Name: rs58057149
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs58057149

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr17:15107960-15107975 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(A)₇ / del(A)₅ / del(A)₄ / delA…
del(A)₇ / del(A)₅ / del(A)₄ / delAAA / delAA / delA / dupA / dupAA / dupAAA / dup(A)₄
Variation Type: Indel Insertion and Deletion
Frequency: dupA=0.0984 (493/5008, 1000G)
del(A)₇=0.0000 (0/4686, ALFA)
del(A)₅=0.0000 (0/4686, ALFA) (+ 6 more)
delAA=0.0000 (0/4686, ALFA)
delA=0.0000 (0/4686, ALFA)
dupA=0.0000 (0/4686, ALFA)
dupAA=0.0000 (0/4686, ALFA)
dupAAA=0.0000 (0/4686, ALFA)
dup(A)₄=0.0000 (0/4686, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: CDRT8 : 2KB Upstream Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	4686	AAAAAAAAAAAAAAAA=1.0000	AAAAAAAAA=0.0000, AAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
European	Sub	3350	AAAAAAAAAAAAAAAA=1.0000	AAAAAAAAA=0.0000, AAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African	Sub	608	AAAAAAAAAAAAAAAA=1.000	AAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
African Others	Sub	18	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
African American	Sub	590	AAAAAAAAAAAAAAAA=1.000	AAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
Asian	Sub	72	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
East Asian	Sub	50	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other Asian	Sub	22	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Latin American 1	Sub	50	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Latin American 2	Sub	388	AAAAAAAAAAAAAAAA=1.000	AAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
South Asian	Sub	58	AAAAAAAAAAAAAAAA=1.00	AAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other	Sub	160	AAAAAAAAAAAAAAAA=1.000	AAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupA=0.0984
1000Genomes	African	Sub	1322	- No frequency provided	dupA=0.1936
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupA=0.0813
1000Genomes	Europe	Sub	1006	- No frequency provided	dupA=0.0616
1000Genomes	South Asian	Sub	978	- No frequency provided	dupA=0.049
1000Genomes	American	Sub	694	- No frequency provided	dupA=0.065
Allele Frequency Aggregator	Total	Global	4686	(A)₁₆=1.0000	del(A)₇=0.0000, del(A)₅=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000, dupAAA=0.0000, dup(A)₄=0.0000
Allele Frequency Aggregator	European	Sub	3350	(A)₁₆=1.0000	del(A)₇=0.0000, del(A)₅=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dupAA=0.0000, dupAAA=0.0000, dup(A)₄=0.0000
Allele Frequency Aggregator	African	Sub	608	(A)₁₆=1.000	del(A)₇=0.000, del(A)₅=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Latin American 2	Sub	388	(A)₁₆=1.000	del(A)₇=0.000, del(A)₅=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Other	Sub	160	(A)₁₆=1.000	del(A)₇=0.000, del(A)₅=0.000, delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Asian	Sub	72	(A)₁₆=1.00	del(A)₇=0.00, del(A)₅=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00, dup(A)₄=0.00
Allele Frequency Aggregator	South Asian	Sub	58	(A)₁₆=1.00	del(A)₇=0.00, del(A)₅=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00, dup(A)₄=0.00
Allele Frequency Aggregator	Latin American 1	Sub	50	(A)₁₆=1.00	del(A)₇=0.00, del(A)₅=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00, dup(A)₄=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 17	NC_000017.11:g.15107969_15107975del
GRCh38.p14 chr 17	NC_000017.11:g.15107971_15107975del
GRCh38.p14 chr 17	NC_000017.11:g.15107972_15107975del
GRCh38.p14 chr 17	NC_000017.11:g.15107973_15107975del
GRCh38.p14 chr 17	NC_000017.11:g.15107974_15107975del
GRCh38.p14 chr 17	NC_000017.11:g.15107975del
GRCh38.p14 chr 17	NC_000017.11:g.15107975dup
