Name: rs55809232
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs55809232

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:129974829-129974844 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₄ / delAAA / delAA / delA / …
del(A)₄ / delAAA / delAA / delA / dupA / dupAA / dupAAA
Variation Type: Indel Insertion and Deletion
Frequency: (A)₁₆=0.4724 (2366/5008, 1000G)
del(A)₄=0.000 (0/880, ALFA)
delAAA=0.000 (0/880, ALFA) (+ 4 more)
delAA=0.000 (0/880, ALFA)
delA=0.000 (0/880, ALFA)
dupA=0.000 (0/880, ALFA)
dupAA=0.000 (0/880, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: RAB6C-AS1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	880	AAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
European	Sub	716	AAAAAAAAAAAAAAAA=1.000	AAAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
African	Sub	64	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African Others	Sub	0	AAAAAAAAAAAAAAAA=0	AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAA=0	0	0	0	N/A
African American	Sub	64	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Asian	Sub	2	AAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
East Asian	Sub	0	AAAAAAAAAAAAAAAA=0	AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAA=0	0	0	0	N/A
Other Asian	Sub	2	AAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	6	AAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	54	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	8	AAAAAAAAAAAAAAAA=1.0	AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Other	Sub	30	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupA=0.5276
1000Genomes	African	Sub	1322	- No frequency provided	dupA=0.3563
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupA=0.5526
1000Genomes	Europe	Sub	1006	- No frequency provided	dupA=0.5855
1000Genomes	South Asian	Sub	978	- No frequency provided	dupA=0.615
1000Genomes	American	Sub	694	- No frequency provided	dupA=0.611
Allele Frequency Aggregator	Total	Global	880	(A)₁₆=1.000	del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	European	Sub	716	(A)₁₆=1.000	del(A)₄=0.000, delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000
Allele Frequency Aggregator	African	Sub	64	(A)₁₆=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Latin American 2	Sub	54	(A)₁₆=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	Other	Sub	30	(A)₁₆=1.00	del(A)₄=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00
Allele Frequency Aggregator	South Asian	Sub	8	(A)₁₆=1.0	del(A)₄=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator	Latin American 1	Sub	6	(A)₁₆=1.0	del(A)₄=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0
Allele Frequency Aggregator	Asian	Sub	2	(A)₁₆=1.0	del(A)₄=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.129974841_129974844del
GRCh38.p14 chr 2	NC_000002.12:g.129974842_129974844del
GRCh38.p14 chr 2	NC_000002.12:g.129974843_129974844del
GRCh38.p14 chr 2	NC_000002.12:g.129974844del
GRCh38.p14 chr 2	NC_000002.12:g.129974844dup
GRCh38.p14 chr 2	NC_000002.12:g.129974843_129974844dup
GRCh38.p14 chr 2	NC_000002.12:g.129974842_129974844dup
GRCh37.p13 chr 2	NC_000002.11:g.130732414_130732417del
GRCh37.p13 chr 2	NC_000002.11:g.130732415_130732417del
GRCh37.p13 chr 2	NC_000002.11:g.130732416_130732417del
GRCh37.p13 chr 2	NC_000002.11:g.130732417del
GRCh37.p13 chr 2	NC_000002.11:g.130732417dup
GRCh37.p13 chr 2	NC_000002.11:g.130732416_130732417dup
GRCh37.p13 chr 2	NC_000002.11:g.130732415_130732417dup
GRCh38.p14 chr 2 novel patch HSCHR2_12_CTG7_2	NW_025791762.1:g.147083_147086del
GRCh38.p14 chr 2 novel patch HSCHR2_12_CTG7_2	NW_025791762.1:g.147084_147086del
