 (NC_000006.12:158872672::TTT 2/99458)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 247107556 (NC_000006.12:158872672::T 197/99440) Row 247107557 (NC_000006.12:158872672::TT 12/99450) Row 247107558 (NC_000006.12:158872672::TTT 2/99458)...	-	Apr 26, 2021 (155)
54	Korean Genome Project Submission ignored due to conflicting rows: Row 16851155 (NC_000006.12:158872675:T: 244/1830) Row 16851156 (NC_000006.12:158872676::T 111/1830) Row 16851157 (NC_000006.12:158872673:TTT: 313/1830)...	-	Apr 26, 2020 (154)
55	Korean Genome Project Submission ignored due to conflicting rows: Row 16851155 (NC_000006.12:158872675:T: 244/1830) Row 16851156 (NC_000006.12:158872676::T 111/1830) Row 16851157 (NC_000006.12:158872673:TTT: 313/1830)...	-	Apr 26, 2020 (154)
56	Korean Genome Project Submission ignored due to conflicting rows: Row 16851155 (NC_000006.12:158872675:T: 244/1830) Row 16851156 (NC_000006.12:158872676::T 111/1830) Row 16851157 (NC_000006.12:158872673:TTT: 313/1830)...	-	Apr 26, 2020 (154)
57	Korean Genome Project Submission ignored due to conflicting rows: Row 16851155 (NC_000006.12:158872675:T: 244/1830) Row 16851156 (NC_000006.12:158872676::T 111/1830) Row 16851157 (NC_000006.12:158872673:TTT: 313/1830)...	-	Apr 26, 2020 (154)
58	Korean Genome Project Submission ignored due to conflicting rows: Row 16851155 (NC_000006.12:158872675:T: 244/1830) Row 16851156 (NC_000006.12:158872676::T 111/1830) Row 16851157 (NC_000006.12:158872673:TTT: 313/1830)...	-	Apr 26, 2020 (154)
59	8.3KJPN Submission ignored due to conflicting rows: Row 38828023 (NC_000006.11:159293704:TTT: 2717/16686) Row 38828024 (NC_000006.11:159293704:T: 1362/16686) Row 38828025 (NC_000006.11:159293704::T 544/16686)...	-	Apr 26, 2021 (155)
60	8.3KJPN Submission ignored due to conflicting rows: Row 38828023 (NC_000006.11:159293704:TTT: 2717/16686) Row 38828024 (NC_000006.11:159293704:T: 1362/16686) Row 38828025 (NC_000006.11:159293704::T 544/16686)...	-	Apr 26, 2021 (155)
61	8.3KJPN Submission ignored due to conflicting rows: Row 38828023 (NC_000006.11:159293704:TTT: 2717/16686) Row 38828024 (NC_000006.11:159293704:T: 1362/16686) Row 38828025 (NC_000006.11:159293704::T 544/16686)...	-	Apr 26, 2021 (155)
62	8.3KJPN Submission ignored due to conflicting rows: Row 38828023 (NC_000006.11:159293704:TTT: 2717/16686) Row 38828024 (NC_000006.11:159293704:T: 1362/16686) Row 38828025 (NC_000006.11:159293704::T 544/16686)...	-	Apr 26, 2021 (155)
63	8.3KJPN Submission ignored due to conflicting rows: Row 38828023 (NC_000006.11:159293704:TTT: 2717/16686) Row 38828024 (NC_000006.11:159293704:T: 1362/16686) Row 38828025 (NC_000006.11:159293704::T 544/16686)...	-	Apr 26, 2021 (155)
64	8.3KJPN Submission ignored due to conflicting rows: Row 38828023 (NC_000006.11:159293704:TTT: 2717/16686) Row 38828024 (NC_000006.11:159293704:T: 1362/16686) Row 38828025 (NC_000006.11:159293704::T 544/16686)...	-	Apr 26, 2021 (155)
65	14KJPN Submission ignored due to conflicting rows: Row 53846828 (NC_000006.12:158872672:TTT: 4811/28250) Row 53846829 (NC_000006.12:158872672:T: 2530/28250) Row 53846830 (NC_000006.12:158872672:TT: 747/28250)...	-	Oct 14, 2022 (156)
66	14KJPN Submission ignored due to conflicting rows: Row 53846828 (NC_000006.12:158872672:TTT: 4811/28250) Row 53846829 (NC_000006.12:158872672:T: 2530/28250) Row 53846830 (NC_000006.12:158872672:TT: 747/28250)...	-	Oct 14, 2022 (156)
67	14KJPN Submission ignored due to conflicting rows: Row 53846828 (NC_000006.12:158872672:TTT: 4811/28250) Row 53846829 (NC_000006.12:158872672:T: 2530/28250) Row 53846830 (NC_000006.12:158872672:TT: 747/28250)...	-	Oct 14, 2022 (156)
68	14KJPN Submission ignored due to conflicting rows: Row 53846828 (NC_000006.12:158872672:TTT: 4811/28250) Row 53846829 (NC_000006.12:158872672:T: 2530/28250) Row 53846830 (NC_000006.12:158872672:TT: 747/28250)...	-	Oct 14, 2022 (156)
69	14KJPN Submission ignored due to conflicting rows: Row 53846828 (NC_000006.12:158872672:TTT: 4811/28250) Row 53846829 (NC_000006.12:158872672:T: 2530/28250) Row 53846830 (NC_000006.12:158872672:TT: 747/28250)...	-	Oct 14, 2022 (156)