GRCh38.p14 chr 17	NC_000017.11:g.15107974_15107975dup
GRCh38.p14 chr 17	NC_000017.11:g.15107973_15107975dup
GRCh38.p14 chr 17	NC_000017.11:g.15107972_15107975dup
GRCh37.p13 chr 17	NC_000017.10:g.15011286_15011292del
GRCh37.p13 chr 17	NC_000017.10:g.15011288_15011292del
GRCh37.p13 chr 17	NC_000017.10:g.15011289_15011292del
GRCh37.p13 chr 17	NC_000017.10:g.15011290_15011292del
GRCh37.p13 chr 17	NC_000017.10:g.15011291_15011292del
GRCh37.p13 chr 17	NC_000017.10:g.15011292del
GRCh37.p13 chr 17	NC_000017.10:g.15011292dup
GRCh37.p13 chr 17	NC_000017.10:g.15011291_15011292dup
GRCh37.p13 chr 17	NC_000017.10:g.15011290_15011292dup
GRCh37.p13 chr 17	NC_000017.10:g.15011289_15011292dup

Gene: CDRT8, CMT1A duplicated region transcript 8 (minus strand) : 2KB Upstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
CDRT8 transcript	NR_103559.1:n.	N/A	Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₆=	del(A)₇	del(A)₅	del(A)₄	delAAA	delAA	delA	dupA	dupAA	dupAAA	dup(A)₄
GRCh38.p14 chr 17	NC_000017.11:g.15107960_15107975=	NC_000017.11:g.15107969_15107975del	NC_000017.11:g.15107971_15107975del	NC_000017.11:g.15107972_15107975del	NC_000017.11:g.15107973_15107975del	NC_000017.11:g.15107974_15107975del	NC_000017.11:g.15107975del	NC_000017.11:g.15107975dup	NC_000017.11:g.15107974_15107975dup	NC_000017.11:g.15107973_15107975dup	NC_000017.11:g.15107972_15107975dup
GRCh37.p13 chr 17	NC_000017.10:g.15011277_15011292=	NC_000017.10:g.15011286_15011292del	NC_000017.10:g.15011288_15011292del	NC_000017.10:g.15011289_15011292del	NC_000017.10:g.15011290_15011292del	NC_000017.10:g.15011291_15011292del	NC_000017.10:g.15011292del	NC_000017.10:g.15011292dup	NC_000017.10:g.15011291_15011292dup	NC_000017.10:g.15011290_15011292dup	NC_000017.10:g.15011289_15011292dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

49 SubSNP, 26 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss80067715	Dec 14, 2007 (129)
2	HGSV	ss81096112	Dec 14, 2007 (129)
3	HUMANGENOME_JCVI	ss95689905	Feb 05, 2009 (130)
4	SSIP	ss947365532	Aug 21, 2014 (142)
5	1000GENOMES	ss1376431917	Aug 21, 2014 (142)
6	SWEGEN	ss3015253366	Nov 08, 2017 (151)
7	URBANLAB	ss3650612259	Oct 12, 2018 (152)
8	EVA_DECODE	ss3700156176	Jul 13, 2019 (153)
9	EVA_DECODE	ss3700156177	Jul 13, 2019 (153)
10	EVA_DECODE	ss3700156178	Jul 13, 2019 (153)
11	EVA_DECODE	ss3700156179	Jul 13, 2019 (153)
12	EVA_DECODE	ss3700156180	Jul 13, 2019 (153)
13	PACBIO	ss3788159832	Jul 13, 2019 (153)
14	PACBIO	ss3793126863	Jul 13, 2019 (153)
15	KHV_HUMAN_GENOMES	ss3819766937	Jul 13, 2019 (153)
16	EVA	ss3834800273	Apr 27, 2020 (154)
17	KOGIC	ss3978471348	Apr 27, 2020 (154)
18	KOGIC	ss3978471349	Apr 27, 2020 (154)
19	KOGIC	ss3978471350	Apr 27, 2020 (154)
20	KOGIC	ss3978471351	Apr 27, 2020 (154)
21	KOGIC	ss3978471352	Apr 27, 2020 (154)
22	GNOMAD	ss4308502047	Apr 26, 2021 (155)
23	GNOMAD	ss4308502048	Apr 26, 2021 (155)
24	GNOMAD	ss4308502049	Apr 26, 2021 (155)
25	GNOMAD	ss4308502050	Apr 26, 2021 (155)
26	GNOMAD	ss4308502051	Apr 26, 2021 (155)
27	GNOMAD	ss4308502052	Apr 26, 2021 (155)
28	GNOMAD	ss4308502053	Apr 26, 2021 (155)
29	GNOMAD	ss4308502054	Apr 26, 2021 (155)
30	GNOMAD	ss4308502055	Apr 26, 2021 (155)
31	TOMMO_GENOMICS	ss5221650791	Apr 26, 2021 (155)
32	TOMMO_GENOMICS	ss5221650792	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5221650793	Apr 26, 2021 (155)
34	TOMMO_GENOMICS	ss5221650794	Apr 26, 2021 (155)
35	TOMMO_GENOMICS	ss5221650795	Apr 26, 2021 (155)
36	1000G_HIGH_COVERAGE	ss5302549391	Oct 17, 2022 (156)
37	1000G_HIGH_COVERAGE	ss5302549392	Oct 17, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5302549394	Oct 17, 2022 (156)
39	1000G_HIGH_COVERAGE	ss5302549395	Oct 17, 2022 (156)
40	HUGCELL_USP	ss5495714085	Oct 17, 2022 (156)
41	HUGCELL_USP	ss5495714087	Oct 17, 2022 (156)