GRCh38.p14 chr 2 novel patch HSCHR2_12_CTG7_2	NW_025791762.1:g.147085_147086del
GRCh38.p14 chr 2 novel patch HSCHR2_12_CTG7_2	NW_025791762.1:g.147086del
GRCh38.p14 chr 2 novel patch HSCHR2_12_CTG7_2	NW_025791762.1:g.147086dup
GRCh38.p14 chr 2 novel patch HSCHR2_12_CTG7_2	NW_025791762.1:g.147085_147086dup
GRCh38.p14 chr 2 novel patch HSCHR2_12_CTG7_2	NW_025791762.1:g.147084_147086dup

Gene: RAB6C-AS1, RAB6C antisense RNA 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
RAB6C-AS1 transcript	NR_036537.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₆=	del(A)₄	delAAA	delAA	delA	dupA	dupAA	dupAAA
GRCh38.p14 chr 2	NC_000002.12:g.129974829_129974844=	NC_000002.12:g.129974841_129974844del	NC_000002.12:g.129974842_129974844del	NC_000002.12:g.129974843_129974844del	NC_000002.12:g.129974844del	NC_000002.12:g.129974844dup	NC_000002.12:g.129974843_129974844dup	NC_000002.12:g.129974842_129974844dup
GRCh37.p13 chr 2	NC_000002.11:g.130732402_130732417=	NC_000002.11:g.130732414_130732417del	NC_000002.11:g.130732415_130732417del	NC_000002.11:g.130732416_130732417del	NC_000002.11:g.130732417del	NC_000002.11:g.130732417dup	NC_000002.11:g.130732416_130732417dup	NC_000002.11:g.130732415_130732417dup
GRCh38.p14 chr 2 novel patch HSCHR2_12_CTG7_2	NW_025791762.1:g.147071_147086=	NW_025791762.1:g.147083_147086del	NW_025791762.1:g.147084_147086del	NW_025791762.1:g.147085_147086del	NW_025791762.1:g.147086del	NW_025791762.1:g.147086dup	NW_025791762.1:g.147085_147086dup	NW_025791762.1:g.147084_147086dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

50 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss77938027	Dec 03, 2013 (138)
2	HGSV	ss83459441	Sep 08, 2015 (146)
3	HUMANGENOME_JCVI	ss95284887	Dec 05, 2013 (138)
4	BUSHMAN	ss193562763	Oct 11, 2018 (152)
5	PJP	ss295002611	May 09, 2011 (137)
6	1000GENOMES	ss1368773983	Aug 21, 2014 (142)
7	EVA_UK10K_TWINSUK	ss1703139146	Apr 01, 2015 (144)
8	EVA_UK10K_TWINSUK	ss1703139153	Apr 01, 2015 (144)
9	EVA_UK10K_ALSPAC	ss1703139155	Apr 01, 2015 (144)
10	EVA_UK10K_ALSPAC	ss1703139157	Apr 01, 2015 (144)
11	HAMMER_LAB	ss1797502612	Jan 10, 2018 (151)
12	SWEGEN	ss2990398238	Jan 10, 2018 (151)
13	MCHAISSO	ss3065765599	Jan 10, 2018 (151)
14	URBANLAB	ss3647142458	Oct 11, 2018 (152)
15	EVA_DECODE	ss3704883919	Jul 13, 2019 (153)
16	EVA_DECODE	ss3704883920	Jul 13, 2019 (153)
17	EVA_DECODE	ss3704883921	Jul 13, 2019 (153)
18	EVA_DECODE	ss3704883922	Jul 13, 2019 (153)
19	EVA_DECODE	ss3704883923	Jul 13, 2019 (153)
20	PACBIO	ss3783993933	Jul 13, 2019 (153)
21	PACBIO	ss3789558248	Jul 13, 2019 (153)
22	PACBIO	ss3794431167	Jul 13, 2019 (153)
23	KHV_HUMAN_GENOMES	ss3801740883	Jul 13, 2019 (153)
24	EVA	ss3827219310	Apr 25, 2020 (154)
25	GNOMAD	ss4050620703	Apr 26, 2021 (155)
26	GNOMAD	ss4050620704	Apr 26, 2021 (155)
27	GNOMAD	ss4050620705	Apr 26, 2021 (155)
28	GNOMAD	ss4050620706	Apr 26, 2021 (155)
29	GNOMAD	ss4050620707	Apr 26, 2021 (155)
30	GNOMAD	ss4050620708	Apr 26, 2021 (155)
31	GNOMAD	ss4050620709	Apr 26, 2021 (155)
32	TOMMO_GENOMICS	ss5153815595	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5153815596	Apr 26, 2021 (155)
34	TOMMO_GENOMICS	ss5153815597	Apr 26, 2021 (155)
35	1000G_HIGH_COVERAGE	ss5249979118	Oct 12, 2022 (156)
36	1000G_HIGH_COVERAGE	ss5249979119	Oct 12, 2022 (156)
37	1000G_HIGH_COVERAGE	ss5249979120	Oct 12, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5249979121	Oct 12, 2022 (156)
39	1000G_HIGH_COVERAGE	ss5249979122	Oct 12, 2022 (156)
40	HUGCELL_USP	ss5449819983	Oct 12, 2022 (156)
41	HUGCELL_USP	ss5449819984	Oct 12, 2022 (156)
42	HUGCELL_USP	ss5449819985	Oct 12, 2022 (156)