70	14KJPN Submission ignored due to conflicting rows: Row 53846828 (NC_000006.12:158872672:TTT: 4811/28250) Row 53846829 (NC_000006.12:158872672:T: 2530/28250) Row 53846830 (NC_000006.12:158872672:TT: 747/28250)...	-	Oct 14, 2022 (156)
71	UK 10K study - Twins Submission ignored due to conflicting rows: Row 19521400 (NC_000006.11:159293705:T: 2764/3708) Row 19521401 (NC_000006.11:159293704:TTT: 747/3708)	-	Oct 12, 2018 (152)
72	UK 10K study - Twins Submission ignored due to conflicting rows: Row 19521400 (NC_000006.11:159293705:T: 2764/3708) Row 19521401 (NC_000006.11:159293704:TTT: 747/3708)	-	Oct 12, 2018 (152)
73	ALFA	NC_000006.12 - 158872673	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
4842993694	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4155010157	NC_000006.12:158872672:TTTTTT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss5180858720	NC_000006.11:159293704:TTTT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3960473158, ss4155010156, ss5720009728	NC_000006.12:158872672:TTTT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
4842993694	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss1705447244, ss1705447414, ss3000281233, ss5180858716	NC_000006.11:159293704:TTT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3718686448, ss4155010155, ss5468459751, ss5720009724	NC_000006.12:158872672:TTT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
4842993694	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3960473156	NC_000006.12:158872673:TTT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3830298585, ss5180858719	NC_000006.11:159293704:TT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss1710303815, ss1710303816	NC_000006.11:159293705:TT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss5271080824, ss5468459749, ss5720009726	NC_000006.12:158872672:TT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
4842993694	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3718686449	NC_000006.12:158872673:TT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3960473157	NC_000006.12:158872674:TT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
35003885, ss1376470253, ss3785674746, ss3790993275, ss3795872741, ss5180858717	NC_000006.11:159293704:T:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
	NC_000006.11:159293705:T:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss3648512730, ss3809088068, ss5468459750, ss5720009725	NC_000006.12:158872672:T:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
4842993694	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss3718686450	NC_000006.12:158872674:T:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss3960473154	NC_000006.12:158872675:T:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss5180858718	NC_000006.11:159293704::T	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4155010151, ss5468459752, ss5720009727	NC_000006.12:158872672::T	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
4842993694	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss3718686451	NC_000006.12:158872675::T	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss3960473155	NC_000006.12:158872676::T	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss5180858721	NC_000006.11:159293704::TT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss4155010152, ss5720009729	NC_000006.12:158872672::TT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss4155010153	NC_000006.12:158872672::TTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
4842993694	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	(self)
4842993694	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3517266833	NC_000006.12:158872672::TTTT	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT
ss3517266839	NC_000006.12:158872672:TTTTTTT:	NC_000006.12:158872672:TTTTTTTTTTT… NC_000006.12:158872672:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs544283626

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs544283626