42	HUGCELL_USP	ss5495714088	Oct 17, 2022 (156)
43	HUGCELL_USP	ss5495714089	Oct 17, 2022 (156)
44	TOMMO_GENOMICS	ss5777290076	Oct 17, 2022 (156)
45	TOMMO_GENOMICS	ss5777290077	Oct 17, 2022 (156)
46	TOMMO_GENOMICS	ss5777290078	Oct 17, 2022 (156)
47	TOMMO_GENOMICS	ss5777290079	Oct 17, 2022 (156)
48	TOMMO_GENOMICS	ss5777290081	Oct 17, 2022 (156)
49	EVA	ss5913365041	Oct 17, 2022 (156)
50	1000Genomes	NC_000017.10 - 15011277	Oct 12, 2018 (152)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 502408808 (NC_000017.11:15107959::A 9019/85312) Row 502408809 (NC_000017.11:15107959::AA 29794/84950) Row 502408810 (NC_000017.11:15107959::AAA 2610/85312)...	-	Apr 26, 2021 (155)
60	Korean Genome Project Submission ignored due to conflicting rows: Row 34849349 (NC_000017.11:15107960::A 218/1786) Row 34849350 (NC_000017.11:15107960::AA 253/1786) Row 34849351 (NC_000017.11:15107959:A: 30/1786)...	-	Apr 27, 2020 (154)
61	Korean Genome Project Submission ignored due to conflicting rows: Row 34849349 (NC_000017.11:15107960::A 218/1786) Row 34849350 (NC_000017.11:15107960::AA 253/1786) Row 34849351 (NC_000017.11:15107959:A: 30/1786)...	-	Apr 27, 2020 (154)
62	Korean Genome Project Submission ignored due to conflicting rows: Row 34849349 (NC_000017.11:15107960::A 218/1786) Row 34849350 (NC_000017.11:15107960::AA 253/1786) Row 34849351 (NC_000017.11:15107959:A: 30/1786)...	-	Apr 27, 2020 (154)
63	Korean Genome Project Submission ignored due to conflicting rows: Row 34849349 (NC_000017.11:15107960::A 218/1786) Row 34849350 (NC_000017.11:15107960::AA 253/1786) Row 34849351 (NC_000017.11:15107959:A: 30/1786)...	-	Apr 27, 2020 (154)
64	Korean Genome Project Submission ignored due to conflicting rows: Row 34849349 (NC_000017.11:15107960::A 218/1786) Row 34849350 (NC_000017.11:15107960::AA 253/1786) Row 34849351 (NC_000017.11:15107959:A: 30/1786)...	-	Apr 27, 2020 (154)
65	8.3KJPN Submission ignored due to conflicting rows: Row 79620098 (NC_000017.10:15011276::AA 3170/16540) Row 79620099 (NC_000017.10:15011276::AAA 1090/16540) Row 79620100 (NC_000017.10:15011276::A 1421/16540)...	-	Apr 26, 2021 (155)
66	8.3KJPN Submission ignored due to conflicting rows: Row 79620098 (NC_000017.10:15011276::AA 3170/16540) Row 79620099 (NC_000017.10:15011276::AAA 1090/16540) Row 79620100 (NC_000017.10:15011276::A 1421/16540)...	-	Apr 26, 2021 (155)
67	8.3KJPN Submission ignored due to conflicting rows: Row 79620098 (NC_000017.10:15011276::AA 3170/16540) Row 79620099 (NC_000017.10:15011276::AAA 1090/16540) Row 79620100 (NC_000017.10:15011276::A 1421/16540)...	-	Apr 26, 2021 (155)
68	8.3KJPN Submission ignored due to conflicting rows: Row 79620098 (NC_000017.10:15011276::AA 3170/16540) Row 79620099 (NC_000017.10:15011276::AAA 1090/16540) Row 79620100 (NC_000017.10:15011276::A 1421/16540)...	-	Apr 26, 2021 (155)
69	8.3KJPN Submission ignored due to conflicting rows: Row 79620098 (NC_000017.10:15011276::AA 3170/16540) Row 79620099 (NC_000017.10:15011276::AAA 1090/16540) Row 79620100 (NC_000017.10:15011276::A 1421/16540)...	-	Apr 26, 2021 (155)
70	14KJPN Submission ignored due to conflicting rows: Row 111127180 (NC_000017.11:15107959::AAA 1920/28218) Row 111127181 (NC_000017.11:15107959::AA 5671/28218) Row 111127182 (NC_000017.11:15107959:A: 18/28218)...	-	Oct 17, 2022 (156)
71	14KJPN Submission ignored due to conflicting rows: Row 111127180 (NC_000017.11:15107959::AAA 1920/28218) Row 111127181 (NC_000017.11:15107959::AA 5671/28218) Row 111127182 (NC_000017.11:15107959:A: 18/28218)...	-	Oct 17, 2022 (156)
72	14KJPN Submission ignored due to conflicting rows: Row 111127180 (NC_000017.11:15107959::AAA 1920/28218) Row 111127181 (NC_000017.11:15107959::AA 5671/28218) Row 111127182 (NC_000017.11:15107959:A: 18/28218)...	-	Oct 17, 2022 (156)