43	HUGCELL_USP	ss5449819986	Oct 12, 2022 (156)
44	HUGCELL_USP	ss5449819987	Oct 12, 2022 (156)
45	TOMMO_GENOMICS	ss5683923204	Oct 12, 2022 (156)
46	TOMMO_GENOMICS	ss5683923205	Oct 12, 2022 (156)
47	TOMMO_GENOMICS	ss5683923206	Oct 12, 2022 (156)
48	TOMMO_GENOMICS	ss5683923208	Oct 12, 2022 (156)
49	EVA	ss5820792459	Oct 12, 2022 (156)
50	EVA	ss5820792460	Oct 12, 2022 (156)
51	1000Genomes	NC_000002.11 - 130732402	Oct 11, 2018 (152)
52	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 5697809 (NC_000002.11:130732401::A 2298/3854) Row 5697810 (NC_000002.11:130732401::AA 438/3854)	-	Oct 11, 2018 (152)
53	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 5697809 (NC_000002.11:130732401::A 2298/3854) Row 5697810 (NC_000002.11:130732401::AA 438/3854)	-	Oct 11, 2018 (152)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 73547650 (NC_000002.12:129974828::A 70015/118798) Row 73547651 (NC_000002.12:129974828::AA 883/118964) Row 73547652 (NC_000002.12:129974828::AAA 3/119148)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 73547650 (NC_000002.12:129974828::A 70015/118798) Row 73547651 (NC_000002.12:129974828::AA 883/118964) Row 73547652 (NC_000002.12:129974828::AAA 3/119148)...	-	Apr 26, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 73547650 (NC_000002.12:129974828::A 70015/118798) Row 73547651 (NC_000002.12:129974828::AA 883/118964) Row 73547652 (NC_000002.12:129974828::AAA 3/119148)...	-	Apr 26, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 73547650 (NC_000002.12:129974828::A 70015/118798) Row 73547651 (NC_000002.12:129974828::AA 883/118964) Row 73547652 (NC_000002.12:129974828::AAA 3/119148)...	-	Apr 26, 2021 (155)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 73547650 (NC_000002.12:129974828::A 70015/118798) Row 73547651 (NC_000002.12:129974828::AA 883/118964) Row 73547652 (NC_000002.12:129974828::AAA 3/119148)...	-	Apr 26, 2021 (155)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 73547650 (NC_000002.12:129974828::A 70015/118798) Row 73547651 (NC_000002.12:129974828::AA 883/118964) Row 73547652 (NC_000002.12:129974828::AAA 3/119148)...	-	Apr 26, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 73547650 (NC_000002.12:129974828::A 70015/118798) Row 73547651 (NC_000002.12:129974828::AA 883/118964) Row 73547652 (NC_000002.12:129974828::AAA 3/119148)...	-	Apr 26, 2021 (155)
61	8.3KJPN Submission ignored due to conflicting rows: Row 11784902 (NC_000002.11:130732401::A 10407/16598) Row 11784903 (NC_000002.11:130732401:AA: 969/16598) Row 11784904 (NC_000002.11:130732401::AA 16/16598)	-	Apr 26, 2021 (155)
62	8.3KJPN Submission ignored due to conflicting rows: Row 11784902 (NC_000002.11:130732401::A 10407/16598) Row 11784903 (NC_000002.11:130732401:AA: 969/16598) Row 11784904 (NC_000002.11:130732401::AA 16/16598)	-	Apr 26, 2021 (155)
63	8.3KJPN Submission ignored due to conflicting rows: Row 11784902 (NC_000002.11:130732401::A 10407/16598) Row 11784903 (NC_000002.11:130732401:AA: 969/16598) Row 11784904 (NC_000002.11:130732401::AA 16/16598)	-	Apr 26, 2021 (155)
64	14KJPN Submission ignored due to conflicting rows: Row 17760308 (NC_000002.12:129974828::A 17904/28248) Row 17760309 (NC_000002.12:129974828:AA: 1720/28248) Row 17760310 (NC_000002.12:129974828::AA 17/28248)...	-	Oct 12, 2022 (156)
65	14KJPN Submission ignored due to conflicting rows: Row 17760308 (NC_000002.12:129974828::A 17904/28248) Row 17760309 (NC_000002.12:129974828:AA: 1720/28248) Row 17760310 (NC_000002.12:129974828::AA 17/28248)...	-	Oct 12, 2022 (156)
66	14KJPN Submission ignored due to conflicting rows: Row 17760308 (NC_000002.12:129974828::A 17904/28248) Row 17760309 (NC_000002.12:129974828:AA: 1720/28248) Row 17760310 (NC_000002.12:129974828::AA 17/28248)...	-	Oct 12, 2022 (156)
67	14KJPN Submission ignored due to conflicting rows: Row 17760308 (NC_000002.12:129974828::A 17904/28248) Row 17760309 (NC_000002.12:129974828:AA: 1720/28248) Row 17760310 (NC_000002.12:129974828::AA 17/28248)...	-	Oct 12, 2022 (156)
68	UK 10K study - Twins Submission ignored due to conflicting rows: Row 5697809 (NC_000002.11:130732401::A 2254/3708) Row 5697810 (NC_000002.11:130732401::AA 371/3708)	-	Oct 11, 2018 (152)
69	UK 10K study - Twins Submission ignored due to conflicting rows: Row 5697809 (NC_000002.11:130732401::A 2254/3708) Row 5697810 (NC_000002.11:130732401::AA 371/3708)	-	Oct 11, 2018 (152)
70	ALFA	NC_000002.12 - 129974829	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57690229	May 11, 2012 (137)
rs150528230	May 11, 2012 (137)
rs796975863	Nov 08, 2017 (151)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4050620709	NC_000002.12:129974828:AAAA:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
2805885736	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3704883923, ss4050620708, ss5249979120, ss5449819984, ss5683923208	NC_000002.12:129974828:AAA:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
2805885736	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss83459441	NC_000002.9:130448645:AA:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss1797502612, ss2990398238, ss3827219310, ss5153815596	NC_000002.11:130732401:AA:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3065765599, ss4050620707, ss5249979119, ss5449819985, ss5683923205	NC_000002.12:129974828:AA:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
2805885736	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3704883922	NC_000002.12:129974829:AA:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss193562763	NT_022135.16:20481064:AA:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss4050620706, ss5249979122, ss5449819986	NC_000002.12:129974828:A:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
2805885736	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3704883921	NC_000002.12:129974830:A:	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss295002611	NC_000002.10:130448872::A	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
10313392, ss1368773983, ss1703139146, ss1703139155, ss3783993933, ss3789558248, ss3794431167, ss5153815595, ss5820792459	NC_000002.11:130732401::A	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3647142458, ss3801740883, ss4050620703, ss5249979118, ss5449819983, ss5683923204	NC_000002.12:129974828::A	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
2805885736	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3704883920	NC_000002.12:129974831::A	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss77938027, ss95284887	NT_022135.16:20481080::A	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss1703139153, ss1703139157, ss5153815597, ss5820792460	NC_000002.11:130732401::AA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss4050620704, ss5249979121, ss5449819987, ss5683923206	NC_000002.12:129974828::AA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
2805885736	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss3704883919	NC_000002.12:129974831::AA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss4050620705	NC_000002.12:129974828::AAA	NC_000002.12:129974828:AAAAAAAAAAA… NC_000002.12:129974828:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs55809232

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs55809232