73	14KJPN Submission ignored due to conflicting rows: Row 111127180 (NC_000017.11:15107959::AAA 1920/28218) Row 111127181 (NC_000017.11:15107959::AA 5671/28218) Row 111127182 (NC_000017.11:15107959:A: 18/28218)...	-	Oct 17, 2022 (156)
74	14KJPN Submission ignored due to conflicting rows: Row 111127180 (NC_000017.11:15107959::AAA 1920/28218) Row 111127181 (NC_000017.11:15107959::AA 5671/28218) Row 111127182 (NC_000017.11:15107959:A: 18/28218)...	-	Oct 17, 2022 (156)
75	ALFA	NC_000017.11 - 15107960	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4308502055	NC_000017.11:15107959:AAAAAAA:	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAA	(self)
10891358139	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAA	(self)
10891358139	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss4308502054	NC_000017.11:15107959:AAAA:	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss4308502053	NC_000017.11:15107959:AAA:	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3700156180, ss4308502052	NC_000017.11:15107959:AA:	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
10891358139	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3015253366, ss5221650794	NC_000017.10:15011276:A:	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3978471350, ss4308502051, ss5302549394, ss5495714089, ss5777290078	NC_000017.11:15107959:A:	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
10891358139	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3700156179	NC_000017.11:15107960:A:	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
71261783, ss947365532, ss1376431917, ss3788159832, ss3793126863, ss5221650793	NC_000017.10:15011276::A	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3819766937, ss4308502047, ss5302549391, ss5495714087, ss5777290079	NC_000017.11:15107959::A	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
10891358139	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3978471348	NC_000017.11:15107960::A	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3700156178	NC_000017.11:15107961::A	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss3834800273, ss5221650791	NC_000017.10:15011276::AA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss3650612259, ss4308502048, ss5302549392, ss5495714085, ss5777290077, ss5913365041	NC_000017.11:15107959::AA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
10891358139	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss3978471349	NC_000017.11:15107960::AA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss3700156177	NC_000017.11:15107961::AA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss80067715, ss81096112, ss95689905	NT_010718.16:14614666::AA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss5221650792	NC_000017.10:15011276::AAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss4308502049, ss5302549395, ss5495714088, ss5777290076	NC_000017.11:15107959::AAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
10891358139	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss3978471351	NC_000017.11:15107960::AAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss3700156176	NC_000017.11:15107961::AAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA	(self)
ss5221650795	NC_000017.10:15011276::AAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss4308502050, ss5777290081	NC_000017.11:15107959::AAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
10891358139	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)
ss3978471352	NC_000017.11:15107960::AAAA	NC_000017.11:15107959:AAAAAAAAAAAA… NC_000017.11:15107959:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs58057149

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs58057149